RNA–Protein interactions for RNA: ENSMUST00000100640.4

Sqle-202, Transcript of Squalene monooxygenase, mousemouse

TSL 1 (best) BASIC

Gene Sqle, Length 2,636 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Sqle-202ENSMUST00000100640 Rtl5Q5DTT4 599 aa17.33■□□□□ 0.36
Sqle-202ENSMUST00000100640 Phldb1Q6PDH0 1371 aaKnown RBP17.32■□□□□ 0.36
Sqle-202ENSMUST00000100640 Ccdc18Q640L5 1455 aa17.32■□□□□ 0.36
Sqle-202ENSMUST00000100640 Arhgap35Q91YM2 1499 aa17.32■□□□□ 0.36
Sqle-202ENSMUST00000100640 Baz1bQ9Z277 1479 aa17.32■□□□□ 0.36
Sqle-202ENSMUST00000100640 Calr4Q3TQS0 420 aa17.31■□□□□ 0.36
Sqle-202ENSMUST00000100640 Nolc1E9Q5C9 702 aaKnown RBP17.29■□□□□ 0.36
Sqle-202ENSMUST00000100640 Arhgef5E9Q7D5 1581 aa17.28■□□□□ 0.36
Sqle-202ENSMUST00000100640 Setd5Q5XJV7 1441 aa17.26■□□□□ 0.35
Sqle-202ENSMUST00000100640 TchhA0A0B4J1F9 1599 aa17.23■□□□□ 0.35
Sqle-202ENSMUST00000100640 Pelp1Q9DBD5 1123 aaKnown RBP17.23■□□□□ 0.35
Sqle-202ENSMUST00000100640 Ifnlr1Q8CGK5 535 aa17.23■□□□□ 0.35
Sqle-202ENSMUST00000100640 PtprkP35822 1457 aa17.18■□□□□ 0.34
Sqle-202ENSMUST00000100640 Ubl4bQ9CQ84 188 aa17.18■□□□□ 0.34
Sqle-202ENSMUST00000100640 NrkQ9R0G8 1455 aa17.18■□□□□ 0.34
Sqle-202ENSMUST00000100640 Gm13697A2AK42 830 aa17.17■□□□□ 0.34
Sqle-202ENSMUST00000100640 Fam50aQ9WV03 339 aaKnown RBP17.17■□□□□ 0.34
Sqle-202ENSMUST00000100640 UacaQ8CGB3 1411 aa17.17■□□□□ 0.34
Sqle-202ENSMUST00000100640 Supt16hQ920B9 1047 aa17.16■□□□□ 0.34
Sqle-202ENSMUST00000100640 Tiam1Q60610 1591 aa17.16■□□□□ 0.34
Sqle-202ENSMUST00000100640 BlmO88700 1416 aa17.14■□□□□ 0.34
Sqle-202ENSMUST00000100640 PrkcshO08795 521 aa17.12■□□□□ 0.33
Sqle-202ENSMUST00000100640 TnnQ80Z71 1560 aa17.11■□□□□ 0.33
Sqle-202ENSMUST00000100640 Hspa5P20029 655 aaKnown RBP17.1■□□□□ 0.33
Sqle-202ENSMUST00000100640 Slc24a1Q91WD8 1130 aa17.1■□□□□ 0.33
Sqle-202ENSMUST00000100640 Naip1Q9QWK5 1403 aa17.1■□□□□ 0.33
Sqle-202ENSMUST00000100640 Ppp4r2Q0VGB7 417 aa17.06■□□□□ 0.32
Sqle-202ENSMUST00000100640 Smg6P61406 1418 aaKnown RBP17.06■□□□□ 0.32
Sqle-202ENSMUST00000100640 Map3k1P53349 1493 aa17.05■□□□□ 0.32
Sqle-202ENSMUST00000100640 AqrQ8CFQ3 1481 aaKnown RBP17.05■□□□□ 0.32
Sqle-202ENSMUST00000100640 Washc2Q6PGL7 1334 aa17.05■□□□□ 0.32
Sqle-202ENSMUST00000100640 Ccer2J3QPU5 274 aa17.04■□□□□ 0.32
Sqle-202ENSMUST00000100640 Wdr43Q6ZQL4 677 aaKnown RBP17.04■□□□□ 0.32
Sqle-202ENSMUST00000100640 Ankrd36D3Z4K0 1415 aa17.04■□□□□ 0.32
Sqle-202ENSMUST00000100640 Il27Q8K3I6 234 aa17.03■□□□□ 0.32
Sqle-202ENSMUST00000100640 Kif15Q6P9L6 1387 aa17.02■□□□□ 0.32
Sqle-202ENSMUST00000100640 Shroom4Q1W617 1475 aa17.02■□□□□ 0.31
Sqle-202ENSMUST00000100640 Lamc3Q9R0B6 1581 aa17.01■□□□□ 0.31
Sqle-202ENSMUST00000100640 Sin3aQ60520 1274 aaKnown RBP16.99■□□□□ 0.31
Sqle-202ENSMUST00000100640 Mrc2Q64449 1479 aa16.98■□□□□ 0.31
Sqle-202ENSMUST00000100640 Eif5bQ05D44 1216 aaKnown RBP16.98■□□□□ 0.31
Sqle-202ENSMUST00000100640 Lmod2Q3UHZ5 550 aa16.98■□□□□ 0.31
Sqle-202ENSMUST00000100640 Dhx29Q6PGC1 1365 aaKnown RBP16.97■□□□□ 0.31
Sqle-202ENSMUST00000100640 Fhad1A6PWD2 1420 aa16.97■□□□□ 0.31
Sqle-202ENSMUST00000100640 Slx4Q6P1D7 1565 aa16.96■□□□□ 0.31
Sqle-202ENSMUST00000100640 Mia2Q91ZV0 1396 aa16.96■□□□□ 0.31
Sqle-202ENSMUST00000100640 Erich3F6QRE9 1637 aa16.94■□□□□ 0.3
Sqle-202ENSMUST00000100640 3425401B19RikD3Z1D3 1412 aa16.94■□□□□ 0.3
Sqle-202ENSMUST00000100640 Ankrd26Q811D2 1581 aa16.94■□□□□ 0.3
Sqle-202ENSMUST00000100640 Cux2P70298 1426 aa16.93■□□□□ 0.3
Sqle-202ENSMUST00000100640 Camsap2Q8C1B1 1461 aa16.93■□□□□ 0.3
Sqle-202ENSMUST00000100640 Pcf11G3X9Z4 1553 aa16.93■□□□□ 0.3
Sqle-202ENSMUST00000100640 Ncoa2Q61026 1462 aa16.92■□□□□ 0.3
Sqle-202ENSMUST00000100640 Vps8Q0P5W1 1427 aa16.91■□□□□ 0.3
Sqle-202ENSMUST00000100640 Mroh2bQ7M6Y6 1581 aa16.89■□□□□ 0.29
Sqle-202ENSMUST00000100640 Pak3Q61036 559 aa16.88■□□□□ 0.29
Sqle-202ENSMUST00000100640 CntlnA2AM05 1397 aa16.88■□□□□ 0.29
Sqle-202ENSMUST00000100640 Camsap1A2AHC3 1581 aa16.87■□□□□ 0.29
Sqle-202ENSMUST00000100640 Fyco1Q8VDC1 1437 aa16.86■□□□□ 0.29
Sqle-202ENSMUST00000100640 Ube2uB1AUC4 352 aa16.85■□□□□ 0.29
Sqle-202ENSMUST00000100640 Mrs2Q5NCE8 434 aa16.85■□□□□ 0.29
Sqle-202ENSMUST00000100640 Liat1Q810M6 228 aa16.84■□□□□ 0.29
Sqle-202ENSMUST00000100640 Naip5Q9R016 1403 aa16.84■□□□□ 0.29
Sqle-202ENSMUST00000100640 Efcab5A0JP43 1406 aa16.83■□□□□ 0.29
Sqle-202ENSMUST00000100640 P3h3Q8CG70 732 aa16.82■□□□□ 0.28
Sqle-202ENSMUST00000100640 Ttbk1Q6PCN3 1308 aa16.81■□□□□ 0.28
Sqle-202ENSMUST00000100640 Naip2Q9QUK4 1447 aa16.81■□□□□ 0.28
Sqle-202ENSMUST00000100640 Ccdc27Q3V036 639 aa16.8■□□□□ 0.28
Sqle-202ENSMUST00000100640 Lmo7E9PYF4 1699 aaKnown RBP16.79■□□□□ 0.28
Sqle-202ENSMUST00000100640 Crocc2F6XLV1 1638 aa16.79■□□□□ 0.28
Sqle-202ENSMUST00000100640 Grin2bQ01097 1482 aa16.78■□□□□ 0.28
Sqle-202ENSMUST00000100640 Slc4a2P13808 1237 aaKnown RBP16.78■□□□□ 0.28
Sqle-202ENSMUST00000100640 NrdcQ8BHG1 1161 aa16.78■□□□□ 0.28
Sqle-202ENSMUST00000100640 Egfem1Q8C088 590 aa16.77■□□□□ 0.28
Sqle-202ENSMUST00000100640 Upf2A2AT37 1269 aaKnown RBP16.77■□□□□ 0.27
Sqle-202ENSMUST00000100640 Hdac5Q9Z2V6 1113 aa16.77■□□□□ 0.27
Sqle-202ENSMUST00000100640 Npm1Q61937 292 aaKnown RBP16.76■□□□□ 0.27
Sqle-202ENSMUST00000100640 Kif21aQ9QXL2 1672 aa16.75■□□□□ 0.27
Sqle-202ENSMUST00000100640 Wwc2Q6NXJ0 1187 aa16.74■□□□□ 0.27
Sqle-202ENSMUST00000100640 Gm13695A2AK44 830 aa16.73■□□□□ 0.27
Sqle-202ENSMUST00000100640 Cux1P53564 1515 aa16.72■□□□□ 0.27
Sqle-202ENSMUST00000100640 Gm7298A0A0N4SVU1 1476 aa16.72■□□□□ 0.27
Sqle-202ENSMUST00000100640 Exoc6Q8R313 802 aa16.71■□□□□ 0.27
Sqle-202ENSMUST00000100640 Carmil1Q6EDY6 1374 aa16.71■□□□□ 0.26
Sqle-202ENSMUST00000100640 Peg3Q3URU2 1571 aa16.7■□□□□ 0.26
Sqle-202ENSMUST00000100640 Pprc1Q6NZN1 1644 aa16.7■□□□□ 0.26
Sqle-202ENSMUST00000100640 Slc4a3P16283 1227 aa16.7■□□□□ 0.26
Sqle-202ENSMUST00000100640 Chic2Q9D9G3 165 aa16.7■□□□□ 0.26
Sqle-202ENSMUST00000100640 A2mQ6GQT1 1474 aa16.69■□□□□ 0.26
Sqle-202ENSMUST00000100640 Ipo9Q91YE6 1041 aa16.68■□□□□ 0.26
Sqle-202ENSMUST00000100640 Cul7Q8VE73 1689 aa16.67■□□□□ 0.26
Sqle-202ENSMUST00000100640 Ncoa1P70365 1447 aa16.67■□□□□ 0.26
Sqle-202ENSMUST00000100640 Aebp1Q640N1 1128 aa16.66■□□□□ 0.26
Sqle-202ENSMUST00000100640 Dennd4bQ3U1Y4 1499 aa16.66■□□□□ 0.26
Sqle-202ENSMUST00000100640 Gm1043A0A140LJC2 1431 aa16.65■□□□□ 0.26
Sqle-202ENSMUST00000100640 PnisrA2AJT4 805 aaKnown RBP16.64■□□□□ 0.25
Sqle-202ENSMUST00000100640 Urb2E9Q7L1 1524 aaKnown RBP16.63■□□□□ 0.25
Sqle-202ENSMUST00000100640 Ccdc9Q8VC31 543 aaKnown RBP16.63■□□□□ 0.25
Sqle-202ENSMUST00000100640 Mphosph9A6H5Y1 991 aa16.63■□□□□ 0.25
Sqle-202ENSMUST00000100640 Lrriq1Q0P5X1 1673 aa16.62■□□□□ 0.25
Retrieved 100 of 22,080 RNA–protein pairs in 62.9 ms