RNA–Protein interactions for RNA: ENSMUST00000119954.8

Pcf11-201, Transcript of Cleavage and polyadenylation factor subunit homolog (S. cerevisiae), mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Pcf11, Length 5,995 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Pcf11-201ENSMUST00000119954 P3h3Q8CG70 732 aa23.26■■□□□ 1.31
Pcf11-201ENSMUST00000119954 Irx6Q9ER75 438 aa23.23■■□□□ 1.31
Pcf11-201ENSMUST00000119954 Hsp90ab1P11499 724 aaKnown RBP23.22■■□□□ 1.31
Pcf11-201ENSMUST00000119954 Fam71e1A1L3C1 212 aa23.21■■□□□ 1.31
Pcf11-201ENSMUST00000119954 1700123L14RikQ3V2K7 440 aa23.19■■□□□ 1.3
Pcf11-201ENSMUST00000119954 PtmaP26350 111 aa23.17■■□□□ 1.3
Pcf11-201ENSMUST00000119954 Ccdc27Q3V036 639 aa23.17■■□□□ 1.3
Pcf11-201ENSMUST00000119954 Trim30dE9PWL0 497 aa23.14■■□□□ 1.29
Pcf11-201ENSMUST00000119954 Clip1Q922J3 1391 aa23.12■■□□□ 1.29
Pcf11-201ENSMUST00000119954 Fgd1P52734 960 aa23.1■■□□□ 1.29
Pcf11-201ENSMUST00000119954 Htatsf1Q8BGC0 757 aa23.1■■□□□ 1.29
Pcf11-201ENSMUST00000119954 Dcaf1Q80TR8 1506 aa23.08■■□□□ 1.29
Pcf11-201ENSMUST00000119954 Znf326O88291 580 aa23.07■■□□□ 1.28
Pcf11-201ENSMUST00000119954 Trim26Q99PN3 545 aa23.05■■□□□ 1.28
Pcf11-201ENSMUST00000119954 Bcl11aQ9QYE3 773 aa23.02■■□□□ 1.28
Pcf11-201ENSMUST00000119954 Plcb2A3KGF7 1181 aa23.02■■□□□ 1.28
Pcf11-201ENSMUST00000119954 Chic2Q9D9G3 165 aa22.95■■□□□ 1.26
Pcf11-201ENSMUST00000119954 Arid4bA2CG63 1314 aaKnown RBP22.95■■□□□ 1.26
Pcf11-201ENSMUST00000119954 Irx3P81067 507 aa22.95■■□□□ 1.26
Pcf11-201ENSMUST00000119954 Rtn4Q99P72 1162 aaKnown RBP22.92■■□□□ 1.26
Pcf11-201ENSMUST00000119954 Ppm1gQ61074 542 aa22.91■■□□□ 1.26
Pcf11-201ENSMUST00000119954 Adam1bQ8R534 806 aa22.89■■□□□ 1.26
Pcf11-201ENSMUST00000119954 Clstn1Q9EPL2 979 aa22.87■■□□□ 1.25
Pcf11-201ENSMUST00000119954 Ofd1Q80Z25 1017 aa22.87■■□□□ 1.25
Pcf11-201ENSMUST00000119954 Tnnt2P50752 301 aa22.87■■□□□ 1.25
Pcf11-201ENSMUST00000119954 Ubl4bQ9CQ84 188 aa22.85■■□□□ 1.25
Pcf11-201ENSMUST00000119954 MyclP10166 368 aa22.81■■□□□ 1.24
Pcf11-201ENSMUST00000119954 Cep164Q5DU05 1446 aa22.79■■□□□ 1.24
Pcf11-201ENSMUST00000119954 AU015836B2RUM3 263 aa22.78■■□□□ 1.24
Pcf11-201ENSMUST00000119954 Casc1Q6TDU8 730 aa22.75■■□□□ 1.23
Pcf11-201ENSMUST00000119954 Clstn2Q9ER65 966 aa22.75■■□□□ 1.23
Pcf11-201ENSMUST00000119954 Znf316Q6PGE4 1016 aa22.74■■□□□ 1.23
Pcf11-201ENSMUST00000119954 NgefQ8CHT1 710 aa22.73■■□□□ 1.23
Pcf11-201ENSMUST00000119954 PnnO35691 725 aaKnown RBP22.69■■□□□ 1.22
Pcf11-201ENSMUST00000119954 Spryd3E9Q9B3 442 aa22.69■■□□□ 1.22
Pcf11-201ENSMUST00000119954 Apbb1Q9QXJ1 710 aa22.65■■□□□ 1.22
Pcf11-201ENSMUST00000119954 Aebp2Q9Z248 504 aaKnown RBP22.64■■□□□ 1.22
Pcf11-201ENSMUST00000119954 Map7O88735 730 aa22.64■■□□□ 1.21
Pcf11-201ENSMUST00000119954 Dnttip2Q8R2M2 758 aaKnown RBP22.61■■□□□ 1.21
Pcf11-201ENSMUST00000119954 BlmO88700 1416 aa22.59■■□□□ 1.21
Pcf11-201ENSMUST00000119954 Dbr1Q923B1 550 aa22.58■■□□□ 1.2
Pcf11-201ENSMUST00000119954 Erich6bQ9D4S6 220 aa22.57■■□□□ 1.2
Pcf11-201ENSMUST00000119954 Rgl3Q3UYI5 709 aa22.56■■□□□ 1.2
Pcf11-201ENSMUST00000119954 MsnP26041 577 aaKnown RBP22.56■■□□□ 1.2
Pcf11-201ENSMUST00000119954 Chmp4bQ9D8B3 224 aaKnown RBP22.56■■□□□ 1.2
Pcf11-201ENSMUST00000119954 Calcoco2A2A6M5 331 aa22.56■■□□□ 1.2
Pcf11-201ENSMUST00000119954 Kdm2aP59997 1161 aa22.56■■□□□ 1.2
Pcf11-201ENSMUST00000119954 IqubQ8CDK3 788 aa22.52■■□□□ 1.2
Pcf11-201ENSMUST00000119954 Brd4Q9ESU6 1400 aaKnown RBP22.5■■□□□ 1.19
Pcf11-201ENSMUST00000119954 Neurod2Q62414 383 aa22.49■■□□□ 1.19
Pcf11-201ENSMUST00000119954 B4galnt3Q6L8S8 986 aa22.49■■□□□ 1.19
Pcf11-201ENSMUST00000119954 Mak16Q8BGS0 296 aaKnown RBP22.49■■□□□ 1.19
Pcf11-201ENSMUST00000119954 Pes1Q9EQ61 584 aaKnown RBP22.49■■□□□ 1.19
Pcf11-201ENSMUST00000119954 Ggt6Q6PDE7 497 aa22.48■■□□□ 1.19
Pcf11-201ENSMUST00000119954 SafbD3YXK2 937 aaKnown RBP22.47■■□□□ 1.19
Pcf11-201ENSMUST00000119954 Gm973E9Q295 1059 aa22.46■■□□□ 1.19
Pcf11-201ENSMUST00000119954 Exosc9Q9JHI7 438 aaKnown RBP22.46■■□□□ 1.19
Pcf11-201ENSMUST00000119954 Mapk8ip3Q9ESN9 1337 aa22.45■■□□□ 1.18
Pcf11-201ENSMUST00000119954 Armcx1Q9CX83 456 aa22.43■■□□□ 1.18
Pcf11-201ENSMUST00000119954 Mbd3Q9Z2D8 285 aaKnown RBP22.43■■□□□ 1.18
Pcf11-201ENSMUST00000119954 KnstrnQ9D9Z1 312 aaKnown RBP22.43■■□□□ 1.18
Pcf11-201ENSMUST00000119954 Wwc2Q6NXJ0 1187 aa22.42■■□□□ 1.18
Pcf11-201ENSMUST00000119954 1700019A02RikA0A087WPV9 146 aa22.41■■□□□ 1.18
Pcf11-201ENSMUST00000119954 Tcerg1Q8CGF7 1100 aaKnown RBP22.41■■□□□ 1.18
Pcf11-201ENSMUST00000119954 Cwc22Q8C5N3 908 aaKnown RBP22.41■■□□□ 1.18
Pcf11-201ENSMUST00000119954 Hsp90b1P08113 802 aaKnown RBP22.4■■□□□ 1.18
Pcf11-201ENSMUST00000119954 Srpk2O54781 681 aaKnown RBP22.39■■□□□ 1.18
Pcf11-201ENSMUST00000119954 PtmsQ9D0J8 101 aaKnown RBP22.39■■□□□ 1.17
Pcf11-201ENSMUST00000119954 Q8BT18 775 aa22.38■■□□□ 1.17
Pcf11-201ENSMUST00000119954 MccE9PWI3 1003 aa22.38■■□□□ 1.17
Pcf11-201ENSMUST00000119954 Gm6268A2A3U9 297 aa22.37■■□□□ 1.17
Pcf11-201ENSMUST00000119954 Rrp12Q6P5B0 1295 aaKnown RBP22.37■■□□□ 1.17
Pcf11-201ENSMUST00000119954 Card11Q8CIS0 1159 aa22.37■■□□□ 1.17
Pcf11-201ENSMUST00000119954 Dnai1Q8C0M8 701 aa22.37■■□□□ 1.17
Pcf11-201ENSMUST00000119954 NudcO35685 332 aaKnown RBP22.35■■□□□ 1.17
Pcf11-201ENSMUST00000119954 Slc4a3P16283 1227 aa22.34■■□□□ 1.17
Pcf11-201ENSMUST00000119954 Grwd1Q810D6 446 aaKnown RBP22.34■■□□□ 1.17
Pcf11-201ENSMUST00000119954 Supt16hQ920B9 1047 aa22.31■■□□□ 1.16
Pcf11-201ENSMUST00000119954 Gm20521D3Z5F7 333 aa22.3■■□□□ 1.16
Pcf11-201ENSMUST00000119954 Pcmtd1P59913 357 aa22.3■■□□□ 1.16
Pcf11-201ENSMUST00000119954 Taok2Q6ZQ29 1240 aa22.3■■□□□ 1.16
Pcf11-201ENSMUST00000119954 SetQ9EQU5 289 aaKnown RBP22.3■■□□□ 1.16
Pcf11-201ENSMUST00000119954 Rwdd1Q9CQK7 243 aa22.3■■□□□ 1.16
Pcf11-201ENSMUST00000119954 Stk24Q99KH8 431 aa22.29■■□□□ 1.16
Pcf11-201ENSMUST00000119954 Setd5Q5XJV7 1441 aa22.29■■□□□ 1.16
Pcf11-201ENSMUST00000119954 Ipo9Q91YE6 1041 aa22.27■■□□□ 1.16
Pcf11-201ENSMUST00000119954 Chmp5Q9D7S9 219 aa22.26■■□□□ 1.15
Pcf11-201ENSMUST00000119954 Mroh3A0A1D5RM54 893 aa22.25■■□□□ 1.15
Pcf11-201ENSMUST00000119954 Stag3O70576 1240 aa22.24■■□□□ 1.15
Pcf11-201ENSMUST00000119954 Kiaa0754Q69ZZ9 979 aa22.24■■□□□ 1.15
Pcf11-201ENSMUST00000119954 Iqcf3Q9D498 203 aa22.24■■□□□ 1.15
Pcf11-201ENSMUST00000119954 Arhgap27A2AB59 869 aa22.24■■□□□ 1.15
Pcf11-201ENSMUST00000119954 Ecm2Q5FW85 670 aa22.24■■□□□ 1.15
Pcf11-201ENSMUST00000119954 Sh3bp5Q9Z131 463 aa22.22■■□□□ 1.15
Pcf11-201ENSMUST00000119954 RdxP26043 583 aaKnown RBP22.22■■□□□ 1.15
Pcf11-201ENSMUST00000119954 HnrnpuQ8VEK3 800 aaKnown RBP22.22■■□□□ 1.15
Pcf11-201ENSMUST00000119954 Map7d2A2AG50 781 aa22.2■■□□□ 1.14
Pcf11-201ENSMUST00000119954 Cnga1P29974 684 aa22.2■■□□□ 1.14
Pcf11-201ENSMUST00000119954 Anapc15P60007 132 aa22.2■■□□□ 1.14
Pcf11-201ENSMUST00000119954 EspnQ9ET47 871 aa22.2■■□□□ 1.14
Retrieved 100 of 22,080 RNA–protein pairs in 12.9 ms