RNA–Protein interactions for RNA: ENST00000053243.5

TNFRSF17-201, Transcript of TNF receptor superfamily member 17, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene TNFRSF17, Length 994 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF17-201ENST00000053243 HMGXB3Q12766 1538 aa10.73□□□□□ -0.69
TNFRSF17-201ENST00000053243 ATAD2BQ9ULI0 1458 aa10.72□□□□□ -0.69
TNFRSF17-201ENST00000053243 CCDC88BA6NC98 1476 aa10.69□□□□□ -0.7
TNFRSF17-201ENST00000053243 MIER1Q8N108 512 aa10.67□□□□□ -0.7
TNFRSF17-201ENST00000053243 PLCD3Q8N3E9 789 aa10.67□□□□□ -0.7
TNFRSF17-201ENST00000053243 BAZ1BQ9UIG0 1483 aaKnown RBP10.67□□□□□ -0.7
TNFRSF17-201ENST00000053243 PRDM2Q13029 1718 aa10.64□□□□□ -0.71
TNFRSF17-201ENST00000053243 CREBZFQ9NS37 354 aa10.64□□□□□ -0.71
TNFRSF17-201ENST00000053243 NCAPD3P42695 1498 aa10.63□□□□□ -0.71
TNFRSF17-201ENST00000053243 FXR2P51116 673 aaKnown RBP eCLIP10.63□□□□□ -0.71
TNFRSF17-201ENST00000053243 CHADLQ6NUI6 762 aa10.62□□□□□ -0.71
TNFRSF17-201ENST00000053243 PIP4P2Q8N4L2 257 aa10.62□□□□□ -0.71
TNFRSF17-201ENST00000053243 PLEKHG5O94827 1062 aa10.6□□□□□ -0.71
TNFRSF17-201ENST00000053243 PRKAR2AP13861 404 aaKnown RBP10.59□□□□□ -0.71
TNFRSF17-201ENST00000053243 SLC24A1O60721 1099 aa10.57□□□□□ -0.72
TNFRSF17-201ENST00000053243 PKD2Q13563 968 aa10.56□□□□□ -0.72
TNFRSF17-201ENST00000053243 KLHL34Q8N239 644 aa10.56□□□□□ -0.72
TNFRSF17-201ENST00000053243 SPOCK2Q92563 424 aa10.54□□□□□ -0.72
TNFRSF17-201ENST00000053243 MNX1P50219 401 aaPredicted RBP10.53□□□□□ -0.72
TNFRSF17-201ENST00000053243 TRIM41Q8WV44 630 aa10.52□□□□□ -0.73
TNFRSF17-201ENST00000053243 ZBTB47Q9UFB7 747 aaPredicted RBP10.52□□□□□ -0.73
TNFRSF17-201ENST00000053243 ABCC8Q09428 1581 aa10.52□□□□□ -0.73
TNFRSF17-201ENST00000053243 CC2D2AQ9P2K1 1620 aa10.5□□□□□ -0.73
TNFRSF17-201ENST00000053243 BIVM-ERCC5R4GMW8 1640 aa10.5□□□□□ -0.73
TNFRSF17-201ENST00000053243 FARP1Q9Y4F1 1045 aaPredicted RBP10.49□□□□□ -0.73
TNFRSF17-201ENST00000053243 EEA1Q15075 1411 aa10.48□□□□□ -0.73
TNFRSF17-201ENST00000053243 TOP2BQ02880 1626 aa10.45□□□□□ -0.74
TNFRSF17-201ENST00000053243 SYNJ1O43426 1573 aa10.44□□□□□ -0.74
TNFRSF17-201ENST00000053243 WRNQ14191 1432 aaPredicted RBP eCLIP10.44□□□□□ -0.74
TNFRSF17-201ENST00000053243 NPM1P06748 294 aaKnown RBP eCLIP10.44□□□□□ -0.74
TNFRSF17-201ENST00000053243 CFTRP13569 1480 aa10.43□□□□□ -0.74
TNFRSF17-201ENST00000053243 NUBP1P53384 320 aa10.4□□□□□ -0.74
TNFRSF17-201ENST00000053243 KIF21BO75037 1637 aa10.37□□□□□ -0.75
TNFRSF17-201ENST00000053243 RASEFQ8IZ41 740 aa10.37□□□□□ -0.75
TNFRSF17-201ENST00000053243 ECM2O94769 699 aaPredicted RBP10.36□□□□□ -0.75
TNFRSF17-201ENST00000053243 FAM212AQ96EL1 285 aa10.33□□□□□ -0.76
TNFRSF17-201ENST00000053243 LAMC3Q9Y6N6 1575 aa10.32□□□□□ -0.76
TNFRSF17-201ENST00000053243 CIZ1Q9ULV3 898 aaPredicted RBP10.32□□□□□ -0.76
TNFRSF17-201ENST00000053243 CUX1P39880 1505 aa10.31□□□□□ -0.76
TNFRSF17-201ENST00000053243 CADPSQ9ULU8 1353 aa10.3□□□□□ -0.76
TNFRSF17-201ENST00000053243 LOC105371045A0A1W2PR82 267 aa10.3□□□□□ -0.76
TNFRSF17-201ENST00000053243 RGL2O15211 777 aa10.3□□□□□ -0.76
TNFRSF17-201ENST00000053243 CD44P16070 742 aaKnown RBP10.3□□□□□ -0.76
TNFRSF17-201ENST00000053243 DCAF8Q5TAQ9 597 aa10.3□□□□□ -0.76
TNFRSF17-201ENST00000053243 TSPYL2Q9H2G4 693 aaPredicted RBP10.3□□□□□ -0.76
TNFRSF17-201ENST00000053243 SOGA1O94964 1423 aa10.28□□□□□ -0.76
TNFRSF17-201ENST00000053243 GSE1Q14687 1217 aa10.28□□□□□ -0.76
TNFRSF17-201ENST00000053243 C19orf67A6NJJ6 358 aa10.27□□□□□ -0.77
TNFRSF17-201ENST00000053243 PAK3O75914 559 aaPredicted RBP10.27□□□□□ -0.77
TNFRSF17-201ENST00000053243 PLCB2Q00722 1185 aa10.27□□□□□ -0.77
TNFRSF17-201ENST00000053243 GOLGA3Q08378 1498 aa10.27□□□□□ -0.77
TNFRSF17-201ENST00000053243 CEP164Q9UPV0 1460 aa10.27□□□□□ -0.77
TNFRSF17-201ENST00000053243 ERICH3Q5RHP9 1530 aa10.27□□□□□ -0.77
TNFRSF17-201ENST00000053243 HAX1O00165 279 aa10.26□□□□□ -0.77
TNFRSF17-201ENST00000053243 RUSC2Q8N2Y8 1516 aa10.24□□□□□ -0.77
TNFRSF17-201ENST00000053243 DNMBPQ6XZF7 1577 aa10.24□□□□□ -0.77
TNFRSF17-201ENST00000053243 ZRANB1Q9UGI0 708 aa10.24□□□□□ -0.77
TNFRSF17-201ENST00000053243 TNIKQ9UKE5 1360 aa10.24□□□□□ -0.77
TNFRSF17-201ENST00000053243 CCDC61Q9Y6R9 512 aa10.22□□□□□ -0.77
TNFRSF17-201ENST00000053243 FAM9AQ8IZU1 332 aaPredicted RBP10.21□□□□□ -0.77
TNFRSF17-201ENST00000053243 FANCD2Q9BXW9 1451 aa10.21□□□□□ -0.78
TNFRSF17-201ENST00000053243 WDR97A6NE52 1622 aa10.21□□□□□ -0.78
TNFRSF17-201ENST00000053243 EVX2Q03828 476 aa10.2□□□□□ -0.78
TNFRSF17-201ENST00000053243 PYGBP11216 843 aa10.19□□□□□ -0.78
TNFRSF17-201ENST00000053243 SP7Q8TDD2 431 aaPredicted RBP10.18□□□□□ -0.78
TNFRSF17-201ENST00000053243 PRXQ9BXM0 1461 aa10.17□□□□□ -0.78
TNFRSF17-201ENST00000053243 CEP162Q5TB80 1403 aa10.17□□□□□ -0.78
TNFRSF17-201ENST00000053243 KIF27Q86VH2 1401 aa10.17□□□□□ -0.78
TNFRSF17-201ENST00000053243 BBXQ8WY36 941 aaPredicted RBP10.17□□□□□ -0.78
TNFRSF17-201ENST00000053243 PHF12Q96QT6 1004 aa10.17□□□□□ -0.78
TNFRSF17-201ENST00000053243 KIF21AQ7Z4S6 1674 aa10.17□□□□□ -0.78
TNFRSF17-201ENST00000053243 RNF25Q96BH1 459 aaPredicted RBP10.16□□□□□ -0.78
TNFRSF17-201ENST00000053243 FGD5Q6ZNL6 1462 aa10.16□□□□□ -0.78
TNFRSF17-201ENST00000053243 ZNF579Q8NAF0 562 aaKnown RBP10.15□□□□□ -0.78
TNFRSF17-201ENST00000053243 TOPBP1Q92547 1522 aa10.15□□□□□ -0.78
TNFRSF17-201ENST00000053243 CUL7Q14999 1698 aa10.14□□□□□ -0.79
TNFRSF17-201ENST00000053243 PDS5BQ9NTI5 1447 aa10.13□□□□□ -0.79
TNFRSF17-201ENST00000053243 ABCA10Q8WWZ4 1543 aa10.12□□□□□ -0.79
TNFRSF17-201ENST00000053243 NESP48681 1621 aa10.12□□□□□ -0.79
TNFRSF17-201ENST00000053243 RAPGEF2Q9Y4G8 1499 aa10.11□□□□□ -0.79
TNFRSF17-201ENST00000053243 CHRM1P11229 460 aaPredicted RBP10.11□□□□□ -0.79
TNFRSF17-201ENST00000053243 KIF12Q96FN5 646 aa10.1□□□□□ -0.79
TNFRSF17-201ENST00000053243 ABCA5Q8WWZ7 1642 aa10.1□□□□□ -0.79
TNFRSF17-201ENST00000053243 POLA1P09884 1462 aaPredicted RBP10.1□□□□□ -0.79
TNFRSF17-201ENST00000053243 MAP3K13O43283 966 aa10.09□□□□□ -0.79
TNFRSF17-201ENST00000053243 CHGAP10645 457 aaKnown RBP10.09□□□□□ -0.79
TNFRSF17-201ENST00000053243 HAP1P54257 671 aaPredicted RBP10.09□□□□□ -0.79
TNFRSF17-201ENST00000053243 TRIM26Q12899 539 aaPredicted RBP10.09□□□□□ -0.79
TNFRSF17-201ENST00000053243 URB2Q14146 1524 aaKnown RBP10.08□□□□□ -0.8
TNFRSF17-201ENST00000053243 ZBTB4Q9P1Z0 1013 aaPredicted RBP10.08□□□□□ -0.8
TNFRSF17-201ENST00000053243 CUX2O14529 1486 aa10.08□□□□□ -0.8
TNFRSF17-201ENST00000053243 CTTNBP2Q8WZ74 1663 aa10.08□□□□□ -0.8
TNFRSF17-201ENST00000053243 PCDHB13Q9Y5F0 798 aa10.07□□□□□ -0.8
TNFRSF17-201ENST00000053243 PAXIP1Q6ZW49 1069 aaPredicted RBP10.06□□□□□ -0.8
TNFRSF17-201ENST00000053243 TARBP1Q13395 1621 aaKnown RBP10.05□□□□□ -0.8
TNFRSF17-201ENST00000053243 RIOK3O14730 519 aaKnown RBP10.05□□□□□ -0.8
TNFRSF17-201ENST00000053243 HS6ST3Q8IZP7 471 aa10.05□□□□□ -0.8
TNFRSF17-201ENST00000053243 MS4A3Q96HJ5 214 aa10.05□□□□□ -0.8
TNFRSF17-201ENST00000053243 CLIP1P30622 1438 aa10.05□□□□□ -0.8
TNFRSF17-201ENST00000053243 IFNL1Q8IU54 200 aa10.04□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms