RNA–Protein interactions for RNA: ENSMUST00000094951.9

Scn1a-202, Transcript of Sodium channel protein type 1 subunit alpha, mousemouse

TSL 5 BASIC

Gene Scn1a, Length 5,946 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Scn1a-202ENSMUST00000094951 Mtus2Q3UHD3 1353 aa9.6□□□□□ -0.87
Scn1a-202ENSMUST00000094951 Eif4g2Q62448 906 aaKnown RBP9.6□□□□□ -0.87
Scn1a-202ENSMUST00000094951 Eea1Q8BL66 1411 aa9.59□□□□□ -0.87
Scn1a-202ENSMUST00000094951 Srpk2O54781 681 aaKnown RBP9.58□□□□□ -0.88
Scn1a-202ENSMUST00000094951 4930567H17RikQ3V0K5 233 aa9.58□□□□□ -0.88
Scn1a-202ENSMUST00000094951 Ggt6Q6PDE7 497 aa9.57□□□□□ -0.88
Scn1a-202ENSMUST00000094951 Pcgf6Q99NA9 353 aa9.56□□□□□ -0.88
Scn1a-202ENSMUST00000094951 Fmn1Q05860 1466 aa9.55□□□□□ -0.88
Scn1a-202ENSMUST00000094951 Rtl5Q5DTT4 599 aa9.54□□□□□ -0.88
Scn1a-202ENSMUST00000094951 Rrp7aQ9D1C9 280 aaKnown RBP9.53□□□□□ -0.88
Scn1a-202ENSMUST00000094951 Kif27Q7M6Z4 1394 aa9.53□□□□□ -0.88
Scn1a-202ENSMUST00000094951 Upf2A2AT37 1269 aaKnown RBP9.53□□□□□ -0.88
Scn1a-202ENSMUST00000094951 Smarca2Q6DIC0 1577 aa9.53□□□□□ -0.88
Scn1a-202ENSMUST00000094951 Iqcf3Q9D498 203 aa9.52□□□□□ -0.89
Scn1a-202ENSMUST00000094951 Mroh3A0A1D5RM54 893 aa9.51□□□□□ -0.89
Scn1a-202ENSMUST00000094951 4933416C03RikQ3V063 378 aa9.5□□□□□ -0.89
Scn1a-202ENSMUST00000094951 Chic2Q9D9G3 165 aa9.5□□□□□ -0.89
Scn1a-202ENSMUST00000094951 WrnO09053 1401 aa9.5□□□□□ -0.89
Scn1a-202ENSMUST00000094951 Arid3cA6PWV5 409 aa9.49□□□□□ -0.89
Scn1a-202ENSMUST00000094951 Exosc9Q9JHI7 438 aaKnown RBP9.49□□□□□ -0.89
Scn1a-202ENSMUST00000094951 Smarca4Q3TKT4 1613 aaKnown RBP9.48□□□□□ -0.89
Scn1a-202ENSMUST00000094951 Arid4bA2CG63 1314 aaKnown RBP9.48□□□□□ -0.89
Scn1a-202ENSMUST00000094951 Mier1Q5UAK0 511 aa9.48□□□□□ -0.89
Scn1a-202ENSMUST00000094951 Mia2Q91ZV0 1396 aa9.47□□□□□ -0.89
Scn1a-202ENSMUST00000094951 Rpap1Q80TE0 1409 aa9.47□□□□□ -0.89
Scn1a-202ENSMUST00000094951 Gm20521D3Z5F7 333 aa9.47□□□□□ -0.89
Scn1a-202ENSMUST00000094951 Zbtb4Q5F293 982 aa9.46□□□□□ -0.9
Scn1a-202ENSMUST00000094951 LrpprcQ6PB66 1392 aaKnown RBP9.45□□□□□ -0.9
Scn1a-202ENSMUST00000094951 Baz1bQ9Z277 1479 aa9.45□□□□□ -0.9
Scn1a-202ENSMUST00000094951 Hmgb2P30681 210 aaKnown RBP9.45□□□□□ -0.9
Scn1a-202ENSMUST00000094951 Prdm10Q3UTQ7 1184 aa9.43□□□□□ -0.9
Scn1a-202ENSMUST00000094951 Ccnb3Q810T2 1396 aa9.43□□□□□ -0.9
Scn1a-202ENSMUST00000094951 Soga1E1U8D0 1418 aa9.43□□□□□ -0.9
Scn1a-202ENSMUST00000094951 Psme1P97371 249 aa9.43□□□□□ -0.9
Scn1a-202ENSMUST00000094951 ClspnQ80YR7 1315 aa9.42□□□□□ -0.9
Scn1a-202ENSMUST00000094951 Carmil1Q6EDY6 1374 aa9.42□□□□□ -0.9
Scn1a-202ENSMUST00000094951 Chmp4bQ9D8B3 224 aaKnown RBP9.42□□□□□ -0.9
Scn1a-202ENSMUST00000094951 Znf326O88291 580 aa9.41□□□□□ -0.9
Scn1a-202ENSMUST00000094951 Cwc22Q8C5N3 908 aaKnown RBP9.41□□□□□ -0.9
Scn1a-202ENSMUST00000094951 Stag3O70576 1240 aa9.4□□□□□ -0.9
Scn1a-202ENSMUST00000094951 Dhx29Q6PGC1 1365 aaKnown RBP9.4□□□□□ -0.9
Scn1a-202ENSMUST00000094951 Polr3glQ8R0C0 218 aa9.4□□□□□ -0.9
Scn1a-202ENSMUST00000094951 Fgd1P52734 960 aa9.4□□□□□ -0.9
Scn1a-202ENSMUST00000094951 Ncoa2Q61026 1462 aa9.4□□□□□ -0.9
Scn1a-202ENSMUST00000094951 Grwd1Q810D6 446 aaKnown RBP9.4□□□□□ -0.91
Scn1a-202ENSMUST00000094951 Txndc2Q6P902 515 aa9.39□□□□□ -0.91
Scn1a-202ENSMUST00000094951 CftrP26361 1476 aa9.39□□□□□ -0.91
Scn1a-202ENSMUST00000094951 Stard8Q8K031 1019 aa9.38□□□□□ -0.91
Scn1a-202ENSMUST00000094951 Stk24Q99KH8 431 aa9.38□□□□□ -0.91
Scn1a-202ENSMUST00000094951 Supt5hO55201 1082 aaKnown RBP9.37□□□□□ -0.91
Scn1a-202ENSMUST00000094951 CntlnA2AM05 1397 aa9.37□□□□□ -0.91
Scn1a-202ENSMUST00000094951 Mrc2Q64449 1479 aa9.36□□□□□ -0.91
Scn1a-202ENSMUST00000094951 Mapk8ip3Q9ESN9 1337 aa9.35□□□□□ -0.91
Scn1a-202ENSMUST00000094951 Fbln2P37889 1221 aa9.35□□□□□ -0.91
Scn1a-202ENSMUST00000094951 Kdm2aP59997 1161 aa9.35□□□□□ -0.91
Scn1a-202ENSMUST00000094951 Fyco1Q8VDC1 1437 aa9.34□□□□□ -0.91
Scn1a-202ENSMUST00000094951 NudcO35685 332 aaKnown RBP9.34□□□□□ -0.91
Scn1a-202ENSMUST00000094951 Rgl3Q3UYI5 709 aa9.34□□□□□ -0.91
Scn1a-202ENSMUST00000094951 Aebp1Q640N1 1128 aa9.34□□□□□ -0.91
Scn1a-202ENSMUST00000094951 Map4P27546 1125 aaKnown RBP9.33□□□□□ -0.92
Scn1a-202ENSMUST00000094951 Aplp2Q06335 707 aa9.33□□□□□ -0.92
Scn1a-202ENSMUST00000094951 Fgd6Q69ZL1 1399 aa9.33□□□□□ -0.92
Scn1a-202ENSMUST00000094951 Iqgap2Q3UQ44 1575 aa9.33□□□□□ -0.92
Scn1a-202ENSMUST00000094951 NgefQ8CHT1 710 aa9.32□□□□□ -0.92
Scn1a-202ENSMUST00000094951 Jph4Q80WT0 628 aa9.31□□□□□ -0.92
Scn1a-202ENSMUST00000094951 Cecr2E9Q2Z1 1453 aa9.31□□□□□ -0.92
Scn1a-202ENSMUST00000094951 Cttnbp2B9EJA2 1648 aa9.3□□□□□ -0.92
Scn1a-202ENSMUST00000094951 Anp32aO35381 247 aa9.3□□□□□ -0.92
Scn1a-202ENSMUST00000094951 Ppargc1bQ8VHJ7 1014 aa9.3□□□□□ -0.92
Scn1a-202ENSMUST00000094951 Ap3b2Q9JME5 1082 aa9.29□□□□□ -0.92
Scn1a-202ENSMUST00000094951 CadpsQ80TJ1 1355 aa9.29□□□□□ -0.92
Scn1a-202ENSMUST00000094951 Card11Q8CIS0 1159 aa9.28□□□□□ -0.92
Scn1a-202ENSMUST00000094951 Hsp90aa1P07901 733 aaKnown RBP9.28□□□□□ -0.92
Scn1a-202ENSMUST00000094951 Kif3bQ61771 747 aa9.28□□□□□ -0.92
Scn1a-202ENSMUST00000094951 Cyb5rlB1AS42 316 aa9.28□□□□□ -0.92
Scn1a-202ENSMUST00000094951 Rab11fip3Q8CHD8 1047 aa9.27□□□□□ -0.92
Scn1a-202ENSMUST00000094951 Cc2d2bA0A286YDU8 1405 aa9.27□□□□□ -0.93
Scn1a-202ENSMUST00000094951 Dnai2A2AC93 623 aa9.27□□□□□ -0.93
Scn1a-202ENSMUST00000094951 Efcab5A0JP43 1406 aa9.26□□□□□ -0.93
Scn1a-202ENSMUST00000094951 Ift140E9PY46 1464 aa9.26□□□□□ -0.93
Scn1a-202ENSMUST00000094951 Gm6268A2A3U9 297 aa9.26□□□□□ -0.93
Scn1a-202ENSMUST00000094951 Fhad1A6PWD2 1420 aa9.26□□□□□ -0.93
Scn1a-202ENSMUST00000094951 Polr1aO35134 1717 aaKnown RBP9.26□□□□□ -0.93
Scn1a-202ENSMUST00000094951 Pde3bQ61409 1100 aa9.26□□□□□ -0.93
Scn1a-202ENSMUST00000094951 Gtf2e1Q9D0D5 440 aa9.25□□□□□ -0.93
Scn1a-202ENSMUST00000094951 Plekhh2Q8C115 1491 aa9.25□□□□□ -0.93
Scn1a-202ENSMUST00000094951 Urb2E9Q7L1 1524 aaKnown RBP9.25□□□□□ -0.93
Scn1a-202ENSMUST00000094951 Rtf1A2AQ19 715 aaKnown RBP9.25□□□□□ -0.93
Scn1a-202ENSMUST00000094951 Bcl11bQ99PV8 884 aa9.24□□□□□ -0.93
Scn1a-202ENSMUST00000094951 Eid3Q3V124 375 aa9.24□□□□□ -0.93
Scn1a-202ENSMUST00000094951 Sart1Q9Z315 806 aaKnown RBP9.23□□□□□ -0.93
Scn1a-202ENSMUST00000094951 Egfem1Q8C088 590 aa9.23□□□□□ -0.93
Scn1a-202ENSMUST00000094951 Sf3b2Q3UJB0 878 aaKnown RBP9.22□□□□□ -0.93
Scn1a-202ENSMUST00000094951 Nol10Q5RJG1 687 aaKnown RBP9.22□□□□□ -0.93
Scn1a-202ENSMUST00000094951 CenpjQ569L8 1344 aa9.22□□□□□ -0.93
Scn1a-202ENSMUST00000094951 Prdm16A2A935 1275 aa9.22□□□□□ -0.93
Scn1a-202ENSMUST00000094951 Cep162Q6ZQ06 1403 aa9.21□□□□□ -0.93
Scn1a-202ENSMUST00000094951 Atf3Q60765 181 aa9.21□□□□□ -0.93
Scn1a-202ENSMUST00000094951 Aebp2Q9Z248 504 aaKnown RBP9.21□□□□□ -0.94
Scn1a-202ENSMUST00000094951 Ppm1fQ8CGA0 452 aa9.2□□□□□ -0.94
Retrieved 100 of 22,080 RNA–protein pairs in 123.1 ms