RNA–Protein interactions for RNA: ENSMUST00000177145.7

Cpsf6-208, Transcript of Cleavage and polyadenylation specificity factor subunit 6, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Cpsf6, Length 3,819 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Cpsf6-208ENSMUST00000177145 Fmn1Q05860 1466 aa12.72□□□□□ -0.37
Cpsf6-208ENSMUST00000177145 AqrQ8CFQ3 1481 aaKnown RBP12.72□□□□□ -0.37
Cpsf6-208ENSMUST00000177145 Chic1Q8CBW7 227 aa12.69□□□□□ -0.38
Cpsf6-208ENSMUST00000177145 Chd1P40201 1711 aa12.68□□□□□ -0.38
Cpsf6-208ENSMUST00000177145 Setbp1Q9Z180 1582 aa12.68□□□□□ -0.38
Cpsf6-208ENSMUST00000177145 CenpbP27790 599 aa12.67□□□□□ -0.38
Cpsf6-208ENSMUST00000177145 Efcab5A0JP43 1406 aa12.67□□□□□ -0.38
Cpsf6-208ENSMUST00000177145 Gapvd1Q6PAR5 1458 aa12.67□□□□□ -0.38
Cpsf6-208ENSMUST00000177145 PtprkP35822 1457 aa12.66□□□□□ -0.38
Cpsf6-208ENSMUST00000177145 Csrnp3P59055 597 aa12.66□□□□□ -0.38
Cpsf6-208ENSMUST00000177145 DiexfQ8BTT6 772 aaKnown RBP12.65□□□□□ -0.38
Cpsf6-208ENSMUST00000177145 Grin2aP35436 1464 aa12.65□□□□□ -0.38
Cpsf6-208ENSMUST00000177145 Ccdc88bQ4QRL3 1481 aa12.64□□□□□ -0.39
Cpsf6-208ENSMUST00000177145 Dnmt1P13864 1620 aaKnown RBP12.62□□□□□ -0.39
Cpsf6-208ENSMUST00000177145 Fgd6Q69ZL1 1399 aa12.61□□□□□ -0.39
Cpsf6-208ENSMUST00000177145 Gm156Q58A37 223 aa12.6□□□□□ -0.39
Cpsf6-208ENSMUST00000177145 Gab3Q8BSM5 595 aa12.6□□□□□ -0.39
Cpsf6-208ENSMUST00000177145 Abcc1O35379 1528 aa12.59□□□□□ -0.39
Cpsf6-208ENSMUST00000177145 Rapgef2Q8CHG7 1496 aa12.59□□□□□ -0.39
Cpsf6-208ENSMUST00000177145 Pla2r1Q62028 1487 aa12.58□□□□□ -0.4
Cpsf6-208ENSMUST00000177145 NrkQ9R0G8 1455 aa12.57□□□□□ -0.4
Cpsf6-208ENSMUST00000177145 Abcc2Q8VI47 1543 aa12.56□□□□□ -0.4
Cpsf6-208ENSMUST00000177145 1700123L14RikQ3V2K7 440 aa12.56□□□□□ -0.4
Cpsf6-208ENSMUST00000177145 NefmP08553 848 aa12.55□□□□□ -0.4
Cpsf6-208ENSMUST00000177145 Map3k4O08648 1597 aa12.55□□□□□ -0.4
Cpsf6-208ENSMUST00000177145 Rad54l2Q99NG0 1466 aa12.55□□□□□ -0.4
Cpsf6-208ENSMUST00000177145 Arhgef12Q8R4H2 1543 aaKnown RBP12.53□□□□□ -0.4
Cpsf6-208ENSMUST00000177145 BC005561E9Q5E2 1589 aa12.53□□□□□ -0.4
Cpsf6-208ENSMUST00000177145 Pelp1Q9DBD5 1123 aaKnown RBP12.53□□□□□ -0.4
Cpsf6-208ENSMUST00000177145 EprsQ8CGC7 1512 aaKnown RBP12.53□□□□□ -0.4
Cpsf6-208ENSMUST00000177145 Abca16E9PWJ7 1678 aa12.52□□□□□ -0.4
Cpsf6-208ENSMUST00000177145 SynmQ70IV5 1561 aa12.51□□□□□ -0.41
Cpsf6-208ENSMUST00000177145 Mier1Q5UAK0 511 aa12.51□□□□□ -0.41
Cpsf6-208ENSMUST00000177145 Top2aQ01320 1528 aaKnown RBP12.5□□□□□ -0.41
Cpsf6-208ENSMUST00000177145 Ythdc2B2RR83 1445 aaKnown RBP12.5□□□□□ -0.41
Cpsf6-208ENSMUST00000177145 Il27Q8K3I6 234 aa12.48□□□□□ -0.41
Cpsf6-208ENSMUST00000177145 Adamts12Q811B3 1600 aa12.48□□□□□ -0.41
Cpsf6-208ENSMUST00000177145 CadpsQ80TJ1 1355 aa12.47□□□□□ -0.41
Cpsf6-208ENSMUST00000177145 Neo1P97798 1493 aa12.46□□□□□ -0.41
Cpsf6-208ENSMUST00000177145 Ak9G3UYQ4 1894 aa12.45□□□□□ -0.42
Cpsf6-208ENSMUST00000177145 Clasp1Q80TV8 1535 aaKnown RBP12.44□□□□□ -0.42
Cpsf6-208ENSMUST00000177145 AI481877A2ALV5 1481 aa12.44□□□□□ -0.42
Cpsf6-208ENSMUST00000177145 Shroom4Q1W617 1475 aa12.44□□□□□ -0.42
Cpsf6-208ENSMUST00000177145 Ttc37F8VPK0 1563 aa12.42□□□□□ -0.42
Cpsf6-208ENSMUST00000177145 Slx4Q6P1D7 1565 aa12.42□□□□□ -0.42
Cpsf6-208ENSMUST00000177145 AdgbG3UZ78 1657 aa12.41□□□□□ -0.42
Cpsf6-208ENSMUST00000177145 Eif4g1Q6NZJ6 1600 aaKnown RBP12.41□□□□□ -0.42
Cpsf6-208ENSMUST00000177145 Sall2Q9QX96 1004 aa12.4□□□□□ -0.42
Cpsf6-208ENSMUST00000177145 Alpk3Q924C5 1678 aa12.4□□□□□ -0.42
Cpsf6-208ENSMUST00000177145 Mapkbp1Q6NS57 1503 aa12.38□□□□□ -0.43
Cpsf6-208ENSMUST00000177145 WizO88286 1684 aaKnown RBP12.38□□□□□ -0.43
Cpsf6-208ENSMUST00000177145 PxdnQ3UQ28 1475 aa12.37□□□□□ -0.43
Cpsf6-208ENSMUST00000177145 TchhA0A0B4J1F9 1599 aa12.37□□□□□ -0.43
Cpsf6-208ENSMUST00000177145 Cdk11bP24788 784 aaKnown RBP12.36□□□□□ -0.43
Cpsf6-208ENSMUST00000177145 Arhgef11Q68FM7 1552 aa12.34□□□□□ -0.43
Cpsf6-208ENSMUST00000177145 Nop58Q6DFW4 536 aaKnown RBP12.32□□□□□ -0.44
Cpsf6-208ENSMUST00000177145 Abca5Q8K448 1642 aa12.32□□□□□ -0.44
Cpsf6-208ENSMUST00000177145 Gm14025A2AP89 1413 aa12.31□□□□□ -0.44
Cpsf6-208ENSMUST00000177145 AknaQ80VW7 1404 aa12.31□□□□□ -0.44
Cpsf6-208ENSMUST00000177145 Soga1E1U8D0 1418 aa12.29□□□□□ -0.44
Cpsf6-208ENSMUST00000177145 Map3k1P53349 1493 aa12.27□□□□□ -0.44
Cpsf6-208ENSMUST00000177145 Mroh2bQ7M6Y6 1581 aa12.27□□□□□ -0.45
Cpsf6-208ENSMUST00000177145 Lrrc9Q8CDN9 1456 aa12.27□□□□□ -0.45
Cpsf6-208ENSMUST00000177145 Cul7Q8VE73 1689 aa12.25□□□□□ -0.45
Cpsf6-208ENSMUST00000177145 Rrbp1Q99PL5 1605 aaKnown RBP12.25□□□□□ -0.45
Cpsf6-208ENSMUST00000177145 Kdm5bQ80Y84 1544 aa12.25□□□□□ -0.45
Cpsf6-208ENSMUST00000177145 Mapk8ip2Q9ERE9 830 aa12.24□□□□□ -0.45
Cpsf6-208ENSMUST00000177145 Zfyve16Q80U44 1528 aa12.24□□□□□ -0.45
Cpsf6-208ENSMUST00000177145 Myt1Q8CFC2 1127 aa12.23□□□□□ -0.45
Cpsf6-208ENSMUST00000177145 UbtfP25976 765 aaKnown RBP12.23□□□□□ -0.45
Cpsf6-208ENSMUST00000177145 Cep162Q6ZQ06 1403 aa12.23□□□□□ -0.45
Cpsf6-208ENSMUST00000177145 Plppr3Q7TPB0 716 aa12.22□□□□□ -0.45
Cpsf6-208ENSMUST00000177145 Anks4bQ8K3X6 423 aa12.22□□□□□ -0.45
Cpsf6-208ENSMUST00000177145 NhsB1AV60 1647 aa12.21□□□□□ -0.45
Cpsf6-208ENSMUST00000177145 Amer1Q7TS75 1132 aa12.21□□□□□ -0.45
Cpsf6-208ENSMUST00000177145 Bcl11aQ9QYE3 773 aa12.21□□□□□ -0.45
Cpsf6-208ENSMUST00000177145 AglF8VPN4 1532 aa12.2□□□□□ -0.46
Cpsf6-208ENSMUST00000177145 Depdc5P61460 1591 aa12.17□□□□□ -0.46
Cpsf6-208ENSMUST00000177145 Aebp2Q9Z248 504 aaKnown RBP12.16□□□□□ -0.46
Cpsf6-208ENSMUST00000177145 Kiaa1210E9Q0C6 1637 aa12.16□□□□□ -0.46
Cpsf6-208ENSMUST00000177145 Igf1rQ60751 1373 aa12.15□□□□□ -0.46
Cpsf6-208ENSMUST00000177145 Fndc1E9Q043 1732 aa12.15□□□□□ -0.47
Cpsf6-208ENSMUST00000177145 Gm7298A0A0N4SVU1 1476 aa12.14□□□□□ -0.47
Cpsf6-208ENSMUST00000177145 ClspnQ80YR7 1315 aa12.13□□□□□ -0.47
Cpsf6-208ENSMUST00000177145 Slc24a1Q91WD8 1130 aa12.12□□□□□ -0.47
Cpsf6-208ENSMUST00000177145 Znf608Q56A10 1511 aa12.12□□□□□ -0.47
Cpsf6-208ENSMUST00000177145 Jph4Q80WT0 628 aa12.11□□□□□ -0.47
Cpsf6-208ENSMUST00000177145 Arhgap27A2AB59 869 aa12.1□□□□□ -0.47
Cpsf6-208ENSMUST00000177145 Wdr7Q920I9 1489 aa12.1□□□□□ -0.47
Cpsf6-208ENSMUST00000177145 Brwd3A2AHJ4 1799 aa12.1□□□□□ -0.47
Cpsf6-208ENSMUST00000177145 Kiaa0556Q8C753 1610 aa12.09□□□□□ -0.47
Cpsf6-208ENSMUST00000177145 Myt1lP97500 1187 aa12.09□□□□□ -0.47
Cpsf6-208ENSMUST00000177145 Polr1aO35134 1717 aaKnown RBP12.08□□□□□ -0.47
Cpsf6-208ENSMUST00000177145 Carmil1Q6EDY6 1374 aa12.08□□□□□ -0.48
Cpsf6-208ENSMUST00000177145 Fam71e1A1L3C1 212 aa12.08□□□□□ -0.48
Cpsf6-208ENSMUST00000177145 Gcc2Q8CHG3 1679 aa12.08□□□□□ -0.48
Cpsf6-208ENSMUST00000177145 Aplp2Q06335 707 aa12.07□□□□□ -0.48
Cpsf6-208ENSMUST00000177145 Ncapd3Q6ZQK0 1506 aa12.07□□□□□ -0.48
Cpsf6-208ENSMUST00000177145 Abca8bQ8K440 1620 aa12.06□□□□□ -0.48
Cpsf6-208ENSMUST00000177145 Ppp1r18Q8BQ30 594 aa12.06□□□□□ -0.48
Retrieved 100 of 22,080 RNA–protein pairs in 25.5 ms