RNA–Protein interactions for RNA: ENSMUST00000078886.9

Spen-201, Transcript of Msx2-interacting protein, mousemouse

APPRIS ALT2 TSL 5 BASIC

Gene Spen, Length 12,082 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Spen-201ENSMUST00000078886 Arid4bA2CG63 1314 aaKnown RBP10.81□□□□□ -0.68
Spen-201ENSMUST00000078886 Plcb2A3KGF7 1181 aa10.8□□□□□ -0.68
Spen-201ENSMUST00000078886 Atp1b4Q99ME6 356 aa10.79□□□□□ -0.68
Spen-201ENSMUST00000078886 Gm13697A2AK42 830 aa10.77□□□□□ -0.68
Spen-201ENSMUST00000078886 Rad21Q61550 635 aaKnown RBP10.77□□□□□ -0.68
Spen-201ENSMUST00000078886 Npm1Q61937 292 aaKnown RBP10.76□□□□□ -0.69
Spen-201ENSMUST00000078886 Taok2Q6ZQ29 1240 aa10.76□□□□□ -0.69
Spen-201ENSMUST00000078886 Clip1Q922J3 1391 aa10.75□□□□□ -0.69
Spen-201ENSMUST00000078886 Mrs2Q5NCE8 434 aa10.75□□□□□ -0.69
Spen-201ENSMUST00000078886 Adam1bQ8R534 806 aa10.75□□□□□ -0.69
Spen-201ENSMUST00000078886 Znf326O88291 580 aa10.74□□□□□ -0.69
Spen-201ENSMUST00000078886 Trim30dE9PWL0 497 aa10.74□□□□□ -0.69
Spen-201ENSMUST00000078886 Htatsf1Q8BGC0 757 aa10.74□□□□□ -0.69
Spen-201ENSMUST00000078886 AU015836B2RUM3 263 aa10.69□□□□□ -0.7
Spen-201ENSMUST00000078886 Mak16Q8BGS0 296 aaKnown RBP10.69□□□□□ -0.7
Spen-201ENSMUST00000078886 Gm35339A0A140LHH9 1649 aa10.67□□□□□ -0.7
Spen-201ENSMUST00000078886 Spryd3E9Q9B3 442 aa10.67□□□□□ -0.7
Spen-201ENSMUST00000078886 MsnP26041 577 aaKnown RBP10.66□□□□□ -0.7
Spen-201ENSMUST00000078886 Fgd1P52734 960 aa10.64□□□□□ -0.71
Spen-201ENSMUST00000078886 Calcoco2A2A6M5 331 aa10.64□□□□□ -0.71
Spen-201ENSMUST00000078886 Cep164Q5DU05 1446 aa10.64□□□□□ -0.71
Spen-201ENSMUST00000078886 Dnttip2Q8R2M2 758 aaKnown RBP10.63□□□□□ -0.71
Spen-201ENSMUST00000078886 Pknox2Q8BG99 474 aa10.63□□□□□ -0.71
Spen-201ENSMUST00000078886 BccipQ9CWI3 316 aa10.63□□□□□ -0.71
Spen-201ENSMUST00000078886 Gm13695A2AK44 830 aa10.62□□□□□ -0.71
Spen-201ENSMUST00000078886 Ifnlr1Q8CGK5 535 aa10.62□□□□□ -0.71
Spen-201ENSMUST00000078886 Casc1Q6TDU8 730 aa10.61□□□□□ -0.71
Spen-201ENSMUST00000078886 Erich6bQ9D4S6 220 aa10.6□□□□□ -0.71
Spen-201ENSMUST00000078886 PnnO35691 725 aaKnown RBP10.6□□□□□ -0.71
Spen-201ENSMUST00000078886 Ppm1gQ61074 542 aa10.58□□□□□ -0.72
Spen-201ENSMUST00000078886 Trim26Q99PN3 545 aa10.58□□□□□ -0.72
Spen-201ENSMUST00000078886 SetQ9EQU5 289 aaKnown RBP10.58□□□□□ -0.72
Spen-201ENSMUST00000078886 Ofd1Q80Z25 1017 aa10.57□□□□□ -0.72
Spen-201ENSMUST00000078886 Map7d2A2AG50 781 aa10.57□□□□□ -0.72
Spen-201ENSMUST00000078886 P3h3Q8CG70 732 aa10.57□□□□□ -0.72
Spen-201ENSMUST00000078886 Chic2Q9D9G3 165 aa10.56□□□□□ -0.72
Spen-201ENSMUST00000078886 Aebp2Q9Z248 504 aaKnown RBP10.54□□□□□ -0.72
Spen-201ENSMUST00000078886 Fkbp15Q6P9Q6 1216 aaKnown RBP10.53□□□□□ -0.72
Spen-201ENSMUST00000078886 Brd4Q9ESU6 1400 aaKnown RBP10.52□□□□□ -0.73
Spen-201ENSMUST00000078886 Rrp12Q6P5B0 1295 aaKnown RBP10.51□□□□□ -0.73
Spen-201ENSMUST00000078886 Kiaa0754Q69ZZ9 979 aa10.5□□□□□ -0.73
Spen-201ENSMUST00000078886 BlmO88700 1416 aa10.5□□□□□ -0.73
Spen-201ENSMUST00000078886 Q8BT18 775 aa10.49□□□□□ -0.73
Spen-201ENSMUST00000078886 Clstn2Q9ER65 966 aa10.49□□□□□ -0.73
Spen-201ENSMUST00000078886 Gtf3c3Q3TMP1 882 aa10.49□□□□□ -0.73
Spen-201ENSMUST00000078886 Dbr1Q923B1 550 aa10.47□□□□□ -0.73
Spen-201ENSMUST00000078886 Fbxo2Q80UW2 297 aa10.46□□□□□ -0.73
Spen-201ENSMUST00000078886 Apbb1Q9QXJ1 710 aa10.46□□□□□ -0.73
Spen-201ENSMUST00000078886 Gm973E9Q295 1059 aa10.46□□□□□ -0.74
Spen-201ENSMUST00000078886 Rgl3Q3UYI5 709 aa10.45□□□□□ -0.74
Spen-201ENSMUST00000078886 IbspQ61711 324 aa10.45□□□□□ -0.74
Spen-201ENSMUST00000078886 Pes1Q9EQ61 584 aaKnown RBP10.43□□□□□ -0.74
Spen-201ENSMUST00000078886 SafbD3YXK2 937 aaKnown RBP10.43□□□□□ -0.74
Spen-201ENSMUST00000078886 Map7O88735 730 aa10.43□□□□□ -0.74
Spen-201ENSMUST00000078886 Cwc22Q8C5N3 908 aaKnown RBP10.42□□□□□ -0.74
Spen-201ENSMUST00000078886 4933402E13RikQ9D4D2 429 aa10.42□□□□□ -0.74
Spen-201ENSMUST00000078886 B4galnt3Q6L8S8 986 aa10.41□□□□□ -0.74
Spen-201ENSMUST00000078886 Rtn4Q99P72 1162 aaKnown RBP10.41□□□□□ -0.74
Spen-201ENSMUST00000078886 Trim30aP15533 496 aa10.4□□□□□ -0.74
Spen-201ENSMUST00000078886 Gpatch11Q3UFS4 262 aa10.4□□□□□ -0.74
Spen-201ENSMUST00000078886 Abcc8B2RUS7 1588 aa10.4□□□□□ -0.74
Spen-201ENSMUST00000078886 Ftsj3Q9DBE9 838 aaKnown RBP10.4□□□□□ -0.74
Spen-201ENSMUST00000078886 Chmp4bQ9D8B3 224 aaKnown RBP10.4□□□□□ -0.74
Spen-201ENSMUST00000078886 Armcx1Q9CX83 456 aa10.4□□□□□ -0.74
Spen-201ENSMUST00000078886 Irx6Q9ER75 438 aa10.4□□□□□ -0.74
Spen-201ENSMUST00000078886 RdxP26043 583 aaKnown RBP10.39□□□□□ -0.75
Spen-201ENSMUST00000078886 Mbd3Q9Z2D8 285 aaKnown RBP10.38□□□□□ -0.75
Spen-201ENSMUST00000078886 Neurod2Q62414 383 aa10.38□□□□□ -0.75
Spen-201ENSMUST00000078886 Clstn1Q9EPL2 979 aa10.38□□□□□ -0.75
Spen-201ENSMUST00000078886 Hsp90b1P08113 802 aaKnown RBP10.38□□□□□ -0.75
Spen-201ENSMUST00000078886 PrkcshO08795 521 aa10.38□□□□□ -0.75
Spen-201ENSMUST00000078886 Tcerg1Q8CGF7 1100 aaKnown RBP10.38□□□□□ -0.75
Spen-201ENSMUST00000078886 VgfQ0VGU4 617 aa10.38□□□□□ -0.75
Spen-201ENSMUST00000078886 Setd5Q5XJV7 1441 aa10.37□□□□□ -0.75
Spen-201ENSMUST00000078886 Ddrgk1Q80WW9 315 aa10.36□□□□□ -0.75
Spen-201ENSMUST00000078886 Pcmtd1P59913 357 aa10.36□□□□□ -0.75
Spen-201ENSMUST00000078886 Slc4a3P16283 1227 aa10.36□□□□□ -0.75
Spen-201ENSMUST00000078886 Wwc2Q6NXJ0 1187 aa10.36□□□□□ -0.75
Spen-201ENSMUST00000078886 KnstrnQ9D9Z1 312 aaKnown RBP10.36□□□□□ -0.75
Spen-201ENSMUST00000078886 Anapc15P60007 132 aa10.35□□□□□ -0.75
Spen-201ENSMUST00000078886 Grwd1Q810D6 446 aaKnown RBP10.35□□□□□ -0.75
Spen-201ENSMUST00000078886 Card11Q8CIS0 1159 aa10.35□□□□□ -0.75
Spen-201ENSMUST00000078886 Becn1O88597 448 aa10.34□□□□□ -0.75
Spen-201ENSMUST00000078886 IqubQ8CDK3 788 aa10.34□□□□□ -0.75
Spen-201ENSMUST00000078886 Dnai1Q8C0M8 701 aa10.34□□□□□ -0.75
Spen-201ENSMUST00000078886 Mapk8ip3Q9ESN9 1337 aa10.33□□□□□ -0.76
Spen-201ENSMUST00000078886 Supt16hQ920B9 1047 aa10.33□□□□□ -0.76
Spen-201ENSMUST00000078886 SlkO54988 1233 aa10.33□□□□□ -0.76
Spen-201ENSMUST00000078886 Prm3Q62100 101 aa10.33□□□□□ -0.76
Spen-201ENSMUST00000078886 Rwdd1Q9CQK7 243 aa10.33□□□□□ -0.76
Spen-201ENSMUST00000078886 Rb1cc1Q9ESK9 1588 aa10.33□□□□□ -0.76
Spen-201ENSMUST00000078886 Kdm2aP59997 1161 aa10.33□□□□□ -0.76
Spen-201ENSMUST00000078886 Ipo9Q91YE6 1041 aa10.33□□□□□ -0.76
Spen-201ENSMUST00000078886 PtmsQ9D0J8 101 aaKnown RBP10.32□□□□□ -0.76
Spen-201ENSMUST00000078886 Plppr3Q7TPB0 716 aa10.32□□□□□ -0.76
Spen-201ENSMUST00000078886 MccE9PWI3 1003 aa10.32□□□□□ -0.76
Spen-201ENSMUST00000078886 Cald1E9QA15 768 aaKnown RBP10.32□□□□□ -0.76
Spen-201ENSMUST00000078886 CalrP14211 416 aaKnown RBP10.31□□□□□ -0.76
Spen-201ENSMUST00000078886 NudcO35685 332 aaKnown RBP10.3□□□□□ -0.76
Spen-201ENSMUST00000078886 Noc3lQ8VI84 807 aaKnown RBP10.3□□□□□ -0.76
Retrieved 100 of 22,080 RNA–protein pairs in 64.3 ms