RNA–Protein interactions for RNA: ENSMUST00000101164.10

Limch1-202, Transcript of LIM and calponin homology domains-containing protein 1, mousemouse

APPRIS P2 TSL 5 BASIC

Gene Limch1, Length 5,192 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Limch1-202ENSMUST00000101164 TonslQ6NZL6 1363 aa13.27□□□□□ -0.28
Limch1-202ENSMUST00000101164 Zbtb4Q5F293 982 aa13.27□□□□□ -0.29
Limch1-202ENSMUST00000101164 CatipB9EKE5 520 aa13.26□□□□□ -0.29
Limch1-202ENSMUST00000101164 Ppp1r18Q8BQ30 594 aa13.25□□□□□ -0.29
Limch1-202ENSMUST00000101164 Lmod3E9QA62 571 aa13.24□□□□□ -0.29
Limch1-202ENSMUST00000101164 Ccdc27Q3V036 639 aa13.23□□□□□ -0.29
Limch1-202ENSMUST00000101164 Phldb1Q6PDH0 1371 aaKnown RBP13.23□□□□□ -0.29
Limch1-202ENSMUST00000101164 BlmO88700 1416 aa13.22□□□□□ -0.29
Limch1-202ENSMUST00000101164 Setd5Q5XJV7 1441 aa13.22□□□□□ -0.29
Limch1-202ENSMUST00000101164 Sall2Q9QX96 1004 aa13.22□□□□□ -0.29
Limch1-202ENSMUST00000101164 Chic2Q9D9G3 165 aa13.21□□□□□ -0.29
Limch1-202ENSMUST00000101164 MyclP10166 368 aa13.2□□□□□ -0.3
Limch1-202ENSMUST00000101164 Mier1Q5UAK0 511 aa13.2□□□□□ -0.3
Limch1-202ENSMUST00000101164 Ccer2J3QPU5 274 aa13.19□□□□□ -0.3
Limch1-202ENSMUST00000101164 P3h3Q8CG70 732 aa13.16□□□□□ -0.3
Limch1-202ENSMUST00000101164 Atad2bE9Q166 1460 aaKnown RBP13.16□□□□□ -0.3
Limch1-202ENSMUST00000101164 Prdm10Q3UTQ7 1184 aa13.16□□□□□ -0.3
Limch1-202ENSMUST00000101164 Mapk8ip2Q9ERE9 830 aa13.16□□□□□ -0.3
Limch1-202ENSMUST00000101164 PrkcshO08795 521 aa13.15□□□□□ -0.3
Limch1-202ENSMUST00000101164 Calr4Q3TQS0 420 aa13.14□□□□□ -0.31
Limch1-202ENSMUST00000101164 Cux2P70298 1426 aa13.13□□□□□ -0.31
Limch1-202ENSMUST00000101164 AknaQ80VW7 1404 aa13.13□□□□□ -0.31
Limch1-202ENSMUST00000101164 Ppp4r2Q0VGB7 417 aa13.13□□□□□ -0.31
Limch1-202ENSMUST00000101164 Tnnt2P50752 301 aa13.13□□□□□ -0.31
Limch1-202ENSMUST00000101164 Arid3cA6PWV5 409 aa13.11□□□□□ -0.31
Limch1-202ENSMUST00000101164 Eid3Q3V124 375 aa13.1□□□□□ -0.31
Limch1-202ENSMUST00000101164 Wdr43Q6ZQL4 677 aaKnown RBP13.08□□□□□ -0.32
Limch1-202ENSMUST00000101164 Upf2A2AT37 1269 aaKnown RBP13.08□□□□□ -0.32
Limch1-202ENSMUST00000101164 Znf326O88291 580 aa13.07□□□□□ -0.32
Limch1-202ENSMUST00000101164 Nlrp6Q91WS2 869 aa13.07□□□□□ -0.32
Limch1-202ENSMUST00000101164 Trim44Q9QXA7 346 aa13.07□□□□□ -0.32
Limch1-202ENSMUST00000101164 Pabpn1Q8CCS6 302 aaKnown RBP13.04□□□□□ -0.32
Limch1-202ENSMUST00000101164 AU015836B2RUM3 263 aa13.02□□□□□ -0.32
Limch1-202ENSMUST00000101164 Crybg2B7ZCC2 1516 aa13.02□□□□□ -0.33
Limch1-202ENSMUST00000101164 BccipQ9CWI3 316 aa13.01□□□□□ -0.33
Limch1-202ENSMUST00000101164 Eea1Q8BL66 1411 aa13.01□□□□□ -0.33
Limch1-202ENSMUST00000101164 Rrp7aQ9D1C9 280 aaKnown RBP13.01□□□□□ -0.33
Limch1-202ENSMUST00000101164 MlecQ6ZQI3 291 aaKnown RBP13□□□□□ -0.33
Limch1-202ENSMUST00000101164 Gtf3c3Q3TMP1 882 aa13□□□□□ -0.33
Limch1-202ENSMUST00000101164 Taok2Q6ZQ29 1240 aa12.99□□□□□ -0.33
Limch1-202ENSMUST00000101164 ScribQ80U72 1612 aa12.99□□□□□ -0.33
Limch1-202ENSMUST00000101164 Znf316Q6PGE4 1016 aa12.96□□□□□ -0.34
Limch1-202ENSMUST00000101164 CftrP26361 1476 aa12.94□□□□□ -0.34
Limch1-202ENSMUST00000101164 Lemd3Q9WU40 921 aa12.94□□□□□ -0.34
Limch1-202ENSMUST00000101164 Fmn1Q05860 1466 aa12.93□□□□□ -0.34
Limch1-202ENSMUST00000101164 Kif27Q7M6Z4 1394 aa12.93□□□□□ -0.34
Limch1-202ENSMUST00000101164 Mtus2Q3UHD3 1353 aa12.92□□□□□ -0.34
Limch1-202ENSMUST00000101164 Cecr2E9Q2Z1 1453 aa12.9□□□□□ -0.34
Limch1-202ENSMUST00000101164 IqubQ8CDK3 788 aa12.9□□□□□ -0.35
Limch1-202ENSMUST00000101164 Rpap1Q80TE0 1409 aa12.89□□□□□ -0.35
Limch1-202ENSMUST00000101164 ArxO35085 564 aa12.89□□□□□ -0.35
Limch1-202ENSMUST00000101164 LrpprcQ6PB66 1392 aaKnown RBP12.89□□□□□ -0.35
Limch1-202ENSMUST00000101164 Smarca4Q3TKT4 1613 aaKnown RBP12.88□□□□□ -0.35
Limch1-202ENSMUST00000101164 Mroh3A0A1D5RM54 893 aa12.88□□□□□ -0.35
Limch1-202ENSMUST00000101164 Q8BT18 775 aa12.87□□□□□ -0.35
Limch1-202ENSMUST00000101164 Rgl3Q3UYI5 709 aa12.87□□□□□ -0.35
Limch1-202ENSMUST00000101164 Dhx29Q6PGC1 1365 aaKnown RBP12.87□□□□□ -0.35
Limch1-202ENSMUST00000101164 Srpk2O54781 681 aaKnown RBP12.86□□□□□ -0.35
Limch1-202ENSMUST00000101164 Kdm2aP59997 1161 aa12.86□□□□□ -0.35
Limch1-202ENSMUST00000101164 Baz1bQ9Z277 1479 aa12.86□□□□□ -0.35
Limch1-202ENSMUST00000101164 Podxl2Q8CAE9 603 aa12.85□□□□□ -0.35
Limch1-202ENSMUST00000101164 CanxP35564 591 aaKnown RBP12.85□□□□□ -0.35
Limch1-202ENSMUST00000101164 Stk24Q99KH8 431 aa12.83□□□□□ -0.35
Limch1-202ENSMUST00000101164 Aebp1Q640N1 1128 aa12.83□□□□□ -0.36
Limch1-202ENSMUST00000101164 Polr3glQ8R0C0 218 aa12.82□□□□□ -0.36
Limch1-202ENSMUST00000101164 4933402E13RikQ9D4D2 429 aa12.8□□□□□ -0.36
Limch1-202ENSMUST00000101164 Htatsf1Q8BGC0 757 aa12.8□□□□□ -0.36
Limch1-202ENSMUST00000101164 Gm20521D3Z5F7 333 aa12.8□□□□□ -0.36
Limch1-202ENSMUST00000101164 Arid4bA2CG63 1314 aaKnown RBP12.79□□□□□ -0.36
Limch1-202ENSMUST00000101164 Rsph4aQ8BYM7 716 aa12.78□□□□□ -0.36
Limch1-202ENSMUST00000101164 Exosc9Q9JHI7 438 aaKnown RBP12.77□□□□□ -0.37
Limch1-202ENSMUST00000101164 Ggt6Q6PDE7 497 aa12.77□□□□□ -0.37
Limch1-202ENSMUST00000101164 DekQ7TNV0 380 aaKnown RBP12.76□□□□□ -0.37
Limch1-202ENSMUST00000101164 NgefQ8CHT1 710 aa12.76□□□□□ -0.37
Limch1-202ENSMUST00000101164 Iqgap2Q3UQ44 1575 aa12.75□□□□□ -0.37
Limch1-202ENSMUST00000101164 Gtf3c5Q8R2T8 520 aa12.75□□□□□ -0.37
Limch1-202ENSMUST00000101164 Grwd1Q810D6 446 aaKnown RBP12.75□□□□□ -0.37
Limch1-202ENSMUST00000101164 Soga1E1U8D0 1418 aa12.74□□□□□ -0.37
Limch1-202ENSMUST00000101164 Dhx57Q6P5D3 1388 aaKnown RBP12.74□□□□□ -0.37
Limch1-202ENSMUST00000101164 Ccdc88bQ4QRL3 1481 aa12.74□□□□□ -0.37
Limch1-202ENSMUST00000101164 Carmil1Q6EDY6 1374 aa12.73□□□□□ -0.37
Limch1-202ENSMUST00000101164 Rtn4Q99P72 1162 aaKnown RBP12.73□□□□□ -0.37
Limch1-202ENSMUST00000101164 Dnttip2Q8R2M2 758 aaKnown RBP12.72□□□□□ -0.37
Limch1-202ENSMUST00000101164 Map4P27546 1125 aaKnown RBP12.72□□□□□ -0.37
Limch1-202ENSMUST00000101164 Smarca2Q6DIC0 1577 aa12.71□□□□□ -0.37
Limch1-202ENSMUST00000101164 Rrp12Q6P5B0 1295 aaKnown RBP12.7□□□□□ -0.38
Limch1-202ENSMUST00000101164 Cep162Q6ZQ06 1403 aa12.7□□□□□ -0.38
Limch1-202ENSMUST00000101164 Txndc2Q6P902 515 aa12.69□□□□□ -0.38
Limch1-202ENSMUST00000101164 Synj1Q8CHC4 1574 aa12.69□□□□□ -0.38
Limch1-202ENSMUST00000101164 Stag3O70576 1240 aa12.69□□□□□ -0.38
Limch1-202ENSMUST00000101164 Adam1bQ8R534 806 aa12.69□□□□□ -0.38
Limch1-202ENSMUST00000101164 Rangap1P46061 589 aaKnown RBP12.68□□□□□ -0.38
Limch1-202ENSMUST00000101164 Kif3bQ61771 747 aa12.68□□□□□ -0.38
Limch1-202ENSMUST00000101164 Map7d2A2AG50 781 aa12.68□□□□□ -0.38
Limch1-202ENSMUST00000101164 SafbD3YXK2 937 aaKnown RBP12.68□□□□□ -0.38
Limch1-202ENSMUST00000101164 Jph4Q80WT0 628 aa12.67□□□□□ -0.38
Limch1-202ENSMUST00000101164 PtmaP26350 111 aa12.67□□□□□ -0.38
Limch1-202ENSMUST00000101164 Plcd4Q8K3R3 807 aa12.66□□□□□ -0.38
Limch1-202ENSMUST00000101164 Psme1P97371 249 aa12.66□□□□□ -0.38
Limch1-202ENSMUST00000101164 Mia2Q91ZV0 1396 aa12.65□□□□□ -0.38
Retrieved 100 of 22,080 RNA–protein pairs in 88.9 ms