RNA–Protein interactions for RNA: ENSMUST00000071057.13

Ddx55-201, Transcript of ATP-dependent RNA helicase DDX55, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ddx55, Length 2,799 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx55-201ENSMUST00000071057 LrpprcQ6PB66 1392 aaKnown RBP16.88■□□□□ 0.29
Ddx55-201ENSMUST00000071057 Pknox2Q8BG99 474 aa16.87■□□□□ 0.29
Ddx55-201ENSMUST00000071057 Mrc2Q64449 1479 aa16.86■□□□□ 0.29
Ddx55-201ENSMUST00000071057 Gm38655A0A286YDK6 273 aa16.83■□□□□ 0.28
Ddx55-201ENSMUST00000071057 PogzQ8BZH4 1409 aaKnown RBP16.82■□□□□ 0.28
Ddx55-201ENSMUST00000071057 Duox2A2AQ99 1517 aa16.81■□□□□ 0.28
Ddx55-201ENSMUST00000071057 Efcab5A0JP43 1406 aa16.81■□□□□ 0.28
Ddx55-201ENSMUST00000071057 Gtf3c5Q8R2T8 520 aa16.8■□□□□ 0.28
Ddx55-201ENSMUST00000071057 Arhgef5E9Q7D5 1581 aa16.78■□□□□ 0.28
Ddx55-201ENSMUST00000071057 Dhx29Q6PGC1 1365 aaKnown RBP16.76■□□□□ 0.27
Ddx55-201ENSMUST00000071057 Ankrd26Q811D2 1581 aa16.74■□□□□ 0.27
Ddx55-201ENSMUST00000071057 Ifnlr1Q8CGK5 535 aa16.73■□□□□ 0.27
Ddx55-201ENSMUST00000071057 AqrQ8CFQ3 1481 aaKnown RBP16.72■□□□□ 0.27
Ddx55-201ENSMUST00000071057 Samd9lQ69Z37 1561 aa16.72■□□□□ 0.27
Ddx55-201ENSMUST00000071057 Carmil1Q6EDY6 1374 aa16.71■□□□□ 0.27
Ddx55-201ENSMUST00000071057 ArxO35085 564 aa16.71■□□□□ 0.26
Ddx55-201ENSMUST00000071057 Ncapd3Q6ZQK0 1506 aa16.7■□□□□ 0.26
Ddx55-201ENSMUST00000071057 Cux1P53564 1515 aa16.69■□□□□ 0.26
Ddx55-201ENSMUST00000071057 Erich3F6QRE9 1637 aa16.68■□□□□ 0.26
Ddx55-201ENSMUST00000071057 Tiam1Q60610 1591 aa16.68■□□□□ 0.26
Ddx55-201ENSMUST00000071057 Rad54l2Q99NG0 1466 aa16.68■□□□□ 0.26
Ddx55-201ENSMUST00000071057 BlmO88700 1416 aa16.67■□□□□ 0.26
Ddx55-201ENSMUST00000071057 Pcf11G3X9Z4 1553 aa16.67■□□□□ 0.26
Ddx55-201ENSMUST00000071057 Kif21aQ9QXL2 1672 aa16.66■□□□□ 0.26
Ddx55-201ENSMUST00000071057 Lmod2Q3UHZ5 550 aa16.66■□□□□ 0.26
Ddx55-201ENSMUST00000071057 Naip1Q9QWK5 1403 aa16.65■□□□□ 0.26
Ddx55-201ENSMUST00000071057 SynmQ70IV5 1561 aa16.65■□□□□ 0.26
Ddx55-201ENSMUST00000071057 Crocc2F6XLV1 1638 aa16.63■□□□□ 0.25
Ddx55-201ENSMUST00000071057 Slx4Q6P1D7 1565 aa16.62■□□□□ 0.25
Ddx55-201ENSMUST00000071057 BccipQ9CWI3 316 aa16.6■□□□□ 0.25
Ddx55-201ENSMUST00000071057 Fgd1P52734 960 aa16.6■□□□□ 0.25
Ddx55-201ENSMUST00000071057 Lmo7E9PYF4 1699 aaKnown RBP16.59■□□□□ 0.25
Ddx55-201ENSMUST00000071057 Sall2Q9QX96 1004 aa16.58■□□□□ 0.24
Ddx55-201ENSMUST00000071057 Urb2E9Q7L1 1524 aaKnown RBP16.56■□□□□ 0.24
Ddx55-201ENSMUST00000071057 Csrnp3P59055 597 aa16.56■□□□□ 0.24
Ddx55-201ENSMUST00000071057 Fyco1Q8VDC1 1437 aa16.55■□□□□ 0.24
Ddx55-201ENSMUST00000071057 Aplp2Q06335 707 aa16.55■□□□□ 0.24
Ddx55-201ENSMUST00000071057 Wdr66E9Q743 1299 aa16.54■□□□□ 0.24
Ddx55-201ENSMUST00000071057 CntlnA2AM05 1397 aa16.53■□□□□ 0.24
Ddx55-201ENSMUST00000071057 TonslQ6NZL6 1363 aa16.53■□□□□ 0.24
Ddx55-201ENSMUST00000071057 Aebp1Q640N1 1128 aa16.53■□□□□ 0.24
Ddx55-201ENSMUST00000071057 Aebp2Q9Z248 504 aaKnown RBP16.53■□□□□ 0.24
Ddx55-201ENSMUST00000071057 NrdcQ8BHG1 1161 aa16.52■□□□□ 0.24
Ddx55-201ENSMUST00000071057 Plb1Q3TTY0 1478 aa16.51■□□□□ 0.23
Ddx55-201ENSMUST00000071057 Eid3Q3V124 375 aa16.51■□□□□ 0.23
Ddx55-201ENSMUST00000071057 Polr1aO35134 1717 aaKnown RBP16.5■□□□□ 0.23
Ddx55-201ENSMUST00000071057 Fam50aQ9WV03 339 aaKnown RBP16.49■□□□□ 0.23
Ddx55-201ENSMUST00000071057 Pla2r1Q62028 1487 aa16.49■□□□□ 0.23
Ddx55-201ENSMUST00000071057 Lrriq1Q0P5X1 1673 aa16.49■□□□□ 0.23
Ddx55-201ENSMUST00000071057 EprsQ8CGC7 1512 aaKnown RBP16.48■□□□□ 0.23
Ddx55-201ENSMUST00000071057 TimelessQ9R1X4 1197 aa16.47■□□□□ 0.23
Ddx55-201ENSMUST00000071057 Magi3Q9EQJ9 1476 aa16.47■□□□□ 0.23
Ddx55-201ENSMUST00000071057 Eif5bQ05D44 1216 aaKnown RBP16.45■□□□□ 0.22
Ddx55-201ENSMUST00000071057 Kdm5bQ80Y84 1544 aa16.45■□□□□ 0.22
Ddx55-201ENSMUST00000071057 Grin2aP35436 1464 aa16.45■□□□□ 0.22
Ddx55-201ENSMUST00000071057 Rpap1Q80TE0 1409 aa16.44■□□□□ 0.22
Ddx55-201ENSMUST00000071057 Ppargc1bQ8VHJ7 1014 aa16.43■□□□□ 0.22
Ddx55-201ENSMUST00000071057 Anks4bQ8K3X6 423 aa16.42■□□□□ 0.22
Ddx55-201ENSMUST00000071057 Disp1Q3TDN0 1521 aa16.41■□□□□ 0.22
Ddx55-201ENSMUST00000071057 CadpsQ80TJ1 1355 aa16.41■□□□□ 0.22
Ddx55-201ENSMUST00000071057 3425401B19RikD3Z1D3 1412 aa16.41■□□□□ 0.22
Ddx55-201ENSMUST00000071057 Peg3Q3URU2 1571 aa16.41■□□□□ 0.22
Ddx55-201ENSMUST00000071057 Gm1043A0A140LJC2 1431 aa16.4■□□□□ 0.22
Ddx55-201ENSMUST00000071057 TchhA0A0B4J1F9 1599 aa16.4■□□□□ 0.22
Ddx55-201ENSMUST00000071057 Gm7298A0A0N4SVU1 1476 aa16.38■□□□□ 0.21
Ddx55-201ENSMUST00000071057 WizO88286 1684 aaKnown RBP16.37■□□□□ 0.21
Ddx55-201ENSMUST00000071057 Eif4g3Q80XI3 1579 aaKnown RBP16.36■□□□□ 0.21
Ddx55-201ENSMUST00000071057 Gpatch8A2A6A1 1505 aa16.36■□□□□ 0.21
Ddx55-201ENSMUST00000071057 Setd1bQ8CFT2 1985 aa16.36■□□□□ 0.21
Ddx55-201ENSMUST00000071057 Abca5Q8K448 1642 aa16.35■□□□□ 0.21
Ddx55-201ENSMUST00000071057 Kif27Q7M6Z4 1394 aa16.33■□□□□ 0.2
Ddx55-201ENSMUST00000071057 ClspnQ80YR7 1315 aa16.32■□□□□ 0.2
Ddx55-201ENSMUST00000071057 Hdac5Q9Z2V6 1113 aa16.32■□□□□ 0.2
Ddx55-201ENSMUST00000071057 PxdnQ3UQ28 1475 aa16.32■□□□□ 0.2
Ddx55-201ENSMUST00000071057 Adamts12Q811B3 1600 aa16.31■□□□□ 0.2
Ddx55-201ENSMUST00000071057 Ift140E9PY46 1464 aa16.29■□□□□ 0.2
Ddx55-201ENSMUST00000071057 Ccnb3Q810T2 1396 aa16.29■□□□□ 0.2
Ddx55-201ENSMUST00000071057 Soga1E1U8D0 1418 aa16.26■□□□□ 0.19
Ddx55-201ENSMUST00000071057 Arhgap27A2AB59 869 aa16.26■□□□□ 0.19
Ddx55-201ENSMUST00000071057 Chic2Q9D9G3 165 aa16.26■□□□□ 0.19
Ddx55-201ENSMUST00000071057 Nup160Q9Z0W3 1402 aaKnown RBP16.25■□□□□ 0.19
Ddx55-201ENSMUST00000071057 WrnO09053 1401 aa16.24■□□□□ 0.19
Ddx55-201ENSMUST00000071057 Scaf1Q5U4C3 1256 aaKnown RBP16.24■□□□□ 0.19
Ddx55-201ENSMUST00000071057 Abca16E9PWJ7 1678 aa16.24■□□□□ 0.19
Ddx55-201ENSMUST00000071057 Rsph4aQ8BYM7 716 aa16.23■□□□□ 0.19
Ddx55-201ENSMUST00000071057 A2mQ6GQT1 1474 aa16.23■□□□□ 0.19
Ddx55-201ENSMUST00000071057 Mia2Q91ZV0 1396 aa16.23■□□□□ 0.19
Ddx55-201ENSMUST00000071057 Fhad1A6PWD2 1420 aa16.23■□□□□ 0.19
Ddx55-201ENSMUST00000071057 Naip2Q9QUK4 1447 aa16.22■□□□□ 0.19
Ddx55-201ENSMUST00000071057 BC005561E9Q5E2 1589 aa16.22■□□□□ 0.19
Ddx55-201ENSMUST00000071057 NexmifQ5DTT1 1515 aa16.21■□□□□ 0.19
Ddx55-201ENSMUST00000071057 Lmtk2Q3TYD6 1471 aa16.2■□□□□ 0.18
Ddx55-201ENSMUST00000071057 Pbrm1Q8BSQ9 1634 aaKnown RBP16.19■□□□□ 0.18
Ddx55-201ENSMUST00000071057 Vps8Q0P5W1 1427 aa16.18■□□□□ 0.18
Ddx55-201ENSMUST00000071057 Znf316Q6PGE4 1016 aa16.16■□□□□ 0.18
Ddx55-201ENSMUST00000071057 Cc2d2bA0A286YDU8 1405 aa16.14■□□□□ 0.17
Ddx55-201ENSMUST00000071057 Hspa5P20029 655 aaKnown RBP16.14■□□□□ 0.17
Ddx55-201ENSMUST00000071057 Abcc2Q8VI47 1543 aa16.13■□□□□ 0.17
Ddx55-201ENSMUST00000071057 Ccer2J3QPU5 274 aa16.13■□□□□ 0.17
Ddx55-201ENSMUST00000071057 Shroom2A2ALU4 1481 aa16.12■□□□□ 0.17
Retrieved 100 of 22,080 RNA–protein pairs in 6.8 ms