RNA–Protein interactions for RNA: ENSMUST00000106550.10

Knop1-204, Transcript of Lysine-rich nucleolar protein 1, mousemouse

APPRIS P3 TSL 1 (best) BASIC

Gene Knop1, Length 5,524 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Knop1-204ENSMUST00000106550 Baz1aO88379 1555 aa18.59■□□□□ 0.57
Knop1-204ENSMUST00000106550 Golga3P55937 1487 aa18.58■□□□□ 0.56
Knop1-204ENSMUST00000106550 DiexfQ8BTT6 772 aaKnown RBP18.56■□□□□ 0.56
Knop1-204ENSMUST00000106550 Kif15Q6P9L6 1387 aa18.54■□□□□ 0.56
Knop1-204ENSMUST00000106550 Wdr43Q6ZQL4 677 aaKnown RBP18.54■□□□□ 0.56
Knop1-204ENSMUST00000106550 Rsf1E9PWW9 1441 aaKnown RBP18.52■□□□□ 0.56
Knop1-204ENSMUST00000106550 Rgl3Q3UYI5 709 aa18.52■□□□□ 0.56
Knop1-204ENSMUST00000106550 Safb2Q80YR5 991 aaKnown RBP18.45■□□□□ 0.54
Knop1-204ENSMUST00000106550 P3h3Q8CG70 732 aa18.43■□□□□ 0.54
Knop1-204ENSMUST00000106550 Aebp2Q9Z248 504 aaKnown RBP18.43■□□□□ 0.54
Knop1-204ENSMUST00000106550 Eea1Q8BL66 1411 aa18.42■□□□□ 0.54
Knop1-204ENSMUST00000106550 Ccdc18Q640L5 1455 aa18.41■□□□□ 0.54
Knop1-204ENSMUST00000106550 Ercc6F8VPZ5 1481 aa18.41■□□□□ 0.54
Knop1-204ENSMUST00000106550 Trim26Q99PN3 545 aa18.4■□□□□ 0.54
Knop1-204ENSMUST00000106550 Fgd1P52734 960 aa18.38■□□□□ 0.53
Knop1-204ENSMUST00000106550 Arhgap27A2AB59 869 aa18.36■□□□□ 0.53
Knop1-204ENSMUST00000106550 Grwd1Q810D6 446 aaKnown RBP18.34■□□□□ 0.53
Knop1-204ENSMUST00000106550 Ofd1Q80Z25 1017 aa18.32■□□□□ 0.52
Knop1-204ENSMUST00000106550 Kdm2aP59997 1161 aa18.32■□□□□ 0.52
Knop1-204ENSMUST00000106550 DekQ7TNV0 380 aaKnown RBP18.3■□□□□ 0.52
Knop1-204ENSMUST00000106550 Card11Q8CIS0 1159 aa18.29■□□□□ 0.52
Knop1-204ENSMUST00000106550 IqubQ8CDK3 788 aa18.29■□□□□ 0.52
Knop1-204ENSMUST00000106550 Srpk2O54781 681 aaKnown RBP18.26■□□□□ 0.51
Knop1-204ENSMUST00000106550 Mroh3A0A1D5RM54 893 aa18.26■□□□□ 0.51
Knop1-204ENSMUST00000106550 Hsp90aa1P07901 733 aaKnown RBP18.25■□□□□ 0.51
Knop1-204ENSMUST00000106550 Hsp90ab1P11499 724 aaKnown RBP18.25■□□□□ 0.51
Knop1-204ENSMUST00000106550 Vsig10D3YX43 558 aa18.24■□□□□ 0.51
Knop1-204ENSMUST00000106550 Trim30dE9PWL0 497 aa18.23■□□□□ 0.51
Knop1-204ENSMUST00000106550 Mtus2Q3UHD3 1353 aa18.23■□□□□ 0.51
Knop1-204ENSMUST00000106550 Kdm5dQ62240 1548 aa18.23■□□□□ 0.51
Knop1-204ENSMUST00000106550 CanxP35564 591 aaKnown RBP18.23■□□□□ 0.51
Knop1-204ENSMUST00000106550 Cwc22Q8C5N3 908 aaKnown RBP18.22■□□□□ 0.51
Knop1-204ENSMUST00000106550 Gm20521D3Z5F7 333 aa18.21■□□□□ 0.51
Knop1-204ENSMUST00000106550 Rrp7aQ9D1C9 280 aaKnown RBP18.21■□□□□ 0.51
Knop1-204ENSMUST00000106550 Irx6Q9ER75 438 aa18.19■□□□□ 0.5
Knop1-204ENSMUST00000106550 Exosc9Q9JHI7 438 aaKnown RBP18.18■□□□□ 0.5
Knop1-204ENSMUST00000106550 Apbb1Q9QXJ1 710 aa18.18■□□□□ 0.5
Knop1-204ENSMUST00000106550 Mia2Q91ZV0 1396 aa18.17■□□□□ 0.5
Knop1-204ENSMUST00000106550 Neurod2Q62414 383 aa18.15■□□□□ 0.5
Knop1-204ENSMUST00000106550 CatipB9EKE5 520 aa18.13■□□□□ 0.49
Knop1-204ENSMUST00000106550 Fam71e1A1L3C1 212 aa18.12■□□□□ 0.49
Knop1-204ENSMUST00000106550 1700123L14RikQ3V2K7 440 aa18.11■□□□□ 0.49
Knop1-204ENSMUST00000106550 Stk24Q99KH8 431 aa18.11■□□□□ 0.49
Knop1-204ENSMUST00000106550 Mapk8ip3Q9ESN9 1337 aa18.1■□□□□ 0.49
Knop1-204ENSMUST00000106550 Arid4bA2CG63 1314 aaKnown RBP18.09■□□□□ 0.49
Knop1-204ENSMUST00000106550 Ccdc9Q8VC31 543 aaKnown RBP18.09■□□□□ 0.49
Knop1-204ENSMUST00000106550 Stag3O70576 1240 aa18.08■□□□□ 0.48
Knop1-204ENSMUST00000106550 Trim44Q9QXA7 346 aa18.06■□□□□ 0.48
Knop1-204ENSMUST00000106550 Ythdc1E9Q5K9 736 aaKnown RBP18.05■□□□□ 0.48
Knop1-204ENSMUST00000106550 Hspa5P20029 655 aaKnown RBP18.05■□□□□ 0.48
Knop1-204ENSMUST00000106550 Ccdc88bQ4QRL3 1481 aa18■□□□□ 0.47
Knop1-204ENSMUST00000106550 Gm6268A2A3U9 297 aa18■□□□□ 0.47
Knop1-204ENSMUST00000106550 Lmod3E9QA62 571 aa18■□□□□ 0.47
Knop1-204ENSMUST00000106550 NgefQ8CHT1 710 aa18■□□□□ 0.47
Knop1-204ENSMUST00000106550 Kif27Q7M6Z4 1394 aa17.99■□□□□ 0.47
Knop1-204ENSMUST00000106550 Cep162Q6ZQ06 1403 aa17.99■□□□□ 0.47
Knop1-204ENSMUST00000106550 Dbr1Q923B1 550 aa17.98■□□□□ 0.47
Knop1-204ENSMUST00000106550 PtmaP26350 111 aa17.98■□□□□ 0.47
Knop1-204ENSMUST00000106550 Cnga1P29974 684 aa17.98■□□□□ 0.47
Knop1-204ENSMUST00000106550 Fmn1Q05860 1466 aa17.97■□□□□ 0.47
Knop1-204ENSMUST00000106550 Plcb2A3KGF7 1181 aa17.97■□□□□ 0.47
Knop1-204ENSMUST00000106550 Armcx1Q9CX83 456 aa17.96■□□□□ 0.47
Knop1-204ENSMUST00000106550 Htatsf1Q8BGC0 757 aa17.95■□□□□ 0.46
Knop1-204ENSMUST00000106550 Wwc2Q6NXJ0 1187 aa17.94■□□□□ 0.46
Knop1-204ENSMUST00000106550 NudcO35685 332 aaKnown RBP17.94■□□□□ 0.46
Knop1-204ENSMUST00000106550 Iqcf3Q9D498 203 aa17.94■□□□□ 0.46
Knop1-204ENSMUST00000106550 Pkd2O35245 966 aa17.93■□□□□ 0.46
Knop1-204ENSMUST00000106550 Map4P27546 1125 aaKnown RBP17.93■□□□□ 0.46
Knop1-204ENSMUST00000106550 Ppm1gQ61074 542 aa17.93■□□□□ 0.46
Knop1-204ENSMUST00000106550 Pds5bQ4VA53 1446 aaKnown RBP17.93■□□□□ 0.46
Knop1-204ENSMUST00000106550 Chmp4bQ9D8B3 224 aaKnown RBP17.93■□□□□ 0.46
Knop1-204ENSMUST00000106550 Map7O88735 730 aa17.92■□□□□ 0.46
Knop1-204ENSMUST00000106550 Rundc1Q0VDN7 615 aa17.91■□□□□ 0.46
Knop1-204ENSMUST00000106550 B4galnt3Q6L8S8 986 aa17.9■□□□□ 0.46
Knop1-204ENSMUST00000106550 Ccdc27Q3V036 639 aa17.9■□□□□ 0.46
Knop1-204ENSMUST00000106550 1700019A02RikA0A087WPV9 146 aa17.9■□□□□ 0.46
Knop1-204ENSMUST00000106550 Aebp1Q640N1 1128 aa17.9■□□□□ 0.46
Knop1-204ENSMUST00000106550 SafbD3YXK2 937 aaKnown RBP17.88■□□□□ 0.45
Knop1-204ENSMUST00000106550 MyclP10166 368 aa17.88■□□□□ 0.45
Knop1-204ENSMUST00000106550 Fhad1A6PWD2 1420 aa17.87■□□□□ 0.45
Knop1-204ENSMUST00000106550 Fyco1Q8VDC1 1437 aa17.86■□□□□ 0.45
Knop1-204ENSMUST00000106550 Rwdd1Q9CQK7 243 aa17.85■□□□□ 0.45
Knop1-204ENSMUST00000106550 Rpap1Q80TE0 1409 aa17.85■□□□□ 0.45
Knop1-204ENSMUST00000106550 Mbd3Q9Z2D8 285 aaKnown RBP17.85■□□□□ 0.45
Knop1-204ENSMUST00000106550 Zfp777B9EKF4 885 aa17.84■□□□□ 0.45
Knop1-204ENSMUST00000106550 Rtn4Q99P72 1162 aaKnown RBP17.84■□□□□ 0.45
Knop1-204ENSMUST00000106550 Znf326O88291 580 aa17.84■□□□□ 0.45
Knop1-204ENSMUST00000106550 Arhgap35Q91YM2 1499 aa17.83■□□□□ 0.44
Knop1-204ENSMUST00000106550 Ifit1bl1D3Z6F0 470 aa17.82■□□□□ 0.44
Knop1-204ENSMUST00000106550 Sin3aQ60520 1274 aaKnown RBP17.82■□□□□ 0.44
Knop1-204ENSMUST00000106550 Slc4a3P16283 1227 aa17.81■□□□□ 0.44
Knop1-204ENSMUST00000106550 Mphosph9A6H5Y1 991 aa17.8■□□□□ 0.44
Knop1-204ENSMUST00000106550 Exoc6Q8R313 802 aa17.8■□□□□ 0.44
Knop1-204ENSMUST00000106550 Trak1Q6PD31 939 aa17.79■□□□□ 0.44
Knop1-204ENSMUST00000106550 Gtf2e1Q9D0D5 440 aa17.79■□□□□ 0.44
Knop1-204ENSMUST00000106550 AknaQ80VW7 1404 aa17.79■□□□□ 0.44
Knop1-204ENSMUST00000106550 Cabp1Q9JLK7 227 aa17.79■□□□□ 0.44
Knop1-204ENSMUST00000106550 Tmf1B9EKI3 1091 aa17.78■□□□□ 0.44
Knop1-204ENSMUST00000106550 Hsp90b1P08113 802 aaKnown RBP17.78■□□□□ 0.44
Knop1-204ENSMUST00000106550 Speer4f1Q9D5Q6 258 aa17.78■□□□□ 0.44
Retrieved 100 of 22,080 RNA–protein pairs in 25.6 ms