RNA–Protein interactions for RNA: ENSMUST00000173722.7

Lig3-211, Transcript of DNA ligase 3, mousemouse

APPRIS P3 TSL 5 BASIC

Gene Lig3, Length 5,797 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Lig3-211ENSMUST00000173722 Slc4a1apE9PX68 744 aa12.16□□□□□ -0.46
Lig3-211ENSMUST00000173722 Cux2P70298 1426 aa12.16□□□□□ -0.46
Lig3-211ENSMUST00000173722 Dnajc5bQ9CQ94 199 aa12.15□□□□□ -0.47
Lig3-211ENSMUST00000173722 CftrP26361 1476 aa12.14□□□□□ -0.47
Lig3-211ENSMUST00000173722 Iqgap2Q3UQ44 1575 aa12.12□□□□□ -0.47
Lig3-211ENSMUST00000173722 TonslQ6NZL6 1363 aa12.12□□□□□ -0.47
Lig3-211ENSMUST00000173722 Fgd1P52734 960 aa12.11□□□□□ -0.47
Lig3-211ENSMUST00000173722 Smarca2Q6DIC0 1577 aa12.1□□□□□ -0.47
Lig3-211ENSMUST00000173722 Arhgap27A2AB59 869 aa12.09□□□□□ -0.47
Lig3-211ENSMUST00000173722 BicraF8VPZ9 1578 aa12.08□□□□□ -0.48
Lig3-211ENSMUST00000173722 Plekhg3Q4VAC9 1341 aa12.05□□□□□ -0.48
Lig3-211ENSMUST00000173722 Synj1Q8CHC4 1574 aa12.03□□□□□ -0.48
Lig3-211ENSMUST00000173722 DekQ7TNV0 380 aaKnown RBP12.03□□□□□ -0.48
Lig3-211ENSMUST00000173722 Vsig10D3YX43 558 aa12.02□□□□□ -0.49
Lig3-211ENSMUST00000173722 Irx6Q9ER75 438 aa12.01□□□□□ -0.49
Lig3-211ENSMUST00000173722 Clstn1Q9EPL2 979 aa12.01□□□□□ -0.49
Lig3-211ENSMUST00000173722 Prm3Q62100 101 aa12.01□□□□□ -0.49
Lig3-211ENSMUST00000173722 PnnO35691 725 aaKnown RBP12□□□□□ -0.49
Lig3-211ENSMUST00000173722 Anp32aO35381 247 aa11.98□□□□□ -0.49
Lig3-211ENSMUST00000173722 P3h3Q8CG70 732 aa11.98□□□□□ -0.49
Lig3-211ENSMUST00000173722 Rtn4Q99P72 1162 aaKnown RBP11.97□□□□□ -0.49
Lig3-211ENSMUST00000173722 Clip1Q922J3 1391 aa11.96□□□□□ -0.5
Lig3-211ENSMUST00000173722 Cttnbp2B9EJA2 1648 aa11.94□□□□□ -0.5
Lig3-211ENSMUST00000173722 AknaQ80VW7 1404 aa11.94□□□□□ -0.5
Lig3-211ENSMUST00000173722 Noc3lQ8VI84 807 aaKnown RBP11.94□□□□□ -0.5
Lig3-211ENSMUST00000173722 Csrnp3P59055 597 aa11.94□□□□□ -0.5
Lig3-211ENSMUST00000173722 Ppp1r18Q8BQ30 594 aa11.94□□□□□ -0.5
Lig3-211ENSMUST00000173722 Anks4bQ8K3X6 423 aa11.94□□□□□ -0.5
Lig3-211ENSMUST00000173722 Trim44Q9QXA7 346 aa11.94□□□□□ -0.5
Lig3-211ENSMUST00000173722 Pabpn1Q8CCS6 302 aaKnown RBP11.92□□□□□ -0.5
Lig3-211ENSMUST00000173722 Fmn1Q05860 1466 aa11.92□□□□□ -0.5
Lig3-211ENSMUST00000173722 Mier1Q5UAK0 511 aa11.91□□□□□ -0.5
Lig3-211ENSMUST00000173722 Dhx29Q6PGC1 1365 aaKnown RBP11.9□□□□□ -0.5
Lig3-211ENSMUST00000173722 ClspnQ80YR7 1315 aa11.9□□□□□ -0.5
Lig3-211ENSMUST00000173722 Frmpd1A2AKB4 1549 aa11.89□□□□□ -0.51
Lig3-211ENSMUST00000173722 Cc2d2aQ8CFW7 1633 aa11.89□□□□□ -0.51
Lig3-211ENSMUST00000173722 Mrc2Q64449 1479 aa11.89□□□□□ -0.51
Lig3-211ENSMUST00000173722 LrpprcQ6PB66 1392 aaKnown RBP11.89□□□□□ -0.51
Lig3-211ENSMUST00000173722 Aplp2Q06335 707 aa11.87□□□□□ -0.51
Lig3-211ENSMUST00000173722 Setd5Q5XJV7 1441 aa11.85□□□□□ -0.51
Lig3-211ENSMUST00000173722 Pes1Q9EQ61 584 aaKnown RBP11.84□□□□□ -0.51
Lig3-211ENSMUST00000173722 Arid3cA6PWV5 409 aa11.84□□□□□ -0.51
Lig3-211ENSMUST00000173722 Rad21Q61550 635 aaKnown RBP11.83□□□□□ -0.52
Lig3-211ENSMUST00000173722 Ggt6Q6PDE7 497 aa11.83□□□□□ -0.52
Lig3-211ENSMUST00000173722 Ccdc88bQ4QRL3 1481 aa11.82□□□□□ -0.52
Lig3-211ENSMUST00000173722 PtmaP26350 111 aa11.81□□□□□ -0.52
Lig3-211ENSMUST00000173722 Trim26Q99PN3 545 aa11.81□□□□□ -0.52
Lig3-211ENSMUST00000173722 MyclP10166 368 aa11.79□□□□□ -0.52
Lig3-211ENSMUST00000173722 BlmO88700 1416 aa11.79□□□□□ -0.52
Lig3-211ENSMUST00000173722 Wdr62Q3U3T8 1523 aa11.78□□□□□ -0.52
Lig3-211ENSMUST00000173722 Eif4g2Q62448 906 aaKnown RBP11.78□□□□□ -0.52
Lig3-211ENSMUST00000173722 Baz1bQ9Z277 1479 aa11.78□□□□□ -0.52
Lig3-211ENSMUST00000173722 Urb2E9Q7L1 1524 aaKnown RBP11.77□□□□□ -0.52
Lig3-211ENSMUST00000173722 Rpap1Q80TE0 1409 aa11.77□□□□□ -0.53
Lig3-211ENSMUST00000173722 Mapk8ip2Q9ERE9 830 aa11.75□□□□□ -0.53
Lig3-211ENSMUST00000173722 Sall2Q9QX96 1004 aa11.75□□□□□ -0.53
Lig3-211ENSMUST00000173722 Chic2Q9D9G3 165 aa11.74□□□□□ -0.53
Lig3-211ENSMUST00000173722 Isy1Q69ZQ2 285 aaKnown RBP11.73□□□□□ -0.53
Lig3-211ENSMUST00000173722 Gm6268A2A3U9 297 aa11.73□□□□□ -0.53
Lig3-211ENSMUST00000173722 BccipQ9CWI3 316 aa11.73□□□□□ -0.53
Lig3-211ENSMUST00000173722 Ppm1fQ8CGA0 452 aa11.72□□□□□ -0.53
Lig3-211ENSMUST00000173722 Anapc15P60007 132 aa11.71□□□□□ -0.53
Lig3-211ENSMUST00000173722 Mak16Q8BGS0 296 aaKnown RBP11.71□□□□□ -0.53
Lig3-211ENSMUST00000173722 Arid4bA2CG63 1314 aaKnown RBP11.71□□□□□ -0.54
Lig3-211ENSMUST00000173722 Dnai2A2AC93 623 aa11.71□□□□□ -0.54
Lig3-211ENSMUST00000173722 Q8BT18 775 aa11.69□□□□□ -0.54
Lig3-211ENSMUST00000173722 Clstn2Q9ER65 966 aa11.69□□□□□ -0.54
Lig3-211ENSMUST00000173722 Eea1Q8BL66 1411 aa11.68□□□□□ -0.54
Lig3-211ENSMUST00000173722 NgefQ8CHT1 710 aa11.67□□□□□ -0.54
Lig3-211ENSMUST00000173722 Sh3bp5Q9Z131 463 aa11.67□□□□□ -0.54
Lig3-211ENSMUST00000173722 Hsp90ab1P11499 724 aaKnown RBP11.66□□□□□ -0.54
Lig3-211ENSMUST00000173722 MlecQ6ZQI3 291 aaKnown RBP11.66□□□□□ -0.54
Lig3-211ENSMUST00000173722 Kif27Q7M6Z4 1394 aa11.66□□□□□ -0.54
Lig3-211ENSMUST00000173722 IqubQ8CDK3 788 aa11.65□□□□□ -0.54
Lig3-211ENSMUST00000173722 Adam1bQ8R534 806 aa11.65□□□□□ -0.55
Lig3-211ENSMUST00000173722 Casc1Q6TDU8 730 aa11.64□□□□□ -0.55
Lig3-211ENSMUST00000173722 Soga1E1U8D0 1418 aa11.63□□□□□ -0.55
Lig3-211ENSMUST00000173722 Aebp1Q640N1 1128 aa11.62□□□□□ -0.55
Lig3-211ENSMUST00000173722 Ppp4r2Q0VGB7 417 aa11.62□□□□□ -0.55
Lig3-211ENSMUST00000173722 Znf316Q6PGE4 1016 aa11.62□□□□□ -0.55
Lig3-211ENSMUST00000173722 Plcb2A3KGF7 1181 aa11.61□□□□□ -0.55
Lig3-211ENSMUST00000173722 Trim30dE9PWL0 497 aa11.61□□□□□ -0.55
Lig3-211ENSMUST00000173722 Iqcf3Q9D498 203 aa11.61□□□□□ -0.55
Lig3-211ENSMUST00000173722 Plb1Q3TTY0 1478 aa11.61□□□□□ -0.55
Lig3-211ENSMUST00000173722 Carmil1Q6EDY6 1374 aa11.6□□□□□ -0.55
Lig3-211ENSMUST00000173722 Rad54l2Q99NG0 1466 aa11.6□□□□□ -0.55
Lig3-211ENSMUST00000173722 Cep162Q6ZQ06 1403 aa11.6□□□□□ -0.55
Lig3-211ENSMUST00000173722 Zfp777B9EKF4 885 aa11.6□□□□□ -0.55
Lig3-211ENSMUST00000173722 Duox2A2AQ99 1517 aa11.59□□□□□ -0.55
Lig3-211ENSMUST00000173722 Rrp7aQ9D1C9 280 aaKnown RBP11.59□□□□□ -0.55
Lig3-211ENSMUST00000173722 Exosc9Q9JHI7 438 aaKnown RBP11.58□□□□□ -0.56
Lig3-211ENSMUST00000173722 Efcab5A0JP43 1406 aa11.58□□□□□ -0.56
Lig3-211ENSMUST00000173722 1700123L14RikQ3V2K7 440 aa11.58□□□□□ -0.56
Lig3-211ENSMUST00000173722 Rassf8Q8CJ96 419 aa11.57□□□□□ -0.56
Lig3-211ENSMUST00000173722 PogzQ8BZH4 1409 aaKnown RBP11.56□□□□□ -0.56
Lig3-211ENSMUST00000173722 Calcoco2A2A6M5 331 aa11.56□□□□□ -0.56
Lig3-211ENSMUST00000173722 Hsp90b1P08113 802 aaKnown RBP11.56□□□□□ -0.56
Lig3-211ENSMUST00000173722 Eid3Q3V124 375 aa11.56□□□□□ -0.56
Lig3-211ENSMUST00000173722 Gm973E9Q295 1059 aa11.56□□□□□ -0.56
Lig3-211ENSMUST00000173722 Calr4Q3TQS0 420 aa11.56□□□□□ -0.56
Retrieved 100 of 22,080 RNA–protein pairs in 62.9 ms