RNA–Protein interactions for RNA: ENSMUST00000097653.10

Col6a3-202, Transcript of Collagen, type VI, alpha 3, mousemouse

APPRIS P1 TSL 5 BASIC

Gene Col6a3, Length 9,001 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a3-202ENSMUST00000097653 Adam1bQ8R534 806 aa13.98□□□□□ -0.17
Col6a3-202ENSMUST00000097653 Znf326O88291 580 aa13.95□□□□□ -0.18
Col6a3-202ENSMUST00000097653 Mrs2Q5NCE8 434 aa13.93□□□□□ -0.18
Col6a3-202ENSMUST00000097653 NacadQ5SWP3 1504 aa13.91□□□□□ -0.18
Col6a3-202ENSMUST00000097653 Safb2Q80YR5 991 aaKnown RBP13.9□□□□□ -0.18
Col6a3-202ENSMUST00000097653 Rad21Q61550 635 aaKnown RBP13.9□□□□□ -0.18
Col6a3-202ENSMUST00000097653 Rangap1P46061 589 aaKnown RBP13.89□□□□□ -0.19
Col6a3-202ENSMUST00000097653 DekQ7TNV0 380 aaKnown RBP13.88□□□□□ -0.19
Col6a3-202ENSMUST00000097653 Chic2Q9D9G3 165 aa13.87□□□□□ -0.19
Col6a3-202ENSMUST00000097653 Setd5Q5XJV7 1441 aa13.87□□□□□ -0.19
Col6a3-202ENSMUST00000097653 Clstn2Q9ER65 966 aa13.86□□□□□ -0.19
Col6a3-202ENSMUST00000097653 Fkbp15Q6P9Q6 1216 aaKnown RBP13.84□□□□□ -0.19
Col6a3-202ENSMUST00000097653 Fgd1P52734 960 aa13.82□□□□□ -0.2
Col6a3-202ENSMUST00000097653 Golga3P55937 1487 aa13.82□□□□□ -0.2
Col6a3-202ENSMUST00000097653 Eea1Q8BL66 1411 aa13.79□□□□□ -0.2
Col6a3-202ENSMUST00000097653 Tnnt2P50752 301 aa13.79□□□□□ -0.2
Col6a3-202ENSMUST00000097653 1700123L14RikQ3V2K7 440 aa13.78□□□□□ -0.2
Col6a3-202ENSMUST00000097653 Hsp90ab1P11499 724 aaKnown RBP13.78□□□□□ -0.2
Col6a3-202ENSMUST00000097653 CanxP35564 591 aaKnown RBP13.78□□□□□ -0.2
Col6a3-202ENSMUST00000097653 Fam71e1A1L3C1 212 aa13.78□□□□□ -0.2
Col6a3-202ENSMUST00000097653 Ubl4bQ9CQ84 188 aa13.77□□□□□ -0.2
Col6a3-202ENSMUST00000097653 Trim30dE9PWL0 497 aa13.77□□□□□ -0.2
Col6a3-202ENSMUST00000097653 Htatsf1Q8BGC0 757 aa13.75□□□□□ -0.21
Col6a3-202ENSMUST00000097653 Ccdc18Q640L5 1455 aa13.74□□□□□ -0.21
Col6a3-202ENSMUST00000097653 Ofd1Q80Z25 1017 aa13.73□□□□□ -0.21
Col6a3-202ENSMUST00000097653 Aebp2Q9Z248 504 aaKnown RBP13.73□□□□□ -0.21
Col6a3-202ENSMUST00000097653 PtmaP26350 111 aa13.73□□□□□ -0.21
Col6a3-202ENSMUST00000097653 P3h3Q8CG70 732 aa13.73□□□□□ -0.21
Col6a3-202ENSMUST00000097653 Calcoco2A2A6M5 331 aa13.72□□□□□ -0.21
Col6a3-202ENSMUST00000097653 Rgl3Q3UYI5 709 aa13.72□□□□□ -0.21
Col6a3-202ENSMUST00000097653 Ccdc27Q3V036 639 aa13.72□□□□□ -0.21
Col6a3-202ENSMUST00000097653 Vsig10D3YX43 558 aa13.69□□□□□ -0.22
Col6a3-202ENSMUST00000097653 Rsf1E9PWW9 1441 aaKnown RBP13.67□□□□□ -0.22
Col6a3-202ENSMUST00000097653 Cwc22Q8C5N3 908 aaKnown RBP13.67□□□□□ -0.22
Col6a3-202ENSMUST00000097653 Trim26Q99PN3 545 aa13.66□□□□□ -0.22
Col6a3-202ENSMUST00000097653 Mia2Q91ZV0 1396 aa13.66□□□□□ -0.22
Col6a3-202ENSMUST00000097653 PnnO35691 725 aaKnown RBP13.64□□□□□ -0.23
Col6a3-202ENSMUST00000097653 SetQ9EQU5 289 aaKnown RBP13.64□□□□□ -0.23
Col6a3-202ENSMUST00000097653 Mak16Q8BGS0 296 aaKnown RBP13.62□□□□□ -0.23
Col6a3-202ENSMUST00000097653 Ercc6F8VPZ5 1481 aa13.62□□□□□ -0.23
Col6a3-202ENSMUST00000097653 Ppm1gQ61074 542 aa13.62□□□□□ -0.23
Col6a3-202ENSMUST00000097653 Kif15Q6P9L6 1387 aa13.62□□□□□ -0.23
Col6a3-202ENSMUST00000097653 Kdm5dQ62240 1548 aa13.62□□□□□ -0.23
Col6a3-202ENSMUST00000097653 Card11Q8CIS0 1159 aa13.6□□□□□ -0.23
Col6a3-202ENSMUST00000097653 Irx6Q9ER75 438 aa13.58□□□□□ -0.23
Col6a3-202ENSMUST00000097653 Mtus2Q3UHD3 1353 aa13.58□□□□□ -0.24
Col6a3-202ENSMUST00000097653 IqubQ8CDK3 788 aa13.57□□□□□ -0.24
Col6a3-202ENSMUST00000097653 Map7O88735 730 aa13.57□□□□□ -0.24
Col6a3-202ENSMUST00000097653 Gm973E9Q295 1059 aa13.55□□□□□ -0.24
Col6a3-202ENSMUST00000097653 Plcb2A3KGF7 1181 aa13.55□□□□□ -0.24
Col6a3-202ENSMUST00000097653 Grwd1Q810D6 446 aaKnown RBP13.55□□□□□ -0.24
Col6a3-202ENSMUST00000097653 Znf316Q6PGE4 1016 aa13.55□□□□□ -0.24
Col6a3-202ENSMUST00000097653 Chmp4bQ9D8B3 224 aaKnown RBP13.54□□□□□ -0.24
Col6a3-202ENSMUST00000097653 Kdm2aP59997 1161 aa13.54□□□□□ -0.24
Col6a3-202ENSMUST00000097653 Arid4bA2CG63 1314 aaKnown RBP13.54□□□□□ -0.24
Col6a3-202ENSMUST00000097653 Mbd3Q9Z2D8 285 aaKnown RBP13.54□□□□□ -0.24
Col6a3-202ENSMUST00000097653 Exosc9Q9JHI7 438 aaKnown RBP13.53□□□□□ -0.24
Col6a3-202ENSMUST00000097653 Mroh3A0A1D5RM54 893 aa13.53□□□□□ -0.24
Col6a3-202ENSMUST00000097653 Clstn1Q9EPL2 979 aa13.53□□□□□ -0.24
Col6a3-202ENSMUST00000097653 Srpk2O54781 681 aaKnown RBP13.52□□□□□ -0.25
Col6a3-202ENSMUST00000097653 Apbb1Q9QXJ1 710 aa13.51□□□□□ -0.25
Col6a3-202ENSMUST00000097653 AU015836B2RUM3 263 aa13.51□□□□□ -0.25
Col6a3-202ENSMUST00000097653 Casc1Q6TDU8 730 aa13.51□□□□□ -0.25
Col6a3-202ENSMUST00000097653 Map7d2A2AG50 781 aa13.51□□□□□ -0.25
Col6a3-202ENSMUST00000097653 Mapk8ip3Q9ESN9 1337 aa13.5□□□□□ -0.25
Col6a3-202ENSMUST00000097653 Irx3P81067 507 aa13.49□□□□□ -0.25
Col6a3-202ENSMUST00000097653 MsnP26041 577 aaKnown RBP13.48□□□□□ -0.25
Col6a3-202ENSMUST00000097653 Rtn4Q99P72 1162 aaKnown RBP13.48□□□□□ -0.25
Col6a3-202ENSMUST00000097653 Pes1Q9EQ61 584 aaKnown RBP13.47□□□□□ -0.25
Col6a3-202ENSMUST00000097653 Neurod2Q62414 383 aa13.46□□□□□ -0.26
Col6a3-202ENSMUST00000097653 Fhad1A6PWD2 1420 aa13.45□□□□□ -0.26
Col6a3-202ENSMUST00000097653 PtmsQ9D0J8 101 aaKnown RBP13.45□□□□□ -0.26
Col6a3-202ENSMUST00000097653 Gm20521D3Z5F7 333 aa13.45□□□□□ -0.26
Col6a3-202ENSMUST00000097653 Fmn1Q05860 1466 aa13.44□□□□□ -0.26
Col6a3-202ENSMUST00000097653 Bcl11aQ9QYE3 773 aa13.44□□□□□ -0.26
Col6a3-202ENSMUST00000097653 Zfp777B9EKF4 885 aa13.44□□□□□ -0.26
Col6a3-202ENSMUST00000097653 Tcerg1Q8CGF7 1100 aaKnown RBP13.44□□□□□ -0.26
Col6a3-202ENSMUST00000097653 Rwdd1Q9CQK7 243 aa13.43□□□□□ -0.26
Col6a3-202ENSMUST00000097653 KnstrnQ9D9Z1 312 aaKnown RBP13.43□□□□□ -0.26
Col6a3-202ENSMUST00000097653 SafbD3YXK2 937 aaKnown RBP13.41□□□□□ -0.26
Col6a3-202ENSMUST00000097653 Iqcf3Q9D498 203 aa13.41□□□□□ -0.26
Col6a3-202ENSMUST00000097653 Gm6268A2A3U9 297 aa13.41□□□□□ -0.26
Col6a3-202ENSMUST00000097653 NudcO35685 332 aaKnown RBP13.41□□□□□ -0.26
Col6a3-202ENSMUST00000097653 4933402E13RikQ9D4D2 429 aa13.41□□□□□ -0.26
Col6a3-202ENSMUST00000097653 Eif4g2Q62448 906 aaKnown RBP13.4□□□□□ -0.26
Col6a3-202ENSMUST00000097653 B4galnt3Q6L8S8 986 aa13.4□□□□□ -0.26
Col6a3-202ENSMUST00000097653 Arhgap27A2AB59 869 aa13.4□□□□□ -0.27
Col6a3-202ENSMUST00000097653 Dbr1Q923B1 550 aa13.4□□□□□ -0.27
Col6a3-202ENSMUST00000097653 Arhgap35Q91YM2 1499 aa13.4□□□□□ -0.27
Col6a3-202ENSMUST00000097653 Fyco1Q8VDC1 1437 aa13.39□□□□□ -0.27
Col6a3-202ENSMUST00000097653 Stag3O70576 1240 aa13.38□□□□□ -0.27
Col6a3-202ENSMUST00000097653 Wwc2Q6NXJ0 1187 aa13.38□□□□□ -0.27
Col6a3-202ENSMUST00000097653 MyclP10166 368 aa13.38□□□□□ -0.27
Col6a3-202ENSMUST00000097653 Cep162Q6ZQ06 1403 aa13.38□□□□□ -0.27
Col6a3-202ENSMUST00000097653 Hspa5P20029 655 aaKnown RBP13.37□□□□□ -0.27
Col6a3-202ENSMUST00000097653 Rrp7aQ9D1C9 280 aaKnown RBP13.37□□□□□ -0.27
Col6a3-202ENSMUST00000097653 Armcx1Q9CX83 456 aa13.35□□□□□ -0.27
Col6a3-202ENSMUST00000097653 MccE9PWI3 1003 aa13.35□□□□□ -0.27
Col6a3-202ENSMUST00000097653 BccipQ9CWI3 316 aa13.35□□□□□ -0.27
Col6a3-202ENSMUST00000097653 Cttnbp2B9EJA2 1648 aa13.35□□□□□ -0.27
Retrieved 100 of 22,080 RNA–protein pairs in 7.5 ms