RNA–Protein interactions for RNA: ENSMUST00000111051.9

Bdnf-210, Transcript of Brain-derived neurotrophic factor, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Bdnf, Length 4,125 nt, Biotype protein coding, Subcellular localisation Dendrite .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Bdnf-210ENSMUST00000111051 Gm13697A2AK42 830 aa11.52□□□□□ -0.57
Bdnf-210ENSMUST00000111051 Mia2Q91ZV0 1396 aa11.51□□□□□ -0.57
Bdnf-210ENSMUST00000111051 NeflP08551 543 aa11.51□□□□□ -0.57
Bdnf-210ENSMUST00000111051 Baz1bQ9Z277 1479 aa11.51□□□□□ -0.57
Bdnf-210ENSMUST00000111051 Top2bQ64511 1612 aa11.5□□□□□ -0.57
Bdnf-210ENSMUST00000111051 SafbD3YXK2 937 aaKnown RBP11.49□□□□□ -0.57
Bdnf-210ENSMUST00000111051 Cc2d2aQ8CFW7 1633 aa11.48□□□□□ -0.57
Bdnf-210ENSMUST00000111051 Pds5bQ4VA53 1446 aaKnown RBP11.47□□□□□ -0.57
Bdnf-210ENSMUST00000111051 Mrs2Q5NCE8 434 aa11.47□□□□□ -0.57
Bdnf-210ENSMUST00000111051 Wdr43Q6ZQL4 677 aaKnown RBP11.47□□□□□ -0.57
Bdnf-210ENSMUST00000111051 Chic2Q9D9G3 165 aa11.47□□□□□ -0.57
Bdnf-210ENSMUST00000111051 Ppp4r2Q0VGB7 417 aa11.47□□□□□ -0.57
Bdnf-210ENSMUST00000111051 Ubl4bQ9CQ84 188 aa11.45□□□□□ -0.58
Bdnf-210ENSMUST00000111051 Hspa5P20029 655 aaKnown RBP11.44□□□□□ -0.58
Bdnf-210ENSMUST00000111051 Ttbk1Q6PCN3 1308 aa11.44□□□□□ -0.58
Bdnf-210ENSMUST00000111051 Ncapd3Q6ZQK0 1506 aa11.43□□□□□ -0.58
Bdnf-210ENSMUST00000111051 Atad2bE9Q166 1460 aaKnown RBP11.43□□□□□ -0.58
Bdnf-210ENSMUST00000111051 Ercc6F8VPZ5 1481 aa11.41□□□□□ -0.58
Bdnf-210ENSMUST00000111051 CntlnA2AM05 1397 aa11.41□□□□□ -0.58
Bdnf-210ENSMUST00000111051 Arhgap35Q91YM2 1499 aa11.4□□□□□ -0.58
Bdnf-210ENSMUST00000111051 Hdac5Q9Z2V6 1113 aa11.4□□□□□ -0.59
Bdnf-210ENSMUST00000111051 Fyco1Q8VDC1 1437 aa11.39□□□□□ -0.59
Bdnf-210ENSMUST00000111051 Pknox2Q8BG99 474 aa11.39□□□□□ -0.59
Bdnf-210ENSMUST00000111051 Iqgap2Q3UQ44 1575 aa11.37□□□□□ -0.59
Bdnf-210ENSMUST00000111051 BicraF8VPZ9 1578 aa11.37□□□□□ -0.59
Bdnf-210ENSMUST00000111051 4933416C03RikQ3V063 378 aa11.36□□□□□ -0.59
Bdnf-210ENSMUST00000111051 Aebp1Q640N1 1128 aa11.33□□□□□ -0.6
Bdnf-210ENSMUST00000111051 Carmil1Q6EDY6 1374 aa11.32□□□□□ -0.6
Bdnf-210ENSMUST00000111051 Upf2A2AT37 1269 aaKnown RBP11.32□□□□□ -0.6
Bdnf-210ENSMUST00000111051 Arap1Q4LDD4 1452 aa11.32□□□□□ -0.6
Bdnf-210ENSMUST00000111051 Shroom4Q1W617 1475 aa11.3□□□□□ -0.6
Bdnf-210ENSMUST00000111051 Sin3aQ60520 1274 aaKnown RBP11.3□□□□□ -0.6
Bdnf-210ENSMUST00000111051 Fgd1P52734 960 aa11.29□□□□□ -0.6
Bdnf-210ENSMUST00000111051 Cwc22Q8C5N3 908 aaKnown RBP11.29□□□□□ -0.6
Bdnf-210ENSMUST00000111051 Ankrd36D3Z4K0 1415 aa11.28□□□□□ -0.6
Bdnf-210ENSMUST00000111051 Arhgef5E9Q7D5 1581 aa11.28□□□□□ -0.6
Bdnf-210ENSMUST00000111051 Znf710Q3U288 666 aa11.28□□□□□ -0.6
Bdnf-210ENSMUST00000111051 Map3k1P53349 1493 aa11.28□□□□□ -0.6
Bdnf-210ENSMUST00000111051 Naip1Q9QWK5 1403 aa11.27□□□□□ -0.6
Bdnf-210ENSMUST00000111051 Ofd1Q80Z25 1017 aa11.27□□□□□ -0.61
Bdnf-210ENSMUST00000111051 Fhad1A6PWD2 1420 aa11.27□□□□□ -0.61
Bdnf-210ENSMUST00000111051 NrkQ9R0G8 1455 aa11.26□□□□□ -0.61
Bdnf-210ENSMUST00000111051 Smg6P61406 1418 aaKnown RBP11.26□□□□□ -0.61
Bdnf-210ENSMUST00000111051 P3h3Q8CG70 732 aa11.26□□□□□ -0.61
Bdnf-210ENSMUST00000111051 Ccdc9Q8VC31 543 aaKnown RBP11.26□□□□□ -0.61
Bdnf-210ENSMUST00000111051 Supt16hQ920B9 1047 aa11.24□□□□□ -0.61
Bdnf-210ENSMUST00000111051 Rgl3Q3UYI5 709 aa11.24□□□□□ -0.61
Bdnf-210ENSMUST00000111051 Wwc2Q6NXJ0 1187 aa11.24□□□□□ -0.61
Bdnf-210ENSMUST00000111051 Os9Q8K2C7 672 aa11.24□□□□□ -0.61
Bdnf-210ENSMUST00000111051 Mphosph9A6H5Y1 991 aa11.24□□□□□ -0.61
Bdnf-210ENSMUST00000111051 Zbtb7cQ8VCZ7 619 aa11.24□□□□□ -0.61
Bdnf-210ENSMUST00000111051 PtprkP35822 1457 aa11.23□□□□□ -0.61
Bdnf-210ENSMUST00000111051 Gm13695A2AK44 830 aa11.23□□□□□ -0.61
Bdnf-210ENSMUST00000111051 UacaQ8CGB3 1411 aa11.23□□□□□ -0.61
Bdnf-210ENSMUST00000111051 Kif27Q7M6Z4 1394 aa11.22□□□□□ -0.61
Bdnf-210ENSMUST00000111051 Pkd2O35245 966 aa11.22□□□□□ -0.61
Bdnf-210ENSMUST00000111051 Gtf3c3Q3TMP1 882 aa11.22□□□□□ -0.61
Bdnf-210ENSMUST00000111051 Cux2P70298 1426 aa11.22□□□□□ -0.61
Bdnf-210ENSMUST00000111051 DaxxO35613 739 aa11.21□□□□□ -0.61
Bdnf-210ENSMUST00000111051 Tiam1Q60610 1591 aa11.21□□□□□ -0.61
Bdnf-210ENSMUST00000111051 Nolc1E9Q5C9 702 aaKnown RBP11.21□□□□□ -0.62
Bdnf-210ENSMUST00000111051 Zbtb4Q5F293 982 aa11.2□□□□□ -0.62
Bdnf-210ENSMUST00000111051 Clstn2Q9ER65 966 aa11.2□□□□□ -0.62
Bdnf-210ENSMUST00000111051 Vps8Q0P5W1 1427 aa11.2□□□□□ -0.62
Bdnf-210ENSMUST00000111051 Mtus2Q3UHD3 1353 aa11.2□□□□□ -0.62
Bdnf-210ENSMUST00000111051 Rpap1Q80TE0 1409 aa11.19□□□□□ -0.62
Bdnf-210ENSMUST00000111051 Card11Q8CIS0 1159 aa11.19□□□□□ -0.62
Bdnf-210ENSMUST00000111051 Exoc6Q8R313 802 aa11.19□□□□□ -0.62
Bdnf-210ENSMUST00000111051 Ccdc27Q3V036 639 aa11.19□□□□□ -0.62
Bdnf-210ENSMUST00000111051 Irx3P81067 507 aa11.18□□□□□ -0.62
Bdnf-210ENSMUST00000111051 LrpprcQ6PB66 1392 aaKnown RBP11.18□□□□□ -0.62
Bdnf-210ENSMUST00000111051 Ccnb3Q810T2 1396 aa11.18□□□□□ -0.62
Bdnf-210ENSMUST00000111051 Mroh2bQ7M6Y6 1581 aa11.17□□□□□ -0.62
Bdnf-210ENSMUST00000111051 Efcab5A0JP43 1406 aa11.17□□□□□ -0.62
Bdnf-210ENSMUST00000111051 Cabp1Q9JLK7 227 aa11.17□□□□□ -0.62
Bdnf-210ENSMUST00000111051 Phldb1Q6PDH0 1371 aaKnown RBP11.16□□□□□ -0.62
Bdnf-210ENSMUST00000111051 Hsp90aa1P07901 733 aaKnown RBP11.15□□□□□ -0.62
Bdnf-210ENSMUST00000111051 Rad21Q61550 635 aaKnown RBP11.15□□□□□ -0.63
Bdnf-210ENSMUST00000111051 Tcerg1Q8CGF7 1100 aaKnown RBP11.15□□□□□ -0.63
Bdnf-210ENSMUST00000111051 Cux1P53564 1515 aa11.14□□□□□ -0.63
Bdnf-210ENSMUST00000111051 Grin2bQ01097 1482 aa11.13□□□□□ -0.63
Bdnf-210ENSMUST00000111051 Grwd1Q810D6 446 aaKnown RBP11.13□□□□□ -0.63
Bdnf-210ENSMUST00000111051 Plcd4Q8K3R3 807 aa11.12□□□□□ -0.63
Bdnf-210ENSMUST00000111051 Fkbp15Q6P9Q6 1216 aaKnown RBP11.12□□□□□ -0.63
Bdnf-210ENSMUST00000111051 Nlrp6Q91WS2 869 aa11.12□□□□□ -0.63
Bdnf-210ENSMUST00000111051 Rundc1Q0VDN7 615 aa11.11□□□□□ -0.63
Bdnf-210ENSMUST00000111051 Dhx29Q6PGC1 1365 aaKnown RBP11.1□□□□□ -0.63
Bdnf-210ENSMUST00000111051 Usp47Q8BY87 1376 aa11.1□□□□□ -0.63
Bdnf-210ENSMUST00000111051 Frmpd1A2AKB4 1549 aa11.1□□□□□ -0.63
Bdnf-210ENSMUST00000111051 Arhgap27A2AB59 869 aa11.08□□□□□ -0.64
Bdnf-210ENSMUST00000111051 Slc4a3P16283 1227 aa11.08□□□□□ -0.64
Bdnf-210ENSMUST00000111051 AqrQ8CFQ3 1481 aaKnown RBP11.08□□□□□ -0.64
Bdnf-210ENSMUST00000111051 Plekhh2Q8C115 1491 aa11.07□□□□□ -0.64
Bdnf-210ENSMUST00000111051 Erich6D3Z6S9 713 aa11.07□□□□□ -0.64
Bdnf-210ENSMUST00000111051 TchhA0A0B4J1F9 1599 aa11.07□□□□□ -0.64
Bdnf-210ENSMUST00000111051 Lamc3Q9R0B6 1581 aa11.07□□□□□ -0.64
Bdnf-210ENSMUST00000111051 Camsap1A2AHC3 1581 aa11.07□□□□□ -0.64
Bdnf-210ENSMUST00000111051 Washc2Q6PGL7 1334 aa11.06□□□□□ -0.64
Bdnf-210ENSMUST00000111051 Polr1aO35134 1717 aaKnown RBP11.06□□□□□ -0.64
Bdnf-210ENSMUST00000111051 Ipo9Q91YE6 1041 aa11.06□□□□□ -0.64
Retrieved 100 of 22,080 RNA–protein pairs in 15.5 ms