RNA–Protein interactions for RNA: ENST00000011473.6

SYPL1-201, Transcript of synaptophysin like 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SYPL1, Length 2,127 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYPL1-201ENST00000011473 KIAA0586Q9BVV6 1533 aa19.9■□□□□ 0.78
SYPL1-201ENST00000011473 JPH4Q96JJ6 628 aa19.9■□□□□ 0.78
SYPL1-201ENST00000011473 RIMBP3CA6NJZ7 1639 aa19.89■□□□□ 0.77
SYPL1-201ENST00000011473 RIMBP3BA6NNM3 1639 aa19.89■□□□□ 0.77
SYPL1-201ENST00000011473 RIMBP3Q9UFD9 1639 aa19.89■□□□□ 0.77
SYPL1-201ENST00000011473 ERCC6L2Q5T890 1561 aa19.87■□□□□ 0.77
SYPL1-201ENST00000011473 PRG4Q92954 1404 aaPredicted RBP19.84■□□□□ 0.77
SYPL1-201ENST00000011473 SHROOM2Q13796 1616 aa19.83■□□□□ 0.77
SYPL1-201ENST00000011473 IQGAP2Q13576 1575 aa19.83■□□□□ 0.76
SYPL1-201ENST00000011473 KIF21BO75037 1637 aa19.82■□□□□ 0.76
SYPL1-201ENST00000011473 CYB5RLQ6IPT4 315 aa19.81■□□□□ 0.76
SYPL1-201ENST00000011473 ARAP1Q96P48 1450 aa19.8■□□□□ 0.76
SYPL1-201ENST00000011473 RANGAP1P46060 587 aaPredicted RBP19.78■□□□□ 0.76
SYPL1-201ENST00000011473 UBTFP17480 764 aaKnown RBP19.78■□□□□ 0.76
SYPL1-201ENST00000011473 GOLGA3Q08378 1498 aa19.77■□□□□ 0.75
SYPL1-201ENST00000011473 CTTNBP2Q8WZ74 1663 aa19.76■□□□□ 0.75
SYPL1-201ENST00000011473 TTBK1Q5TCY1 1321 aaPredicted RBP19.74■□□□□ 0.75
SYPL1-201ENST00000011473 DISP1Q96F81 1524 aa19.7■□□□□ 0.74
SYPL1-201ENST00000011473 UGGT2Q9NYU1 1516 aa19.7■□□□□ 0.74
SYPL1-201ENST00000011473 CARMIL2Q6F5E8 1435 aa19.68■□□□□ 0.74
SYPL1-201ENST00000011473 P3H3Q8IVL6 736 aa19.67■□□□□ 0.74
SYPL1-201ENST00000011473 LOC105371045A0A1W2PR82 267 aa19.65■□□□□ 0.74
SYPL1-201ENST00000011473 KIAA0556O60303 1618 aa19.64■□□□□ 0.73
SYPL1-201ENST00000011473 TNIKQ9UKE5 1360 aa19.62■□□□□ 0.73
SYPL1-201ENST00000011473 PTPRGP23470 1445 aa19.61■□□□□ 0.73
SYPL1-201ENST00000011473 SAMD9Q5K651 1589 aa19.55■□□□□ 0.72
SYPL1-201ENST00000011473 FHOD3Q2V2M9 1422 aa19.55■□□□□ 0.72
SYPL1-201ENST00000011473 ARHGAP35Q9NRY4 1499 aa19.5■□□□□ 0.71
SYPL1-201ENST00000011473 PLB1Q6P1J6 1458 aa19.5■□□□□ 0.71
SYPL1-201ENST00000011473 ADCY10Q96PN6 1610 aa19.49■□□□□ 0.71
SYPL1-201ENST00000011473 EFCAB5A4FU69 1503 aa19.48■□□□□ 0.71
SYPL1-201ENST00000011473 UACAQ9BZF9 1416 aa19.47■□□□□ 0.71
SYPL1-201ENST00000011473 CLIP1P30622 1438 aa19.45■□□□□ 0.7
SYPL1-201ENST00000011473 ARID3CA6NKF2 412 aa19.44■□□□□ 0.7
SYPL1-201ENST00000011473 CEP162Q5TB80 1403 aa19.42■□□□□ 0.7
SYPL1-201ENST00000011473 ABCC2Q92887 1545 aa19.42■□□□□ 0.7
SYPL1-201ENST00000011473 NPM1P06748 294 aaKnown RBP eCLIP19.41■□□□□ 0.7
SYPL1-201ENST00000011473 ABCA8O94911 1581 aa19.4■□□□□ 0.7
SYPL1-201ENST00000011473 UHRF1BP1LA0JNW5 1464 aa19.39■□□□□ 0.69
SYPL1-201ENST00000011473 TRHP20396 242 aaPredicted RBP19.34■□□□□ 0.69
SYPL1-201ENST00000011473 ATP1B4Q9UN42 357 aaPredicted RBP19.34■□□□□ 0.69
SYPL1-201ENST00000011473 FMN1Q68DA7 1419 aa19.34■□□□□ 0.69
SYPL1-201ENST00000011473 RAPGEF6Q8TEU7 1601 aa19.33■□□□□ 0.69
SYPL1-201ENST00000011473 KDM5BQ9UGL1 1544 aa19.33■□□□□ 0.69
SYPL1-201ENST00000011473 NUP153P49790 1475 aaKnown RBP19.31■□□□□ 0.68
SYPL1-201ENST00000011473 ZCCHC11Q5TAX3 1644 aaKnown RBP19.3■□□□□ 0.68
SYPL1-201ENST00000011473 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP19.29■□□□□ 0.68
SYPL1-201ENST00000011473 HNRNPUL2Q1KMD3 747 aaKnown RBP19.29■□□□□ 0.68
SYPL1-201ENST00000011473 ATP10BO94823 1461 aa19.28■□□□□ 0.68
SYPL1-201ENST00000011473 MAPKBP1O60336 1514 aa19.28■□□□□ 0.68
SYPL1-201ENST00000011473 ASXL2Q76L83 1435 aa19.28■□□□□ 0.68
SYPL1-201ENST00000011473 PCF11O94913 1555 aaKnown RBP19.24■□□□□ 0.67
SYPL1-201ENST00000011473 CDK13Q14004 1512 aaKnown RBP19.23■□□□□ 0.67
SYPL1-201ENST00000011473 FAM69CQ0P6D2 419 aa19.22■□□□□ 0.67
SYPL1-201ENST00000011473 CASKIN1Q8WXD9 1431 aa19.21■□□□□ 0.67
SYPL1-201ENST00000011473 HECW1Q76N89 1606 aa19.2■□□□□ 0.66
SYPL1-201ENST00000011473 KCNH8Q96L42 1107 aa19.2■□□□□ 0.66
SYPL1-201ENST00000011473 ABCC10Q5T3U5 1492 aa19.2■□□□□ 0.66
SYPL1-201ENST00000011473 EPRSP07814 1512 aaKnown RBP19.19■□□□□ 0.66
SYPL1-201ENST00000011473 WDR7Q9Y4E6 1490 aa19.19■□□□□ 0.66
SYPL1-201ENST00000011473 DIP2BQ9P265 1576 aa19.17■□□□□ 0.66
SYPL1-201ENST00000011473 FYCO1Q9BQS8 1478 aa19.17■□□□□ 0.66
SYPL1-201ENST00000011473 VPS8Q8N3P4 1428 aa19.15■□□□□ 0.66
SYPL1-201ENST00000011473 LRRIQ1Q96JM4 1722 aa19.15■□□□□ 0.66
SYPL1-201ENST00000011473 PLEKHD1A6NEE1 506 aa19.13■□□□□ 0.65
SYPL1-201ENST00000011473 KIF13AQ9H1H9 1805 aa19.12■□□□□ 0.65
SYPL1-201ENST00000011473 CCDC18Q5T9S5 1454 aa19.09■□□□□ 0.65
SYPL1-201ENST00000011473 CDK11AQ9UQ88 783 aaPredicted RBP19.07■□□□□ 0.64
SYPL1-201ENST00000011473 MAGI3Q5TCQ9 1506 aa19.05■□□□□ 0.64
SYPL1-201ENST00000011473 GLI2P10070 1586 aa19.05■□□□□ 0.64
SYPL1-201ENST00000011473 TROQ12816 1431 aaPredicted RBP19.03■□□□□ 0.64
SYPL1-201ENST00000011473 CD109Q6YHK3 1445 aa19.01■□□□□ 0.63
SYPL1-201ENST00000011473 TSPOAP1O95153 1857 aa19.01■□□□□ 0.63
SYPL1-201ENST00000011473 MAP3K4Q9Y6R4 1608 aa19■□□□□ 0.63
SYPL1-201ENST00000011473 KIF14Q15058 1648 aa18.99■□□□□ 0.63
SYPL1-201ENST00000011473 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP18.99■□□□□ 0.63
SYPL1-201ENST00000011473 MTUS2Q5JR59 1369 aa18.98■□□□□ 0.63
SYPL1-201ENST00000011473 TTC37Q6PGP7 1564 aa18.97■□□□□ 0.63
SYPL1-201ENST00000011473 ABCA9Q8IUA7 1624 aa18.97■□□□□ 0.63
SYPL1-201ENST00000011473 TIAM1Q13009 1591 aa18.96■□□□□ 0.63
SYPL1-201ENST00000011473 KANK4Q5T7N3 995 aaPredicted RBP18.95■□□□□ 0.62
SYPL1-201ENST00000011473 PPRC1Q5VV67 1664 aaKnown RBP18.95■□□□□ 0.62
SYPL1-201ENST00000011473 CFAP43Q8NDM7 1665 aa18.94■□□□□ 0.62
SYPL1-201ENST00000011473 APLP2Q06481 763 aa18.93■□□□□ 0.62
SYPL1-201ENST00000011473 LRRC9Q6ZRR7 1453 aa18.9■□□□□ 0.62
SYPL1-201ENST00000011473 EHBP1L1Q8N3D4 1523 aa18.9■□□□□ 0.62
SYPL1-201ENST00000011473 TEX14Q8IWB6 1497 aa18.89■□□□□ 0.61
SYPL1-201ENST00000011473 MAP3K1Q13233 1512 aa18.87■□□□□ 0.61
SYPL1-201ENST00000011473 PLCH2O75038 1416 aa18.86■□□□□ 0.61
SYPL1-201ENST00000011473 PPARGC1BQ86YN6 1023 aaKnown RBP18.85■□□□□ 0.61
SYPL1-201ENST00000011473 FANCAO15360 1455 aa18.85■□□□□ 0.61
SYPL1-201ENST00000011473 COL17A1Q9UMD9 1497 aaPredicted RBP18.85■□□□□ 0.61
SYPL1-201ENST00000011473 NCOA2Q15596 1464 aa18.83■□□□□ 0.61
SYPL1-201ENST00000011473 CCNB3Q8WWL7 1395 aa18.82■□□□□ 0.6
SYPL1-201ENST00000011473 ARHGAP5Q13017 1502 aa18.82■□□□□ 0.6
SYPL1-201ENST00000011473 KDM6BO15054 1643 aa18.82■□□□□ 0.6
SYPL1-201ENST00000011473 MYO5CQ9NQX4 1742 aa18.81■□□□□ 0.6
SYPL1-201ENST00000011473 GPATCH8Q9UKJ3 1502 aaKnown RBP18.81■□□□□ 0.6
SYPL1-201ENST00000011473 EFCAB2Q5VUJ9 269 aa18.8■□□□□ 0.6
SYPL1-201ENST00000011473 ZNF777Q9ULD5 760 aaPredicted RBP18.8■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 525.5 ms