RNA–Protein interactions for RNA: ENSMUST00000068133.9

Rara-201, Transcript of Retinoic acid receptor alpha, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Rara, Length 3,384 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Rara-201ENSMUST00000068133 Ncapd3Q6ZQK0 1506 aa18.54■□□□□ 0.56
Rara-201ENSMUST00000068133 Eif4g3Q80XI3 1579 aaKnown RBP18.53■□□□□ 0.56
Rara-201ENSMUST00000068133 PogzQ8BZH4 1409 aaKnown RBP18.53■□□□□ 0.56
Rara-201ENSMUST00000068133 Ap3b1Q9Z1T1 1105 aa18.52■□□□□ 0.56
Rara-201ENSMUST00000068133 Duox2A2AQ99 1517 aa18.5■□□□□ 0.55
Rara-201ENSMUST00000068133 Erich3F6QRE9 1637 aa18.5■□□□□ 0.55
Rara-201ENSMUST00000068133 Ankrd26Q811D2 1581 aa18.5■□□□□ 0.55
Rara-201ENSMUST00000068133 Tiam1Q60610 1591 aa18.47■□□□□ 0.55
Rara-201ENSMUST00000068133 Plppr3Q7TPB0 716 aa18.46■□□□□ 0.55
Rara-201ENSMUST00000068133 Carmil1Q6EDY6 1374 aa18.45■□□□□ 0.54
Rara-201ENSMUST00000068133 Naip1Q9QWK5 1403 aa18.41■□□□□ 0.54
Rara-201ENSMUST00000068133 Las1lA2BE28 776 aaKnown RBP18.4■□□□□ 0.54
Rara-201ENSMUST00000068133 Dhx29Q6PGC1 1365 aaKnown RBP18.39■□□□□ 0.54
Rara-201ENSMUST00000068133 Pcf11G3X9Z4 1553 aa18.39■□□□□ 0.53
Rara-201ENSMUST00000068133 Cux1P53564 1515 aa18.38■□□□□ 0.53
Rara-201ENSMUST00000068133 Samd9lQ69Z37 1561 aa18.38■□□□□ 0.53
Rara-201ENSMUST00000068133 SynmQ70IV5 1561 aa18.36■□□□□ 0.53
Rara-201ENSMUST00000068133 Sall2Q9QX96 1004 aa18.36■□□□□ 0.53
Rara-201ENSMUST00000068133 Lmo7E9PYF4 1699 aaKnown RBP18.36■□□□□ 0.53
Rara-201ENSMUST00000068133 BlmO88700 1416 aa18.35■□□□□ 0.53
Rara-201ENSMUST00000068133 Slx4Q6P1D7 1565 aa18.33■□□□□ 0.53
Rara-201ENSMUST00000068133 CntlnA2AM05 1397 aa18.3■□□□□ 0.52
Rara-201ENSMUST00000068133 Urb2E9Q7L1 1524 aaKnown RBP18.3■□□□□ 0.52
Rara-201ENSMUST00000068133 TonslQ6NZL6 1363 aa18.3■□□□□ 0.52
Rara-201ENSMUST00000068133 Pbrm1Q8BSQ9 1634 aaKnown RBP18.29■□□□□ 0.52
Rara-201ENSMUST00000068133 Kdm5bQ80Y84 1544 aa18.29■□□□□ 0.52
Rara-201ENSMUST00000068133 Crocc2F6XLV1 1638 aa18.29■□□□□ 0.52
Rara-201ENSMUST00000068133 Fyco1Q8VDC1 1437 aa18.28■□□□□ 0.52
Rara-201ENSMUST00000068133 Rad54l2Q99NG0 1466 aa18.27■□□□□ 0.52
Rara-201ENSMUST00000068133 Aebp2Q9Z248 504 aaKnown RBP18.27■□□□□ 0.51
Rara-201ENSMUST00000068133 Polr1aO35134 1717 aaKnown RBP18.26■□□□□ 0.51
Rara-201ENSMUST00000068133 TchhA0A0B4J1F9 1599 aa18.26■□□□□ 0.51
Rara-201ENSMUST00000068133 Peg3Q3URU2 1571 aa18.23■□□□□ 0.51
Rara-201ENSMUST00000068133 Rpap1Q80TE0 1409 aa18.23■□□□□ 0.51
Rara-201ENSMUST00000068133 Wdr66E9Q743 1299 aa18.21■□□□□ 0.51
Rara-201ENSMUST00000068133 Shroom2A2ALU4 1481 aa18.21■□□□□ 0.51
Rara-201ENSMUST00000068133 Lmod2Q3UHZ5 550 aa18.2■□□□□ 0.5
Rara-201ENSMUST00000068133 Aebp1Q640N1 1128 aa18.2■□□□□ 0.5
Rara-201ENSMUST00000068133 Pla2r1Q62028 1487 aa18.16■□□□□ 0.5
Rara-201ENSMUST00000068133 EprsQ8CGC7 1512 aaKnown RBP18.15■□□□□ 0.5
Rara-201ENSMUST00000068133 ClspnQ80YR7 1315 aa18.15■□□□□ 0.5
Rara-201ENSMUST00000068133 Magi3Q9EQJ9 1476 aa18.13■□□□□ 0.49
Rara-201ENSMUST00000068133 Setd1bQ8CFT2 1985 aa18.13■□□□□ 0.49
Rara-201ENSMUST00000068133 3425401B19RikD3Z1D3 1412 aa18.13■□□□□ 0.49
Rara-201ENSMUST00000068133 Gm1043A0A140LJC2 1431 aa18.12■□□□□ 0.49
Rara-201ENSMUST00000068133 ArxO35085 564 aa18.12■□□□□ 0.49
Rara-201ENSMUST00000068133 Plb1Q3TTY0 1478 aa18.11■□□□□ 0.49
Rara-201ENSMUST00000068133 Eid3Q3V124 375 aa18.1■□□□□ 0.49
Rara-201ENSMUST00000068133 Rusc2Q80U22 1514 aa18.09■□□□□ 0.49
Rara-201ENSMUST00000068133 Grin2aP35436 1464 aa18.09■□□□□ 0.49
Rara-201ENSMUST00000068133 CadpsQ80TJ1 1355 aa18.08■□□□□ 0.49
Rara-201ENSMUST00000068133 Fam50aQ9WV03 339 aaKnown RBP18.08■□□□□ 0.48
Rara-201ENSMUST00000068133 Disp1Q3TDN0 1521 aa18.06■□□□□ 0.48
Rara-201ENSMUST00000068133 Abca5Q8K448 1642 aa18.06■□□□□ 0.48
Rara-201ENSMUST00000068133 Neurod1Q60867 357 aa18.05■□□□□ 0.48
Rara-201ENSMUST00000068133 Gm7298A0A0N4SVU1 1476 aa18.04■□□□□ 0.48
Rara-201ENSMUST00000068133 Adamts12Q811B3 1600 aa18.01■□□□□ 0.47
Rara-201ENSMUST00000068133 Ift140E9PY46 1464 aa18■□□□□ 0.47
Rara-201ENSMUST00000068133 Fhad1A6PWD2 1420 aa18■□□□□ 0.47
Rara-201ENSMUST00000068133 Mia2Q91ZV0 1396 aa18■□□□□ 0.47
Rara-201ENSMUST00000068133 WizO88286 1684 aaKnown RBP18■□□□□ 0.47
Rara-201ENSMUST00000068133 Naip2Q9QUK4 1447 aa17.97■□□□□ 0.47
Rara-201ENSMUST00000068133 Kif27Q7M6Z4 1394 aa17.96■□□□□ 0.47
Rara-201ENSMUST00000068133 Lmtk2Q3TYD6 1471 aa17.96■□□□□ 0.47
Rara-201ENSMUST00000068133 Soga1E1U8D0 1418 aa17.96■□□□□ 0.46
Rara-201ENSMUST00000068133 Vps8Q0P5W1 1427 aa17.96■□□□□ 0.46
Rara-201ENSMUST00000068133 Ccnb3Q810T2 1396 aa17.94■□□□□ 0.46
Rara-201ENSMUST00000068133 Ccer2J3QPU5 274 aa17.93■□□□□ 0.46
Rara-201ENSMUST00000068133 A2mQ6GQT1 1474 aa17.92■□□□□ 0.46
Rara-201ENSMUST00000068133 PxdnQ3UQ28 1475 aa17.92■□□□□ 0.46
Rara-201ENSMUST00000068133 Nup160Q9Z0W3 1402 aaKnown RBP17.91■□□□□ 0.46
Rara-201ENSMUST00000068133 Zcchc11B2RX14 1644 aaKnown RBP17.91■□□□□ 0.46
Rara-201ENSMUST00000068133 Ankrd36D3Z4K0 1415 aa17.89■□□□□ 0.46
Rara-201ENSMUST00000068133 Abca16E9PWJ7 1678 aa17.88■□□□□ 0.45
Rara-201ENSMUST00000068133 BC005561E9Q5E2 1589 aa17.87■□□□□ 0.45
Rara-201ENSMUST00000068133 NexmifQ5DTT1 1515 aa17.86■□□□□ 0.45
Rara-201ENSMUST00000068133 Gcc2Q8CHG3 1679 aa17.86■□□□□ 0.45
Rara-201ENSMUST00000068133 WrnO09053 1401 aa17.84■□□□□ 0.45
Rara-201ENSMUST00000068133 Nop58Q6DFW4 536 aaKnown RBP17.83■□□□□ 0.45
Rara-201ENSMUST00000068133 Cdk11bP24788 784 aaKnown RBP17.81■□□□□ 0.44
Rara-201ENSMUST00000068133 Dennd4bQ3U1Y4 1499 aa17.8■□□□□ 0.44
Rara-201ENSMUST00000068133 UacaQ8CGB3 1411 aa17.8■□□□□ 0.44
Rara-201ENSMUST00000068133 Chic2Q9D9G3 165 aa17.8■□□□□ 0.44
Rara-201ENSMUST00000068133 Cc2d2bA0A286YDU8 1405 aa17.79■□□□□ 0.44
Rara-201ENSMUST00000068133 Arid3aQ62431 601 aa17.78■□□□□ 0.44
Rara-201ENSMUST00000068133 Arhgap27A2AB59 869 aa17.78■□□□□ 0.44
Rara-201ENSMUST00000068133 Hspa5P20029 655 aaKnown RBP17.77■□□□□ 0.44
Rara-201ENSMUST00000068133 Mug1P28665 1476 aa17.77■□□□□ 0.43
Rara-201ENSMUST00000068133 Rapgef6Q5NCJ1 1609 aa17.76■□□□□ 0.43
Rara-201ENSMUST00000068133 Ncoa3O09000 1398 aa17.76■□□□□ 0.43
Rara-201ENSMUST00000068133 Abcc2Q8VI47 1543 aa17.76■□□□□ 0.43
Rara-201ENSMUST00000068133 Anks4bQ8K3X6 423 aa17.76■□□□□ 0.43
Rara-201ENSMUST00000068133 Col17a1Q07563 1470 aa17.75■□□□□ 0.43
Rara-201ENSMUST00000068133 Phf23Q8BSN5 401 aa17.75■□□□□ 0.43
Rara-201ENSMUST00000068133 NclP09405 707 aaKnown RBP17.73■□□□□ 0.43
Rara-201ENSMUST00000068133 Fhod3Q76LL6 1578 aa17.73■□□□□ 0.43
Rara-201ENSMUST00000068133 Rfx7F8VPJ6 1459 aa17.7■□□□□ 0.42
Rara-201ENSMUST00000068133 Cul7Q8VE73 1689 aa17.7■□□□□ 0.42
Rara-201ENSMUST00000068133 Arhgef11Q68FM7 1552 aa17.69■□□□□ 0.42
Rara-201ENSMUST00000068133 Abcc5Q9R1X5 1436 aa17.68■□□□□ 0.42
Retrieved 100 of 22,080 RNA–protein pairs in 65.7 ms