RNA–Protein interactions for RNA: ENSMUST00000160721.7

Pcdh1-203, Transcript of Protocadherin 1 (Fragment), mousemouse

TSL 5 BASIC

Gene Pcdh1, Length 5,416 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh1-203ENSMUST00000160721 Polr3glQ8R0C0 218 aa21.8■■□□□ 1.08
Pcdh1-203ENSMUST00000160721 Hdac5Q9Z2V6 1113 aa21.8■■□□□ 1.08
Pcdh1-203ENSMUST00000160721 Nlrp6Q91WS2 869 aa21.79■■□□□ 1.08
Pcdh1-203ENSMUST00000160721 P3h3Q8CG70 732 aa21.78■■□□□ 1.08
Pcdh1-203ENSMUST00000160721 Aplp2Q06335 707 aa21.73■■□□□ 1.07
Pcdh1-203ENSMUST00000160721 Ccer2J3QPU5 274 aa21.68■■□□□ 1.06
Pcdh1-203ENSMUST00000160721 Ppp4r2Q0VGB7 417 aa21.67■■□□□ 1.06
Pcdh1-203ENSMUST00000160721 Clstn2Q9ER65 966 aa21.66■■□□□ 1.06
Pcdh1-203ENSMUST00000160721 Ppp1r18Q8BQ30 594 aa21.66■■□□□ 1.06
Pcdh1-203ENSMUST00000160721 Calr4Q3TQS0 420 aa21.64■■□□□ 1.06
Pcdh1-203ENSMUST00000160721 MyclP10166 368 aa21.64■■□□□ 1.05
Pcdh1-203ENSMUST00000160721 AknaQ80VW7 1404 aa21.57■■□□□ 1.04
Pcdh1-203ENSMUST00000160721 Arid3cA6PWV5 409 aa21.57■■□□□ 1.04
Pcdh1-203ENSMUST00000160721 ScribQ80U72 1612 aa21.56■■□□□ 1.04
Pcdh1-203ENSMUST00000160721 Cux2P70298 1426 aa21.55■■□□□ 1.04
Pcdh1-203ENSMUST00000160721 Phldb1Q6PDH0 1371 aaKnown RBP21.52■■□□□ 1.04
Pcdh1-203ENSMUST00000160721 Eea1Q8BL66 1411 aa21.5■■□□□ 1.03
Pcdh1-203ENSMUST00000160721 Rrp7aQ9D1C9 280 aaKnown RBP21.5■■□□□ 1.03
Pcdh1-203ENSMUST00000160721 Cecr2E9Q2Z1 1453 aa21.48■■□□□ 1.03
Pcdh1-203ENSMUST00000160721 Rangap1P46061 589 aaKnown RBP21.48■■□□□ 1.03
Pcdh1-203ENSMUST00000160721 Atad2bE9Q166 1460 aaKnown RBP21.45■■□□□ 1.02
Pcdh1-203ENSMUST00000160721 Rgl3Q3UYI5 709 aa21.45■■□□□ 1.02
Pcdh1-203ENSMUST00000160721 Rad21Q61550 635 aaKnown RBP21.45■■□□□ 1.02
Pcdh1-203ENSMUST00000160721 Wdr43Q6ZQL4 677 aaKnown RBP21.44■■□□□ 1.02
Pcdh1-203ENSMUST00000160721 Kdm2aP59997 1161 aa21.38■■□□□ 1.01
Pcdh1-203ENSMUST00000160721 Mrs2Q5NCE8 434 aa21.37■■□□□ 1.01
Pcdh1-203ENSMUST00000160721 Ythdc1E9Q5K9 736 aaKnown RBP21.36■■□□□ 1.01
Pcdh1-203ENSMUST00000160721 CftrP26361 1476 aa21.36■■□□□ 1.01
Pcdh1-203ENSMUST00000160721 Upf2A2AT37 1269 aaKnown RBP21.35■■□□□ 1.01
Pcdh1-203ENSMUST00000160721 Ccdc88bQ4QRL3 1481 aa21.35■■□□□ 1.01
Pcdh1-203ENSMUST00000160721 Rpap1Q80TE0 1409 aa21.33■■□□□ 1.01
Pcdh1-203ENSMUST00000160721 CatipB9EKE5 520 aa21.33■■□□□ 1.01
Pcdh1-203ENSMUST00000160721 Fmn1Q05860 1466 aa21.32■■□□□ 1
Pcdh1-203ENSMUST00000160721 Hsp90aa1P07901 733 aaKnown RBP21.31■■□□□ 1
Pcdh1-203ENSMUST00000160721 Mtus2Q3UHD3 1353 aa21.31■■□□□ 1
Pcdh1-203ENSMUST00000160721 Kif27Q7M6Z4 1394 aa21.3■■□□□ 1
Pcdh1-203ENSMUST00000160721 Stk24Q99KH8 431 aa21.3■■□□□ 1
Pcdh1-203ENSMUST00000160721 Grwd1Q810D6 446 aaKnown RBP21.29■■□□□ 1
Pcdh1-203ENSMUST00000160721 Lmod3E9QA62 571 aa21.28■■□□□ 1
Pcdh1-203ENSMUST00000160721 Mroh3A0A1D5RM54 893 aa21.27■■□□□ 1
Pcdh1-203ENSMUST00000160721 1700123L14RikQ3V2K7 440 aa21.27■■□□□ 1
Pcdh1-203ENSMUST00000160721 Vsig10D3YX43 558 aa21.26■□□□□ 0.99
Pcdh1-203ENSMUST00000160721 Crybg2B7ZCC2 1516 aa21.26■□□□□ 0.99
Pcdh1-203ENSMUST00000160721 MlecQ6ZQI3 291 aaKnown RBP21.25■□□□□ 0.99
Pcdh1-203ENSMUST00000160721 DekQ7TNV0 380 aaKnown RBP21.25■□□□□ 0.99
Pcdh1-203ENSMUST00000160721 Baz1bQ9Z277 1479 aa21.23■□□□□ 0.99
Pcdh1-203ENSMUST00000160721 Smarca4Q3TKT4 1613 aaKnown RBP21.22■□□□□ 0.99
Pcdh1-203ENSMUST00000160721 Srpk2O54781 681 aaKnown RBP21.22■□□□□ 0.99
Pcdh1-203ENSMUST00000160721 Fam71e1A1L3C1 212 aa21.22■□□□□ 0.99
Pcdh1-203ENSMUST00000160721 Aebp1Q640N1 1128 aa21.22■□□□□ 0.99
Pcdh1-203ENSMUST00000160721 IqubQ8CDK3 788 aa21.19■□□□□ 0.98
Pcdh1-203ENSMUST00000160721 NgefQ8CHT1 710 aa21.19■□□□□ 0.98
Pcdh1-203ENSMUST00000160721 Synj1Q8CHC4 1574 aa21.17■□□□□ 0.98
Pcdh1-203ENSMUST00000160721 Gm20521D3Z5F7 333 aa21.16■□□□□ 0.98
Pcdh1-203ENSMUST00000160721 Pabpn1Q8CCS6 302 aaKnown RBP21.14■□□□□ 0.97
Pcdh1-203ENSMUST00000160721 CanxP35564 591 aaKnown RBP21.14■□□□□ 0.97
Pcdh1-203ENSMUST00000160721 Aebp2Q9Z248 504 aaKnown RBP21.14■□□□□ 0.97
Pcdh1-203ENSMUST00000160721 Lemd3Q9WU40 921 aa21.12■□□□□ 0.97
Pcdh1-203ENSMUST00000160721 Ccdc9Q8VC31 543 aaKnown RBP21.11■□□□□ 0.97
Pcdh1-203ENSMUST00000160721 Cep162Q6ZQ06 1403 aa21.11■□□□□ 0.97
Pcdh1-203ENSMUST00000160721 LrpprcQ6PB66 1392 aaKnown RBP21.1■□□□□ 0.97
Pcdh1-203ENSMUST00000160721 Dhx29Q6PGC1 1365 aaKnown RBP21.09■□□□□ 0.97
Pcdh1-203ENSMUST00000160721 Smarca2Q6DIC0 1577 aa21.09■□□□□ 0.97
Pcdh1-203ENSMUST00000160721 Trim26Q99PN3 545 aa21.08■□□□□ 0.97
Pcdh1-203ENSMUST00000160721 Exosc9Q9JHI7 438 aaKnown RBP21.08■□□□□ 0.97
Pcdh1-203ENSMUST00000160721 Trim44Q9QXA7 346 aa21.06■□□□□ 0.96
Pcdh1-203ENSMUST00000160721 Hsp90ab1P11499 724 aaKnown RBP21.06■□□□□ 0.96
Pcdh1-203ENSMUST00000160721 Irx6Q9ER75 438 aa21.05■□□□□ 0.96
Pcdh1-203ENSMUST00000160721 Trim30dE9PWL0 497 aa21.05■□□□□ 0.96
Pcdh1-203ENSMUST00000160721 Iqgap2Q3UQ44 1575 aa21.04■□□□□ 0.96
Pcdh1-203ENSMUST00000160721 Stag3O70576 1240 aa21.02■□□□□ 0.95
Pcdh1-203ENSMUST00000160721 Map4P27546 1125 aaKnown RBP21.01■□□□□ 0.95
Pcdh1-203ENSMUST00000160721 Arid4bA2CG63 1314 aaKnown RBP21.01■□□□□ 0.95
Pcdh1-203ENSMUST00000160721 Card11Q8CIS0 1159 aa20.99■□□□□ 0.95
Pcdh1-203ENSMUST00000160721 Fgd1P52734 960 aa20.98■□□□□ 0.95
Pcdh1-203ENSMUST00000160721 Ofd1Q80Z25 1017 aa20.96■□□□□ 0.95
Pcdh1-203ENSMUST00000160721 Cabp1Q9JLK7 227 aa20.94■□□□□ 0.94
Pcdh1-203ENSMUST00000160721 Cnga1P29974 684 aa20.91■□□□□ 0.94
Pcdh1-203ENSMUST00000160721 Carmil1Q6EDY6 1374 aa20.9■□□□□ 0.94
Pcdh1-203ENSMUST00000160721 Kif3bQ61771 747 aa20.9■□□□□ 0.94
Pcdh1-203ENSMUST00000160721 Cttnbp2B9EJA2 1648 aa20.9■□□□□ 0.94
Pcdh1-203ENSMUST00000160721 Stk26Q99JT2 416 aa20.88■□□□□ 0.93
Pcdh1-203ENSMUST00000160721 Mia2Q91ZV0 1396 aa20.88■□□□□ 0.93
Pcdh1-203ENSMUST00000160721 Ccdc27Q3V036 639 aa20.87■□□□□ 0.93
Pcdh1-203ENSMUST00000160721 Apbb1Q9QXJ1 710 aa20.87■□□□□ 0.93
Pcdh1-203ENSMUST00000160721 PtmaP26350 111 aa20.87■□□□□ 0.93
Pcdh1-203ENSMUST00000160721 Txndc2Q6P902 515 aa20.85■□□□□ 0.93
Pcdh1-203ENSMUST00000160721 Ggt6Q6PDE7 497 aa20.85■□□□□ 0.93
Pcdh1-203ENSMUST00000160721 Trak1Q6PD31 939 aa20.85■□□□□ 0.93
Pcdh1-203ENSMUST00000160721 Soga1E1U8D0 1418 aa20.84■□□□□ 0.93
Pcdh1-203ENSMUST00000160721 Plcb2A3KGF7 1181 aa20.83■□□□□ 0.93
Pcdh1-203ENSMUST00000160721 Psme1P97371 249 aa20.83■□□□□ 0.92
Pcdh1-203ENSMUST00000160721 Rapgef2Q8CHG7 1496 aa20.82■□□□□ 0.92
Pcdh1-203ENSMUST00000160721 Sart1Q9Z315 806 aaKnown RBP20.82■□□□□ 0.92
Pcdh1-203ENSMUST00000160721 Hspa5P20029 655 aaKnown RBP20.81■□□□□ 0.92
Pcdh1-203ENSMUST00000160721 SafbD3YXK2 937 aaKnown RBP20.81■□□□□ 0.92
Pcdh1-203ENSMUST00000160721 Pkd2O35245 966 aa20.81■□□□□ 0.92
Pcdh1-203ENSMUST00000160721 CntlnA2AM05 1397 aa20.8■□□□□ 0.92
Pcdh1-203ENSMUST00000160721 WrnO09053 1401 aa20.8■□□□□ 0.92
Pcdh1-203ENSMUST00000160721 Fyco1Q8VDC1 1437 aa20.79■□□□□ 0.92
Retrieved 100 of 22,080 RNA–protein pairs in 8.8 ms