RNA–Protein interactions for RNA: ENSMUST00000088355.11

Col2a1-202, Transcript of Collagen alpha-1(II) chain, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Col2a1, Length 4,862 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Col2a1-202ENSMUST00000088355 Sycp2Q9CUU3 1500 aa19.21■□□□□ 0.67
Col2a1-202ENSMUST00000088355 Csrnp3P59055 597 aa19.2■□□□□ 0.66
Col2a1-202ENSMUST00000088355 DiexfQ8BTT6 772 aaKnown RBP19.2■□□□□ 0.66
Col2a1-202ENSMUST00000088355 Rangap1P46061 589 aaKnown RBP19.19■□□□□ 0.66
Col2a1-202ENSMUST00000088355 Rgl3Q3UYI5 709 aa19.16■□□□□ 0.66
Col2a1-202ENSMUST00000088355 Mrs2Q5NCE8 434 aa19.15■□□□□ 0.66
Col2a1-202ENSMUST00000088355 Rad21Q61550 635 aaKnown RBP19.15■□□□□ 0.66
Col2a1-202ENSMUST00000088355 Upf2A2AT37 1269 aaKnown RBP19.13■□□□□ 0.65
Col2a1-202ENSMUST00000088355 Mtus2Q3UHD3 1353 aa19.12■□□□□ 0.65
Col2a1-202ENSMUST00000088355 ArxO35085 564 aa19.11■□□□□ 0.65
Col2a1-202ENSMUST00000088355 Gm38655A0A286YDK6 273 aa19.1■□□□□ 0.65
Col2a1-202ENSMUST00000088355 DaxxO35613 739 aa19.1■□□□□ 0.65
Col2a1-202ENSMUST00000088355 Rrp7aQ9D1C9 280 aaKnown RBP19.1■□□□□ 0.65
Col2a1-202ENSMUST00000088355 IqubQ8CDK3 788 aa19.1■□□□□ 0.65
Col2a1-202ENSMUST00000088355 Fmn1Q05860 1466 aa19.09■□□□□ 0.65
Col2a1-202ENSMUST00000088355 Crybg2B7ZCC2 1516 aa19.07■□□□□ 0.64
Col2a1-202ENSMUST00000088355 Mroh3A0A1D5RM54 893 aa19.07■□□□□ 0.64
Col2a1-202ENSMUST00000088355 Srpk2O54781 681 aaKnown RBP19.05■□□□□ 0.64
Col2a1-202ENSMUST00000088355 Kdm2aP59997 1161 aa19.02■□□□□ 0.64
Col2a1-202ENSMUST00000088355 Phldb1Q6PDH0 1371 aaKnown RBP19.01■□□□□ 0.63
Col2a1-202ENSMUST00000088355 Kif27Q7M6Z4 1394 aa19■□□□□ 0.63
Col2a1-202ENSMUST00000088355 Anks4bQ8K3X6 423 aa19■□□□□ 0.63
Col2a1-202ENSMUST00000088355 Mia2Q91ZV0 1396 aa18.99■□□□□ 0.63
Col2a1-202ENSMUST00000088355 Calr4Q3TQS0 420 aa18.99■□□□□ 0.63
Col2a1-202ENSMUST00000088355 Cux2P70298 1426 aa18.98■□□□□ 0.63
Col2a1-202ENSMUST00000088355 Ppp1r18Q8BQ30 594 aa18.97■□□□□ 0.63
Col2a1-202ENSMUST00000088355 Gm20521D3Z5F7 333 aa18.97■□□□□ 0.63
Col2a1-202ENSMUST00000088355 Grwd1Q810D6 446 aaKnown RBP18.96■□□□□ 0.63
Col2a1-202ENSMUST00000088355 Atad2bE9Q166 1460 aaKnown RBP18.95■□□□□ 0.62
Col2a1-202ENSMUST00000088355 AknaQ80VW7 1404 aa18.95■□□□□ 0.62
Col2a1-202ENSMUST00000088355 MyclP10166 368 aa18.94■□□□□ 0.62
Col2a1-202ENSMUST00000088355 Ppp4r2Q0VGB7 417 aa18.94■□□□□ 0.62
Col2a1-202ENSMUST00000088355 CftrP26361 1476 aa18.92■□□□□ 0.62
Col2a1-202ENSMUST00000088355 Cwc22Q8C5N3 908 aaKnown RBP18.92■□□□□ 0.62
Col2a1-202ENSMUST00000088355 Card11Q8CIS0 1159 aa18.91■□□□□ 0.62
Col2a1-202ENSMUST00000088355 Exosc9Q9JHI7 438 aaKnown RBP18.91■□□□□ 0.62
Col2a1-202ENSMUST00000088355 Ccdc88bQ4QRL3 1481 aa18.9■□□□□ 0.62
Col2a1-202ENSMUST00000088355 Aebp1Q640N1 1128 aa18.9■□□□□ 0.62
Col2a1-202ENSMUST00000088355 Cep162Q6ZQ06 1403 aa18.9■□□□□ 0.62
Col2a1-202ENSMUST00000088355 Stk24Q99KH8 431 aa18.88■□□□□ 0.61
Col2a1-202ENSMUST00000088355 Trim26Q99PN3 545 aa18.87■□□□□ 0.61
Col2a1-202ENSMUST00000088355 Arid3cA6PWV5 409 aa18.86■□□□□ 0.61
Col2a1-202ENSMUST00000088355 Aebp2Q9Z248 504 aaKnown RBP18.85■□□□□ 0.61
Col2a1-202ENSMUST00000088355 Rpap1Q80TE0 1409 aa18.85■□□□□ 0.61
Col2a1-202ENSMUST00000088355 Fgd1P52734 960 aa18.83■□□□□ 0.6
Col2a1-202ENSMUST00000088355 Lemd3Q9WU40 921 aa18.82■□□□□ 0.6
Col2a1-202ENSMUST00000088355 Baz1bQ9Z277 1479 aa18.81■□□□□ 0.6
Col2a1-202ENSMUST00000088355 Zfp777B9EKF4 885 aa18.8■□□□□ 0.6
Col2a1-202ENSMUST00000088355 Map4P27546 1125 aaKnown RBP18.8■□□□□ 0.6
Col2a1-202ENSMUST00000088355 Stag3O70576 1240 aa18.8■□□□□ 0.6
Col2a1-202ENSMUST00000088355 Wdr43Q6ZQL4 677 aaKnown RBP18.79■□□□□ 0.6
Col2a1-202ENSMUST00000088355 Cecr2E9Q2Z1 1453 aa18.78■□□□□ 0.6
Col2a1-202ENSMUST00000088355 Irx6Q9ER75 438 aa18.77■□□□□ 0.59
Col2a1-202ENSMUST00000088355 Fyco1Q8VDC1 1437 aa18.75■□□□□ 0.59
Col2a1-202ENSMUST00000088355 Dhx57Q6P5D3 1388 aaKnown RBP18.75■□□□□ 0.59
Col2a1-202ENSMUST00000088355 CntlnA2AM05 1397 aa18.74■□□□□ 0.59
Col2a1-202ENSMUST00000088355 Smarca4Q3TKT4 1613 aaKnown RBP18.72■□□□□ 0.59
Col2a1-202ENSMUST00000088355 Ofd1Q80Z25 1017 aa18.72■□□□□ 0.59
Col2a1-202ENSMUST00000088355 Carmil1Q6EDY6 1374 aa18.72■□□□□ 0.59
Col2a1-202ENSMUST00000088355 Aplp2Q06335 707 aa18.71■□□□□ 0.59
Col2a1-202ENSMUST00000088355 Smarca2Q6DIC0 1577 aa18.7■□□□□ 0.58
Col2a1-202ENSMUST00000088355 LrpprcQ6PB66 1392 aaKnown RBP18.7■□□□□ 0.58
Col2a1-202ENSMUST00000088355 NgefQ8CHT1 710 aa18.7■□□□□ 0.58
Col2a1-202ENSMUST00000088355 Mapk8ip3Q9ESN9 1337 aa18.7■□□□□ 0.58
Col2a1-202ENSMUST00000088355 ScribQ80U72 1612 aa18.69■□□□□ 0.58
Col2a1-202ENSMUST00000088355 Pkd2O35245 966 aa18.67■□□□□ 0.58
Col2a1-202ENSMUST00000088355 Iqcf3Q9D498 203 aa18.67■□□□□ 0.58
Col2a1-202ENSMUST00000088355 Rsph4aQ8BYM7 716 aa18.66■□□□□ 0.58
Col2a1-202ENSMUST00000088355 Cabp1Q9JLK7 227 aa18.64■□□□□ 0.57
Col2a1-202ENSMUST00000088355 Synj1Q8CHC4 1574 aa18.63■□□□□ 0.57
Col2a1-202ENSMUST00000088355 Hspa5P20029 655 aaKnown RBP18.62■□□□□ 0.57
Col2a1-202ENSMUST00000088355 Neurod2Q62414 383 aa18.62■□□□□ 0.57
Col2a1-202ENSMUST00000088355 Apbb1Q9QXJ1 710 aa18.61■□□□□ 0.57
Col2a1-202ENSMUST00000088355 Dhx29Q6PGC1 1365 aaKnown RBP18.61■□□□□ 0.57
Col2a1-202ENSMUST00000088355 Trak1Q6PD31 939 aa18.6■□□□□ 0.57
Col2a1-202ENSMUST00000088355 Trim30dE9PWL0 497 aa18.58■□□□□ 0.57
Col2a1-202ENSMUST00000088355 Arhgap35Q91YM2 1499 aa18.58■□□□□ 0.56
Col2a1-202ENSMUST00000088355 Cnga1P29974 684 aa18.56■□□□□ 0.56
Col2a1-202ENSMUST00000088355 Arid4bA2CG63 1314 aaKnown RBP18.55■□□□□ 0.56
Col2a1-202ENSMUST00000088355 Gtf2e1Q9D0D5 440 aa18.55■□□□□ 0.56
Col2a1-202ENSMUST00000088355 Pabpn1Q8CCS6 302 aaKnown RBP18.54■□□□□ 0.56
Col2a1-202ENSMUST00000088355 NudcO35685 332 aaKnown RBP18.54■□□□□ 0.56
Col2a1-202ENSMUST00000088355 Kif3bQ61771 747 aa18.54■□□□□ 0.56
Col2a1-202ENSMUST00000088355 Ifit1bl1D3Z6F0 470 aa18.54■□□□□ 0.56
Col2a1-202ENSMUST00000088355 Mphosph9A6H5Y1 991 aa18.54■□□□□ 0.56
Col2a1-202ENSMUST00000088355 Cttnbp2B9EJA2 1648 aa18.53■□□□□ 0.56
Col2a1-202ENSMUST00000088355 Fhad1A6PWD2 1420 aa18.53■□□□□ 0.56
Col2a1-202ENSMUST00000088355 Chmp4bQ9D8B3 224 aaKnown RBP18.52■□□□□ 0.56
Col2a1-202ENSMUST00000088355 Rundc1Q0VDN7 615 aa18.52■□□□□ 0.56
Col2a1-202ENSMUST00000088355 DekQ7TNV0 380 aaKnown RBP18.51■□□□□ 0.55
Col2a1-202ENSMUST00000088355 Psme1P97371 249 aa18.5■□□□□ 0.55
Col2a1-202ENSMUST00000088355 Vsig10D3YX43 558 aa18.5■□□□□ 0.55
Col2a1-202ENSMUST00000088355 MlecQ6ZQI3 291 aaKnown RBP18.5■□□□□ 0.55
Col2a1-202ENSMUST00000088355 Plekhh2Q8C115 1491 aa18.5■□□□□ 0.55
Col2a1-202ENSMUST00000088355 Gm6268A2A3U9 297 aa18.49■□□□□ 0.55
Col2a1-202ENSMUST00000088355 Txndc2Q6P902 515 aa18.49■□□□□ 0.55
Col2a1-202ENSMUST00000088355 Sart1Q9Z315 806 aaKnown RBP18.49■□□□□ 0.55
Col2a1-202ENSMUST00000088355 Hsp90ab1P11499 724 aaKnown RBP18.49■□□□□ 0.55
Col2a1-202ENSMUST00000088355 Stk26Q99JT2 416 aa18.49■□□□□ 0.55
Col2a1-202ENSMUST00000088355 CanxP35564 591 aaKnown RBP18.48■□□□□ 0.55
Retrieved 100 of 22,080 RNA–protein pairs in 50.7 ms