RNA–Protein interactions for RNA: ENSMUST00000170361.8

Pdlim5-205, Transcript of PDZ and LIM domain protein 5, mousemouse

TSL 5 BASIC

Gene Pdlim5, Length 2,010 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Pdlim5-205ENSMUST00000170361 1700123L14RikQ3V2K7 440 aa11.32□□□□□ -0.6
Pdlim5-205ENSMUST00000170361 Podxl2Q8CAE9 603 aa11.31□□□□□ -0.6
Pdlim5-205ENSMUST00000170361 Rad21Q61550 635 aaKnown RBP11.31□□□□□ -0.6
Pdlim5-205ENSMUST00000170361 Brd2Q7JJ13 798 aaKnown RBP11.31□□□□□ -0.6
Pdlim5-205ENSMUST00000170361 Anks4bQ8K3X6 423 aa11.31□□□□□ -0.6
Pdlim5-205ENSMUST00000170361 Supt5hO55201 1082 aaKnown RBP11.3□□□□□ -0.6
Pdlim5-205ENSMUST00000170361 Kiaa1211Q5PR69 1207 aa11.3□□□□□ -0.6
Pdlim5-205ENSMUST00000170361 Pds5bQ4VA53 1446 aaKnown RBP11.28□□□□□ -0.6
Pdlim5-205ENSMUST00000170361 Irx3P81067 507 aa11.28□□□□□ -0.6
Pdlim5-205ENSMUST00000170361 Zfp777B9EKF4 885 aa11.27□□□□□ -0.61
Pdlim5-205ENSMUST00000170361 Znf692Q3U381 531 aa11.27□□□□□ -0.61
Pdlim5-205ENSMUST00000170361 Gtf3c6Q9D8P7 227 aa11.27□□□□□ -0.61
Pdlim5-205ENSMUST00000170361 Stag3O70576 1240 aa11.26□□□□□ -0.61
Pdlim5-205ENSMUST00000170361 MyclP10166 368 aa11.25□□□□□ -0.61
Pdlim5-205ENSMUST00000170361 DaxxO35613 739 aa11.25□□□□□ -0.61
Pdlim5-205ENSMUST00000170361 Dmrt2Q8BG36 561 aa11.25□□□□□ -0.61
Pdlim5-205ENSMUST00000170361 Npm1Q61937 292 aaKnown RBP11.23□□□□□ -0.61
Pdlim5-205ENSMUST00000170361 Wdr66E9Q743 1299 aa11.22□□□□□ -0.61
Pdlim5-205ENSMUST00000170361 Hmgb1P63158 215 aaKnown RBP11.22□□□□□ -0.61
Pdlim5-205ENSMUST00000170361 Smarca4Q3TKT4 1613 aaKnown RBP11.2□□□□□ -0.62
Pdlim5-205ENSMUST00000170361 Atad2bE9Q166 1460 aaKnown RBP11.2□□□□□ -0.62
Pdlim5-205ENSMUST00000170361 Hdac5Q9Z2V6 1113 aa11.19□□□□□ -0.62
Pdlim5-205ENSMUST00000170361 Styxl1Q9DAR2 321 aa11.18□□□□□ -0.62
Pdlim5-205ENSMUST00000170361 Nlrp6Q91WS2 869 aa11.17□□□□□ -0.62
Pdlim5-205ENSMUST00000170361 Hs1bp3Q3TC93 395 aa11.15□□□□□ -0.62
Pdlim5-205ENSMUST00000170361 Rbm10Q99KG3 930 aaKnown RBP11.14□□□□□ -0.63
Pdlim5-205ENSMUST00000170361 Brd4Q9ESU6 1400 aaKnown RBP11.11□□□□□ -0.63
Pdlim5-205ENSMUST00000170361 ErmnQ5EBJ4 281 aa11.1□□□□□ -0.63
Pdlim5-205ENSMUST00000170361 Ifnlr1Q8CGK5 535 aa11.1□□□□□ -0.63
Pdlim5-205ENSMUST00000170361 Stard8Q8K031 1019 aa11.1□□□□□ -0.63
Pdlim5-205ENSMUST00000170361 PtmaP26350 111 aa11.09□□□□□ -0.63
Pdlim5-205ENSMUST00000170361 Trim41Q5NCC3 630 aa11.09□□□□□ -0.63
Pdlim5-205ENSMUST00000170361 Baz1bQ9Z277 1479 aa11.08□□□□□ -0.64
Pdlim5-205ENSMUST00000170361 Iqgap2Q3UQ44 1575 aa11.07□□□□□ -0.64
Pdlim5-205ENSMUST00000170361 Cttnbp2B9EJA2 1648 aa11.07□□□□□ -0.64
Pdlim5-205ENSMUST00000170361 Thoc2B1AZI6 1594 aaKnown RBP11.07□□□□□ -0.64
Pdlim5-205ENSMUST00000170361 Tmed8Q3UHI4 326 aa11.06□□□□□ -0.64
Pdlim5-205ENSMUST00000170361 Zfp91Q62511 572 aa11.06□□□□□ -0.64
Pdlim5-205ENSMUST00000170361 1700019A02RikA0A087WPV9 146 aa11.05□□□□□ -0.64
Pdlim5-205ENSMUST00000170361 Plcd3Q8K2J0 785 aa11.05□□□□□ -0.64
Pdlim5-205ENSMUST00000170361 BbxQ8VBW5 907 aa11.04□□□□□ -0.64
Pdlim5-205ENSMUST00000170361 Cecr2E9Q2Z1 1453 aa11.04□□□□□ -0.64
Pdlim5-205ENSMUST00000170361 Ercc6F8VPZ5 1481 aa11.04□□□□□ -0.64
Pdlim5-205ENSMUST00000170361 Fam50aQ9WV03 339 aaKnown RBP11.04□□□□□ -0.64
Pdlim5-205ENSMUST00000170361 Psmd1Q3TXS7 953 aa11.01□□□□□ -0.65
Pdlim5-205ENSMUST00000170361 Noc3lQ8VI84 807 aaKnown RBP11.01□□□□□ -0.65
Pdlim5-205ENSMUST00000170361 Tmem132aQ922P8 1018 aa10.99□□□□□ -0.65
Pdlim5-205ENSMUST00000170361 CftrP26361 1476 aa10.98□□□□□ -0.65
Pdlim5-205ENSMUST00000170361 Ubap1lG3UW59 384 aa10.98□□□□□ -0.65
Pdlim5-205ENSMUST00000170361 Ppp6r1Q7TSI3 856 aa10.98□□□□□ -0.65
Pdlim5-205ENSMUST00000170361 Vgll3P85442 326 aa10.97□□□□□ -0.65
Pdlim5-205ENSMUST00000170361 Sh3bp1P55194 680 aa10.97□□□□□ -0.65
Pdlim5-205ENSMUST00000170361 Prm3Q62100 101 aa10.96□□□□□ -0.65
Pdlim5-205ENSMUST00000170361 Wdr62Q3U3T8 1523 aa10.96□□□□□ -0.65
Pdlim5-205ENSMUST00000170361 Neurod1Q60867 357 aa10.96□□□□□ -0.66
Pdlim5-205ENSMUST00000170361 Zbtb38Q3LR78 1197 aa10.95□□□□□ -0.66
Pdlim5-205ENSMUST00000170361 Rtl5Q5DTT4 599 aa10.95□□□□□ -0.66
Pdlim5-205ENSMUST00000170361 B4galnt3Q6L8S8 986 aa10.95□□□□□ -0.66
Pdlim5-205ENSMUST00000170361 Fam163aQ8CAA5 168 aa10.94□□□□□ -0.66
Pdlim5-205ENSMUST00000170361 Zcwpw1Q6IR42 630 aa10.94□□□□□ -0.66
Pdlim5-205ENSMUST00000170361 Hs6st3Q9QYK4 470 aa10.94□□□□□ -0.66
Pdlim5-205ENSMUST00000170361 Synj1Q8CHC4 1574 aa10.93□□□□□ -0.66
Pdlim5-205ENSMUST00000170361 WdpcpQ8C456 722 aa10.92□□□□□ -0.66
Pdlim5-205ENSMUST00000170361 DekQ7TNV0 380 aaKnown RBP10.92□□□□□ -0.66
Pdlim5-205ENSMUST00000170361 Ppp1r18Q8BQ30 594 aa10.92□□□□□ -0.66
Pdlim5-205ENSMUST00000170361 Fam135aQ6NS59 1506 aa10.9□□□□□ -0.66
Pdlim5-205ENSMUST00000170361 Trim26Q99PN3 545 aa10.9□□□□□ -0.66
Pdlim5-205ENSMUST00000170361 Cngb1E1AZ71 1325 aa10.88□□□□□ -0.67
Pdlim5-205ENSMUST00000170361 Ccdc9Q8VC31 543 aaKnown RBP10.88□□□□□ -0.67
Pdlim5-205ENSMUST00000170361 Mak16Q8BGS0 296 aaKnown RBP10.87□□□□□ -0.67
Pdlim5-205ENSMUST00000170361 Frmpd1A2AKB4 1549 aa10.87□□□□□ -0.67
Pdlim5-205ENSMUST00000170361 Riok3Q9DBU3 519 aaKnown RBP10.87□□□□□ -0.67
Pdlim5-205ENSMUST00000170361 Rbm25B2RY56 838 aaKnown RBP10.86□□□□□ -0.67
Pdlim5-205ENSMUST00000170361 AampJ3QN89 436 aa10.85□□□□□ -0.67
Pdlim5-205ENSMUST00000170361 Gm13695A2AK44 830 aa10.84□□□□□ -0.67
Pdlim5-205ENSMUST00000170361 Arid4aF8VPQ2 1261 aaKnown RBP10.82□□□□□ -0.68
Pdlim5-205ENSMUST00000170361 Sparcl1P70663 650 aa10.82□□□□□ -0.68
Pdlim5-205ENSMUST00000170361 Phldb1Q6PDH0 1371 aaKnown RBP10.82□□□□□ -0.68
Pdlim5-205ENSMUST00000170361 Sox12Q04890 314 aa10.82□□□□□ -0.68
Pdlim5-205ENSMUST00000170361 Chrm1P12657 460 aa10.81□□□□□ -0.68
Pdlim5-205ENSMUST00000170361 Irf5P56477 497 aa10.81□□□□□ -0.68
Pdlim5-205ENSMUST00000170361 Kdm2aP59997 1161 aa10.81□□□□□ -0.68
Pdlim5-205ENSMUST00000170361 Cc2d2aQ8CFW7 1633 aa10.81□□□□□ -0.68
Pdlim5-205ENSMUST00000170361 Aebp1Q640N1 1128 aa10.8□□□□□ -0.68
Pdlim5-205ENSMUST00000170361 Wwc1Q5SXA9 1104 aa10.79□□□□□ -0.68
Pdlim5-205ENSMUST00000170361 SetQ9EQU5 289 aaKnown RBP10.79□□□□□ -0.68
Pdlim5-205ENSMUST00000170361 Ccdc96Q9CR92 584 aa10.79□□□□□ -0.68
Pdlim5-205ENSMUST00000170361 TraipQ8VIG6 470 aa10.78□□□□□ -0.68
Pdlim5-205ENSMUST00000170361 Ipo4Q8VI75 1082 aa10.77□□□□□ -0.68
Pdlim5-205ENSMUST00000170361 4933402E13RikQ9D4D2 429 aa10.77□□□□□ -0.68
Pdlim5-205ENSMUST00000170361 Cdca7Q9D0M2 382 aa10.77□□□□□ -0.69
Pdlim5-205ENSMUST00000170361 Fam43bA2AM80 330 aa10.76□□□□□ -0.69
Pdlim5-205ENSMUST00000170361 Golga3P55937 1487 aa10.75□□□□□ -0.69
Pdlim5-205ENSMUST00000170361 Exoc8Q6PGF7 716 aa10.75□□□□□ -0.69
Pdlim5-205ENSMUST00000170361 Ncoa4Q5U4H9 625 aa10.75□□□□□ -0.69
Pdlim5-205ENSMUST00000170361 Unc13aQ4KUS2 1712 aa10.75□□□□□ -0.69
Pdlim5-205ENSMUST00000170361 Top2bQ64511 1612 aa10.74□□□□□ -0.69
Pdlim5-205ENSMUST00000170361 Brpf1B2RRD7 1212 aa10.74□□□□□ -0.69
Pdlim5-205ENSMUST00000170361 Mkrn3Q60764 544 aa10.73□□□□□ -0.69
Pdlim5-205ENSMUST00000170361 Dnajc5P60904 198 aa10.72□□□□□ -0.69
Retrieved 100 of 22,080 RNA–protein pairs in 13.3 ms