RNA–Protein interactions for RNA: ENSMUST00000111816.2

Trim71-201, Transcript of E3 ubiquitin-protein ligase TRIM71, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Trim71, Length 9,332 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim71-201ENSMUST00000111816 MsnP26041 577 aaKnown RBP24■■□□□ 1,43
Trim71-201ENSMUST00000111816 Prdm10Q3UTQ7 1184 aa23,99■■□□□ 1,43
Trim71-201ENSMUST00000111816 Zcchc6Q5BLK4 1491 aaKnown RBP23,95■■□□□ 1,42
Trim71-201ENSMUST00000111816 Trim30dE9PWL0 497 aa23,93■■□□□ 1,42
Trim71-201ENSMUST00000111816 1700123L14RikQ3V2K7 440 aa23,87■■□□□ 1,41
Trim71-201ENSMUST00000111816 Ppm1gQ61074 542 aa23,86■■□□□ 1,41
Trim71-201ENSMUST00000111816 Ccer2J3QPU5 274 aa23,85■■□□□ 1,41
Trim71-201ENSMUST00000111816 Rangap1P46061 589 aaKnown RBP23,85■■□□□ 1,41
Trim71-201ENSMUST00000111816 Plcb2A3KGF7 1181 aa23,85■■□□□ 1,41
Trim71-201ENSMUST00000111816 Podxl2Q8CAE9 603 aa23,84■■□□□ 1,41
Trim71-201ENSMUST00000111816 Pknox2Q8BG99 474 aa23,83■■□□□ 1,4
Trim71-201ENSMUST00000111816 Casc1Q6TDU8 730 aa23,82■■□□□ 1,4
Trim71-201ENSMUST00000111816 Gm973E9Q295 1059 aa23,8■■□□□ 1,4
Trim71-201ENSMUST00000111816 Q8BT18 775 aa23,78■■□□□ 1,4
Trim71-201ENSMUST00000111816 Plekhg3Q4VAC9 1341 aa23,77■■□□□ 1,4
Trim71-201ENSMUST00000111816 Mapk8ip2Q9ERE9 830 aa23,76■■□□□ 1,39
Trim71-201ENSMUST00000111816 Lmod2Q3UHZ5 550 aa23,75■■□□□ 1,39
Trim71-201ENSMUST00000111816 Rad21Q61550 635 aaKnown RBP23,75■■□□□ 1,39
Trim71-201ENSMUST00000111816 Dcaf1Q80TR8 1506 aa23,74■■□□□ 1,39
Trim71-201ENSMUST00000111816 Rrp12Q6P5B0 1295 aaKnown RBP23,71■■□□□ 1,39
Trim71-201ENSMUST00000111816 Erich6bQ9D4S6 220 aa23,69■■□□□ 1,38
Trim71-201ENSMUST00000111816 Dnttip2Q8R2M2 758 aaKnown RBP23,67■■□□□ 1,38
Trim71-201ENSMUST00000111816 Map7O88735 730 aa23,67■■□□□ 1,38
Trim71-201ENSMUST00000111816 Sall2Q9QX96 1004 aa23,67■■□□□ 1,38
Trim71-201ENSMUST00000111816 Chmp4bQ9D8B3 224 aaKnown RBP23,65■■□□□ 1,38
Trim71-201ENSMUST00000111816 BccipQ9CWI3 316 aa23,65■■□□□ 1,38
Trim71-201ENSMUST00000111816 Taok2Q6ZQ29 1240 aa23,63■■□□□ 1,37
Trim71-201ENSMUST00000111816 4933402E13RikQ9D4D2 429 aa23,61■■□□□ 1,37
Trim71-201ENSMUST00000111816 PtmsQ9D0J8 101 aaKnown RBP23,59■■□□□ 1,37
Trim71-201ENSMUST00000111816 Wwc2Q6NXJ0 1187 aa23,59■■□□□ 1,37
Trim71-201ENSMUST00000111816 Dusp9Q7TNL7 452 aa23,58■■□□□ 1,37
Trim71-201ENSMUST00000111816 Arid4bA2CG63 1314 aaKnown RBP23,58■■□□□ 1,37
Trim71-201ENSMUST00000111816 CalrP14211 416 aaKnown RBP23,58■■□□□ 1,37
Trim71-201ENSMUST00000111816 Npm1Q61937 292 aaKnown RBP23,57■■□□□ 1,36
Trim71-201ENSMUST00000111816 Mrs2Q5NCE8 434 aa23,55■■□□□ 1,36
Trim71-201ENSMUST00000111816 RdxP26043 583 aaKnown RBP23,54■■□□□ 1,36
Trim71-201ENSMUST00000111816 Pes1Q9EQ61 584 aaKnown RBP23,54■■□□□ 1,36
Trim71-201ENSMUST00000111816 Cald1E9QA15 768 aaKnown RBP23,53■■□□□ 1,36
Trim71-201ENSMUST00000111816 Eid3Q3V124 375 aa23,5■■□□□ 1,35
Trim71-201ENSMUST00000111816 Ddrgk1Q80WW9 315 aa23,48■■□□□ 1,35
Trim71-201ENSMUST00000111816 MccE9PWI3 1003 aa23,45■■□□□ 1,35
Trim71-201ENSMUST00000111816 Gtf3c3Q3TMP1 882 aa23,45■■□□□ 1,35
Trim71-201ENSMUST00000111816 Fbxo2Q80UW2 297 aa23,45■■□□□ 1,34
Trim71-201ENSMUST00000111816 Trim26Q99PN3 545 aa23,44■■□□□ 1,34
Trim71-201ENSMUST00000111816 Ifnlr1Q8CGK5 535 aa23,42■■□□□ 1,34
Trim71-201ENSMUST00000111816 Ftsj3Q9DBE9 838 aaKnown RBP23,41■■□□□ 1,34
Trim71-201ENSMUST00000111816 Clstn2Q9ER65 966 aa23,39■■□□□ 1,34
Trim71-201ENSMUST00000111816 VgfQ0VGU4 617 aa23,38■■□□□ 1,33
Trim71-201ENSMUST00000111816 Kiaa0754Q69ZZ9 979 aa23,38■■□□□ 1,33
Trim71-201ENSMUST00000111816 Tpm3-rs7D3Z2H9 248 aa23,36■■□□□ 1,33
Trim71-201ENSMUST00000111816 KnstrnQ9D9Z1 312 aaKnown RBP23,36■■□□□ 1,33
Trim71-201ENSMUST00000111816 Becn1O88597 448 aa23,36■■□□□ 1,33
Trim71-201ENSMUST00000111816 Clip1Q922J3 1391 aa23,35■■□□□ 1,33
Trim71-201ENSMUST00000111816 Noc3lQ8VI84 807 aaKnown RBP23,34■■□□□ 1,33
Trim71-201ENSMUST00000111816 Zfp777B9EKF4 885 aa23,31■■□□□ 1,32
Trim71-201ENSMUST00000111816 Mbd3Q9Z2D8 285 aaKnown RBP23,31■■□□□ 1,32
Trim71-201ENSMUST00000111816 Ofd1Q80Z25 1017 aa23,31■■□□□ 1,32
Trim71-201ENSMUST00000111816 Trim30aP15533 496 aa23,3■■□□□ 1,32
Trim71-201ENSMUST00000111816 Clstn1Q9EPL2 979 aa23,3■■□□□ 1,32
Trim71-201ENSMUST00000111816 Ush1cQ9ES64 910 aa23,27■■□□□ 1,32
Trim71-201ENSMUST00000111816 Dnai2A2AC93 623 aa23,27■■□□□ 1,32
Trim71-201ENSMUST00000111816 Spryd3E9Q9B3 442 aa23,27■■□□□ 1,32
Trim71-201ENSMUST00000111816 Anapc15P60007 132 aa23,26■■□□□ 1,31
Trim71-201ENSMUST00000111816 Sh3bp5Q9Z131 463 aa23,25■■□□□ 1,31
Trim71-201ENSMUST00000111816 Pcmtd1P59913 357 aa23,25■■□□□ 1,31
Trim71-201ENSMUST00000111816 Gm6268A2A3U9 297 aa23,25■■□□□ 1,31
Trim71-201ENSMUST00000111816 Zrsr2Q62377 462 aaKnown RBP23,24■■□□□ 1,31
Trim71-201ENSMUST00000111816 Pde3bQ61409 1100 aa23,2■■□□□ 1,3
Trim71-201ENSMUST00000111816 Dnai1Q8C0M8 701 aa23,2■■□□□ 1,3
Trim71-201ENSMUST00000111816 Gm35339A0A140LHH9 1649 aa23,19■■□□□ 1,3
Trim71-201ENSMUST00000111816 Mapk8ip3Q9ESN9 1337 aa23,19■■□□□ 1,3
Trim71-201ENSMUST00000111816 Slc4a1apE9PX68 744 aa23,17■■□□□ 1,3
Trim71-201ENSMUST00000111816 Hsp90b1P08113 802 aaKnown RBP23,17■■□□□ 1,3
Trim71-201ENSMUST00000111816 Ipo9Q91YE6 1041 aa23,16■■□□□ 1,3
Trim71-201ENSMUST00000111816 Iqcf3Q9D498 203 aa23,16■■□□□ 1,3
Trim71-201ENSMUST00000111816 R3hcc1Q8BSI6 488 aa23,13■■□□□ 1,29
Trim71-201ENSMUST00000111816 Cwc15Q9JHS9 229 aaKnown RBP23,13■■□□□ 1,29
Trim71-201ENSMUST00000111816 Tpm3P21107 285 aaKnown RBP23,13■■□□□ 1,29
Trim71-201ENSMUST00000111816 Eif4g2Q62448 906 aaKnown RBP23,12■■□□□ 1,29
Trim71-201ENSMUST00000111816 Safb2Q80YR5 991 aaKnown RBP23,12■■□□□ 1,29
Trim71-201ENSMUST00000111816 IqubQ8CDK3 788 aa23,11■■□□□ 1,29
Trim71-201ENSMUST00000111816 Tcerg1Q8CGF7 1100 aaKnown RBP23,11■■□□□ 1,29
Trim71-201ENSMUST00000111816 NudcO35685 332 aaKnown RBP23,1■■□□□ 1,29
Trim71-201ENSMUST00000111816 Irx6Q9ER75 438 aa23,1■■□□□ 1,29
Trim71-201ENSMUST00000111816 Taf3Q5HZG4 932 aa23,1■■□□□ 1,29
Trim71-201ENSMUST00000111816 Ccdc34Q3UI66 367 aa23,1■■□□□ 1,29
Trim71-201ENSMUST00000111816 Prm3Q62100 101 aa23,09■■□□□ 1,29
Trim71-201ENSMUST00000111816 Cspp1B2RX88 1205 aa23,08■■□□□ 1,29
Trim71-201ENSMUST00000111816 P3h3Q8CG70 732 aa23,06■■□□□ 1,28
Trim71-201ENSMUST00000111816 HnrnpuQ8VEK3 800 aaKnown RBP23,06■■□□□ 1,28
Trim71-201ENSMUST00000111816 Pdcl3Q8BVF2 240 aa23,06■■□□□ 1,28
Trim71-201ENSMUST00000111816 Rassf8Q8CJ96 419 aa23,06■■□□□ 1,28
Trim71-201ENSMUST00000111816 Exosc9Q9JHI7 438 aaKnown RBP23,04■■□□□ 1,28
Trim71-201ENSMUST00000111816 Rtn4Q99P72 1162 aaKnown RBP23,03■■□□□ 1,28
Trim71-201ENSMUST00000111816 Cep164Q5DU05 1446 aa23,03■■□□□ 1,28
Trim71-201ENSMUST00000111816 Anp32eP97822 260 aaKnown RBP23,03■■□□□ 1,28
Trim71-201ENSMUST00000111816 Znf771Q8BJ90 317 aa23,03■■□□□ 1,28
Trim71-201ENSMUST00000111816 Plppr3Q7TPB0 716 aa23,01■■□□□ 1,27
Trim71-201ENSMUST00000111816 Smarce1O54941 411 aaKnown RBP23■■□□□ 1,27
Trim71-201ENSMUST00000111816 Cwc22Q8C5N3 908 aaKnown RBP22,99■■□□□ 1,27
Retrieved 100 of 22,080 RNA–protein pairs in 10,8 ms