RNA–Protein interactions for RNA: ENSMUST00000117269.7

Traf3-203, Transcript of TNF receptor-associated factor 3, mousemouse

TSL 1 (best) BASIC

Gene Traf3, Length 6,972 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Traf3-203ENSMUST00000117269 Wdr43Q6ZQL4 677 aaKnown RBP24.76■■□□□ 1.55
Traf3-203ENSMUST00000117269 Ubl4bQ9CQ84 188 aa24.76■■□□□ 1.55
Traf3-203ENSMUST00000117269 Brd4Q9ESU6 1400 aaKnown RBP24.74■■□□□ 1.55
Traf3-203ENSMUST00000117269 Irx6Q9ER75 438 aa24.72■■□□□ 1.55
Traf3-203ENSMUST00000117269 Aplp2Q06335 707 aa24.71■■□□□ 1.55
Traf3-203ENSMUST00000117269 BlmO88700 1416 aa24.65■■□□□ 1.54
Traf3-203ENSMUST00000117269 Clstn2Q9ER65 966 aa24.64■■□□□ 1.54
Traf3-203ENSMUST00000117269 Arid4bA2CG63 1314 aaKnown RBP24.59■■□□□ 1.53
Traf3-203ENSMUST00000117269 Cep164Q5DU05 1446 aa24.59■■□□□ 1.53
Traf3-203ENSMUST00000117269 Hsp90ab1P11499 724 aaKnown RBP24.59■■□□□ 1.53
Traf3-203ENSMUST00000117269 Trim44Q9QXA7 346 aa24.57■■□□□ 1.52
Traf3-203ENSMUST00000117269 Rgl3Q3UYI5 709 aa24.56■■□□□ 1.52
Traf3-203ENSMUST00000117269 Trim30dE9PWL0 497 aa24.55■■□□□ 1.52
Traf3-203ENSMUST00000117269 CanxP35564 591 aaKnown RBP24.53■■□□□ 1.52
Traf3-203ENSMUST00000117269 Znf326O88291 580 aa24.48■■□□□ 1.51
Traf3-203ENSMUST00000117269 Dcaf1Q80TR8 1506 aa24.48■■□□□ 1.51
Traf3-203ENSMUST00000117269 PtmaP26350 111 aa24.44■■□□□ 1.5
Traf3-203ENSMUST00000117269 Kdm2aP59997 1161 aa24.42■■□□□ 1.5
Traf3-203ENSMUST00000117269 Apbb1Q9QXJ1 710 aa24.42■■□□□ 1.5
Traf3-203ENSMUST00000117269 Ofd1Q80Z25 1017 aa24.38■■□□□ 1.49
Traf3-203ENSMUST00000117269 IqubQ8CDK3 788 aa24.37■■□□□ 1.49
Traf3-203ENSMUST00000117269 Grwd1Q810D6 446 aaKnown RBP24.35■■□□□ 1.49
Traf3-203ENSMUST00000117269 Rtn4Q99P72 1162 aaKnown RBP24.34■■□□□ 1.49
Traf3-203ENSMUST00000117269 Setd5Q5XJV7 1441 aa24.33■■□□□ 1.48
Traf3-203ENSMUST00000117269 Plcb2A3KGF7 1181 aa24.32■■□□□ 1.48
Traf3-203ENSMUST00000117269 Neurod2Q62414 383 aa24.31■■□□□ 1.48
Traf3-203ENSMUST00000117269 Abcc8B2RUS7 1588 aa24.29■■□□□ 1.48
Traf3-203ENSMUST00000117269 Exosc9Q9JHI7 438 aaKnown RBP24.29■■□□□ 1.48
Traf3-203ENSMUST00000117269 Srpk2O54781 681 aaKnown RBP24.28■■□□□ 1.48
Traf3-203ENSMUST00000117269 Clstn1Q9EPL2 979 aa24.26■■□□□ 1.47
Traf3-203ENSMUST00000117269 Ccdc9Q8VC31 543 aaKnown RBP24.25■■□□□ 1.47
Traf3-203ENSMUST00000117269 NgefQ8CHT1 710 aa24.25■■□□□ 1.47
Traf3-203ENSMUST00000117269 Mroh3A0A1D5RM54 893 aa24.21■■□□□ 1.47
Traf3-203ENSMUST00000117269 Gm20521D3Z5F7 333 aa24.21■■□□□ 1.47
Traf3-203ENSMUST00000117269 Mapk8ip3Q9ESN9 1337 aa24.21■■□□□ 1.47
Traf3-203ENSMUST00000117269 Card11Q8CIS0 1159 aa24.2■■□□□ 1.46
Traf3-203ENSMUST00000117269 Gm6268A2A3U9 297 aa24.19■■□□□ 1.46
Traf3-203ENSMUST00000117269 Fam71e1A1L3C1 212 aa24.19■■□□□ 1.46
Traf3-203ENSMUST00000117269 Armcx1Q9CX83 456 aa24.18■■□□□ 1.46
Traf3-203ENSMUST00000117269 Aebp2Q9Z248 504 aaKnown RBP24.17■■□□□ 1.46
Traf3-203ENSMUST00000117269 Dbr1Q923B1 550 aa24.16■■□□□ 1.46
Traf3-203ENSMUST00000117269 PnnO35691 725 aaKnown RBP24.14■■□□□ 1.46
Traf3-203ENSMUST00000117269 Rb1cc1Q9ESK9 1588 aa24.14■■□□□ 1.46
Traf3-203ENSMUST00000117269 1700019A02RikA0A087WPV9 146 aa24.13■■□□□ 1.45
Traf3-203ENSMUST00000117269 Arhgap27A2AB59 869 aa24.12■■□□□ 1.45
Traf3-203ENSMUST00000117269 Htatsf1Q8BGC0 757 aa24.11■■□□□ 1.45
Traf3-203ENSMUST00000117269 Pes1Q9EQ61 584 aaKnown RBP24.09■■□□□ 1.45
Traf3-203ENSMUST00000117269 Stk24Q99KH8 431 aa24.09■■□□□ 1.45
Traf3-203ENSMUST00000117269 Stag3O70576 1240 aa24.07■■□□□ 1.44
Traf3-203ENSMUST00000117269 MyclP10166 368 aa24.07■■□□□ 1.44
Traf3-203ENSMUST00000117269 Spryd3E9Q9B3 442 aa24.05■■□□□ 1.44
Traf3-203ENSMUST00000117269 Rrp7aQ9D1C9 280 aaKnown RBP24.05■■□□□ 1.44
Traf3-203ENSMUST00000117269 Cnga1P29974 684 aa24.01■■□□□ 1.43
Traf3-203ENSMUST00000117269 B4galnt3Q6L8S8 986 aa24.01■■□□□ 1.43
Traf3-203ENSMUST00000117269 Map7O88735 730 aa24■■□□□ 1.43
Traf3-203ENSMUST00000117269 Casc1Q6TDU8 730 aa24■■□□□ 1.43
Traf3-203ENSMUST00000117269 Hsp90b1P08113 802 aaKnown RBP23.99■■□□□ 1.43
Traf3-203ENSMUST00000117269 Ppm1gQ61074 542 aa23.98■■□□□ 1.43
Traf3-203ENSMUST00000117269 Cwc22Q8C5N3 908 aaKnown RBP23.98■■□□□ 1.43
Traf3-203ENSMUST00000117269 Iqcf3Q9D498 203 aa23.97■■□□□ 1.43
Traf3-203ENSMUST00000117269 Ccdc27Q3V036 639 aa23.96■■□□□ 1.43
Traf3-203ENSMUST00000117269 Kif15Q6P9L6 1387 aa23.96■■□□□ 1.43
Traf3-203ENSMUST00000117269 1700123L14RikQ3V2K7 440 aa23.95■■□□□ 1.43
Traf3-203ENSMUST00000117269 Chmp4bQ9D8B3 224 aaKnown RBP23.94■■□□□ 1.42
Traf3-203ENSMUST00000117269 NudcO35685 332 aaKnown RBP23.92■■□□□ 1.42
Traf3-203ENSMUST00000117269 Sh3bp5Q9Z131 463 aa23.92■■□□□ 1.42
Traf3-203ENSMUST00000117269 Mtus2Q3UHD3 1353 aa23.89■■□□□ 1.42
Traf3-203ENSMUST00000117269 Eea1Q8BL66 1411 aa23.86■■□□□ 1.41
Traf3-203ENSMUST00000117269 Rsf1E9PWW9 1441 aaKnown RBP23.84■■□□□ 1.41
Traf3-203ENSMUST00000117269 Ecm2Q5FW85 670 aa23.82■■□□□ 1.4
Traf3-203ENSMUST00000117269 Slc4a3P16283 1227 aa23.81■■□□□ 1.4
Traf3-203ENSMUST00000117269 Adam1bQ8R534 806 aa23.8■■□□□ 1.4
Traf3-203ENSMUST00000117269 MccE9PWI3 1003 aa23.79■■□□□ 1.4
Traf3-203ENSMUST00000117269 KnstrnQ9D9Z1 312 aaKnown RBP23.79■■□□□ 1.4
Traf3-203ENSMUST00000117269 Ccdc18Q640L5 1455 aa23.77■■□□□ 1.4
Traf3-203ENSMUST00000117269 Plin1Q8CGN5 517 aa23.77■■□□□ 1.4
Traf3-203ENSMUST00000117269 Rassf8Q8CJ96 419 aa23.77■■□□□ 1.4
Traf3-203ENSMUST00000117269 Anapc15P60007 132 aa23.76■■□□□ 1.39
Traf3-203ENSMUST00000117269 U2surpQ6NV83 1029 aaKnown RBP23.75■■□□□ 1.39
Traf3-203ENSMUST00000117269 Zfp777B9EKF4 885 aa23.75■■□□□ 1.39
Traf3-203ENSMUST00000117269 Znf316Q6PGE4 1016 aa23.74■■□□□ 1.39
Traf3-203ENSMUST00000117269 Rwdd1Q9CQK7 243 aa23.74■■□□□ 1.39
Traf3-203ENSMUST00000117269 Erich6bQ9D4S6 220 aa23.74■■□□□ 1.39
Traf3-203ENSMUST00000117269 Wwc2Q6NXJ0 1187 aa23.73■■□□□ 1.39
Traf3-203ENSMUST00000117269 Pcmtd1P59913 357 aa23.73■■□□□ 1.39
Traf3-203ENSMUST00000117269 SafbD3YXK2 937 aaKnown RBP23.73■■□□□ 1.39
Traf3-203ENSMUST00000117269 Rtf1A2AQ19 715 aaKnown RBP23.7■■□□□ 1.38
Traf3-203ENSMUST00000117269 Golga3P55937 1487 aa23.67■■□□□ 1.38
Traf3-203ENSMUST00000117269 HnrnpuQ8VEK3 800 aaKnown RBP23.67■■□□□ 1.38
Traf3-203ENSMUST00000117269 Hspa5P20029 655 aaKnown RBP23.65■■□□□ 1.38
Traf3-203ENSMUST00000117269 Speer4f1Q9D5Q6 258 aa23.65■■□□□ 1.38
Traf3-203ENSMUST00000117269 Ercc6F8VPZ5 1481 aa23.65■■□□□ 1.38
Traf3-203ENSMUST00000117269 Stk26Q99JT2 416 aa23.64■■□□□ 1.38
Traf3-203ENSMUST00000117269 Dnttip2Q8R2M2 758 aaKnown RBP23.64■■□□□ 1.37
Traf3-203ENSMUST00000117269 Mbd3Q9Z2D8 285 aaKnown RBP23.64■■□□□ 1.37
Traf3-203ENSMUST00000117269 Eif4g2Q62448 906 aaKnown RBP23.61■■□□□ 1.37
Traf3-203ENSMUST00000117269 Mia2Q91ZV0 1396 aa23.61■■□□□ 1.37
Traf3-203ENSMUST00000117269 Ggt6Q6PDE7 497 aa23.6■■□□□ 1.37
Traf3-203ENSMUST00000117269 Q8BT18 775 aa23.6■■□□□ 1.37
Traf3-203ENSMUST00000117269 Tnnt1O88346 262 aa23.6■■□□□ 1.37
Retrieved 100 of 22,080 RNA–protein pairs in 18.4 ms