RNA–Protein interactions for RNA: ENSMUST00000101326.9

Ebf1-202, Transcript of Transcription factor COE1, mousemouse

APPRIS ALT1 TSL 1 (best) BASIC

Gene Ebf1, Length 3,422 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ebf1-202ENSMUST00000101326 Ccdc18Q640L5 1455 aa18.41■□□□□ 0.54
Ebf1-202ENSMUST00000101326 PrkcshO08795 521 aa18.4■□□□□ 0.54
Ebf1-202ENSMUST00000101326 Arhgef5E9Q7D5 1581 aa18.4■□□□□ 0.54
Ebf1-202ENSMUST00000101326 Hspa5P20029 655 aaKnown RBP18.4■□□□□ 0.54
Ebf1-202ENSMUST00000101326 BlmO88700 1416 aa18.39■□□□□ 0.53
Ebf1-202ENSMUST00000101326 Lmod2Q3UHZ5 550 aa18.38■□□□□ 0.53
Ebf1-202ENSMUST00000101326 Supt16hQ920B9 1047 aa18.36■□□□□ 0.53
Ebf1-202ENSMUST00000101326 Eif5bQ05D44 1216 aaKnown RBP18.35■□□□□ 0.53
Ebf1-202ENSMUST00000101326 Ppp4r2Q0VGB7 417 aa18.33■□□□□ 0.53
Ebf1-202ENSMUST00000101326 Rtl5Q5DTT4 599 aa18.33■□□□□ 0.52
Ebf1-202ENSMUST00000101326 Sin3aQ60520 1274 aaKnown RBP18.32■□□□□ 0.52
Ebf1-202ENSMUST00000101326 Pelp1Q9DBD5 1123 aaKnown RBP18.31■□□□□ 0.52
Ebf1-202ENSMUST00000101326 Gm13697A2AK42 830 aa18.31■□□□□ 0.52
Ebf1-202ENSMUST00000101326 AqrQ8CFQ3 1481 aaKnown RBP18.28■□□□□ 0.52
Ebf1-202ENSMUST00000101326 Tiam1Q60610 1591 aa18.27■□□□□ 0.51
Ebf1-202ENSMUST00000101326 Naip1Q9QWK5 1403 aa18.26■□□□□ 0.51
Ebf1-202ENSMUST00000101326 Iqgap2Q3UQ44 1575 aa18.25■□□□□ 0.51
Ebf1-202ENSMUST00000101326 NrkQ9R0G8 1455 aa18.25■□□□□ 0.51
Ebf1-202ENSMUST00000101326 TchhA0A0B4J1F9 1599 aa18.24■□□□□ 0.51
Ebf1-202ENSMUST00000101326 Ube2uB1AUC4 352 aa18.23■□□□□ 0.51
Ebf1-202ENSMUST00000101326 Wdr43Q6ZQL4 677 aaKnown RBP18.23■□□□□ 0.51
Ebf1-202ENSMUST00000101326 UacaQ8CGB3 1411 aa18.21■□□□□ 0.51
Ebf1-202ENSMUST00000101326 Ttbk1Q6PCN3 1308 aa18.21■□□□□ 0.51
Ebf1-202ENSMUST00000101326 Smg6P61406 1418 aaKnown RBP18.2■□□□□ 0.5
Ebf1-202ENSMUST00000101326 P3h3Q8CG70 732 aa18.19■□□□□ 0.5
Ebf1-202ENSMUST00000101326 TnnQ80Z71 1560 aa18.14■□□□□ 0.5
Ebf1-202ENSMUST00000101326 Pak3Q61036 559 aa18.14■□□□□ 0.49
Ebf1-202ENSMUST00000101326 Washc2Q6PGL7 1334 aa18.14■□□□□ 0.49
Ebf1-202ENSMUST00000101326 Slx4Q6P1D7 1565 aa18.13■□□□□ 0.49
Ebf1-202ENSMUST00000101326 Shroom4Q1W617 1475 aa18.13■□□□□ 0.49
Ebf1-202ENSMUST00000101326 Dhx29Q6PGC1 1365 aaKnown RBP18.12■□□□□ 0.49
Ebf1-202ENSMUST00000101326 Mrs2Q5NCE8 434 aa18.11■□□□□ 0.49
Ebf1-202ENSMUST00000101326 3425401B19RikD3Z1D3 1412 aa18.11■□□□□ 0.49
Ebf1-202ENSMUST00000101326 Ccer2J3QPU5 274 aa18.1■□□□□ 0.49
Ebf1-202ENSMUST00000101326 Map3k1P53349 1493 aa18.08■□□□□ 0.48
Ebf1-202ENSMUST00000101326 Ankrd36D3Z4K0 1415 aa18.07■□□□□ 0.48
Ebf1-202ENSMUST00000101326 Pcf11G3X9Z4 1553 aa18.07■□□□□ 0.48
Ebf1-202ENSMUST00000101326 Ankrd26Q811D2 1581 aa18.06■□□□□ 0.48
Ebf1-202ENSMUST00000101326 Kif15Q6P9L6 1387 aa18.06■□□□□ 0.48
Ebf1-202ENSMUST00000101326 Fhad1A6PWD2 1420 aa18.05■□□□□ 0.48
Ebf1-202ENSMUST00000101326 Slc4a3P16283 1227 aa18.04■□□□□ 0.48
Ebf1-202ENSMUST00000101326 Chic2Q9D9G3 165 aa18.04■□□□□ 0.48
Ebf1-202ENSMUST00000101326 Mia2Q91ZV0 1396 aa18.04■□□□□ 0.48
Ebf1-202ENSMUST00000101326 Wwc2Q6NXJ0 1187 aa18.03■□□□□ 0.48
Ebf1-202ENSMUST00000101326 Liat1Q810M6 228 aa18.02■□□□□ 0.48
Ebf1-202ENSMUST00000101326 NrdcQ8BHG1 1161 aa18■□□□□ 0.47
Ebf1-202ENSMUST00000101326 Mroh2bQ7M6Y6 1581 aa17.99■□□□□ 0.47
Ebf1-202ENSMUST00000101326 Slc4a2P13808 1237 aaKnown RBP17.98■□□□□ 0.47
Ebf1-202ENSMUST00000101326 Erich3F6QRE9 1637 aa17.98■□□□□ 0.47
Ebf1-202ENSMUST00000101326 Vps8Q0P5W1 1427 aa17.97■□□□□ 0.47
Ebf1-202ENSMUST00000101326 Atad2bE9Q166 1460 aaKnown RBP17.97■□□□□ 0.47
Ebf1-202ENSMUST00000101326 CntlnA2AM05 1397 aa17.97■□□□□ 0.47
Ebf1-202ENSMUST00000101326 Ncoa2Q61026 1462 aa17.97■□□□□ 0.47
Ebf1-202ENSMUST00000101326 Fyco1Q8VDC1 1437 aa17.97■□□□□ 0.47
Ebf1-202ENSMUST00000101326 Naip5Q9R016 1403 aa17.96■□□□□ 0.47
Ebf1-202ENSMUST00000101326 Camsap1A2AHC3 1581 aa17.95■□□□□ 0.46
Ebf1-202ENSMUST00000101326 Exoc6Q8R313 802 aa17.94■□□□□ 0.46
Ebf1-202ENSMUST00000101326 Egfem1Q8C088 590 aa17.94■□□□□ 0.46
Ebf1-202ENSMUST00000101326 Hdac5Q9Z2V6 1113 aa17.93■□□□□ 0.46
Ebf1-202ENSMUST00000101326 Naip2Q9QUK4 1447 aa17.91■□□□□ 0.46
Ebf1-202ENSMUST00000101326 Efcab5A0JP43 1406 aa17.9■□□□□ 0.46
Ebf1-202ENSMUST00000101326 Lamc3Q9R0B6 1581 aa17.9■□□□□ 0.46
Ebf1-202ENSMUST00000101326 Grin2bQ01097 1482 aa17.88■□□□□ 0.45
Ebf1-202ENSMUST00000101326 Cux1P53564 1515 aa17.88■□□□□ 0.45
Ebf1-202ENSMUST00000101326 Ccdc27Q3V036 639 aa17.88■□□□□ 0.45
Ebf1-202ENSMUST00000101326 Upf2A2AT37 1269 aaKnown RBP17.88■□□□□ 0.45
Ebf1-202ENSMUST00000101326 Camsap2Q8C1B1 1461 aa17.88■□□□□ 0.45
Ebf1-202ENSMUST00000101326 Lmo7E9PYF4 1699 aaKnown RBP17.86■□□□□ 0.45
Ebf1-202ENSMUST00000101326 Kcnh8P59111 1102 aa17.86■□□□□ 0.45
Ebf1-202ENSMUST00000101326 Gm7298A0A0N4SVU1 1476 aa17.86■□□□□ 0.45
Ebf1-202ENSMUST00000101326 Frmpd1A2AKB4 1549 aa17.85■□□□□ 0.45
Ebf1-202ENSMUST00000101326 Aebp1Q640N1 1128 aa17.85■□□□□ 0.45
Ebf1-202ENSMUST00000101326 Gm13695A2AK44 830 aa17.84■□□□□ 0.45
Ebf1-202ENSMUST00000101326 A2mQ6GQT1 1474 aa17.83■□□□□ 0.44
Ebf1-202ENSMUST00000101326 Crocc2F6XLV1 1638 aa17.82■□□□□ 0.44
Ebf1-202ENSMUST00000101326 Mphosph9A6H5Y1 991 aa17.81■□□□□ 0.44
Ebf1-202ENSMUST00000101326 Carmil1Q6EDY6 1374 aa17.8■□□□□ 0.44
Ebf1-202ENSMUST00000101326 Ofd1Q80Z25 1017 aa17.79■□□□□ 0.44
Ebf1-202ENSMUST00000101326 Arhgap27A2AB59 869 aa17.79■□□□□ 0.44
Ebf1-202ENSMUST00000101326 Ipo9Q91YE6 1041 aa17.78■□□□□ 0.44
Ebf1-202ENSMUST00000101326 Dennd4bQ3U1Y4 1499 aa17.78■□□□□ 0.44
Ebf1-202ENSMUST00000101326 Gm1043A0A140LJC2 1431 aa17.76■□□□□ 0.43
Ebf1-202ENSMUST00000101326 Pds5bQ4VA53 1446 aaKnown RBP17.76■□□□□ 0.43
Ebf1-202ENSMUST00000101326 PnisrA2AJT4 805 aaKnown RBP17.75■□□□□ 0.43
Ebf1-202ENSMUST00000101326 Ccnb3Q810T2 1396 aa17.75■□□□□ 0.43
Ebf1-202ENSMUST00000101326 Ncoa1P70365 1447 aa17.75■□□□□ 0.43
Ebf1-202ENSMUST00000101326 Pprc1Q6NZN1 1644 aa17.74■□□□□ 0.43
Ebf1-202ENSMUST00000101326 Wdr62Q3U3T8 1523 aa17.73■□□□□ 0.43
Ebf1-202ENSMUST00000101326 L3mbtl2P59178 703 aa17.72■□□□□ 0.43
Ebf1-202ENSMUST00000101326 Urb2E9Q7L1 1524 aaKnown RBP17.72■□□□□ 0.43
Ebf1-202ENSMUST00000101326 Tcerg1Q8CGF7 1100 aaKnown RBP17.72■□□□□ 0.43
Ebf1-202ENSMUST00000101326 Pkd2O35245 966 aa17.71■□□□□ 0.43
Ebf1-202ENSMUST00000101326 Usp47Q8BY87 1376 aa17.71■□□□□ 0.43
Ebf1-202ENSMUST00000101326 Zfp644E9QA22 1323 aa17.7■□□□□ 0.42
Ebf1-202ENSMUST00000101326 Hsp90aa1P07901 733 aaKnown RBP17.69■□□□□ 0.42
Ebf1-202ENSMUST00000101326 Npm1Q61937 292 aaKnown RBP17.69■□□□□ 0.42
Ebf1-202ENSMUST00000101326 Cul7Q8VE73 1689 aa17.69■□□□□ 0.42
Ebf1-202ENSMUST00000101326 Amer1Q7TS75 1132 aa17.69■□□□□ 0.42
Ebf1-202ENSMUST00000101326 Thoc2B1AZI6 1594 aaKnown RBP17.68■□□□□ 0.42
Ebf1-202ENSMUST00000101326 Peg3Q3URU2 1571 aa17.68■□□□□ 0.42
Retrieved 100 of 22,080 RNA–protein pairs in 7.6 ms