RNA–Protein interactions for RNA: ENSMUST00000068133.9

Rara-201, Transcript of Retinoic acid receptor alpha, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Rara, Length 3,384 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Rara-201ENSMUST00000068133 Gm35339A0A140LHH9 1649 aa24.84■■□□□ 1.57
Rara-201ENSMUST00000068133 NischQ80TM9 1593 aa24.54■■□□□ 1.52
Rara-201ENSMUST00000068133 Abcc9P70170 1546 aa23.83■■□□□ 1.41
Rara-201ENSMUST00000068133 Abcc8B2RUS7 1588 aa23.36■■□□□ 1.33
Rara-201ENSMUST00000068133 Rhox8Q6VSS7 320 aa22.52■■□□□ 1.19
Rara-201ENSMUST00000068133 ScribQ80U72 1612 aa22.34■■□□□ 1.17
Rara-201ENSMUST00000068133 Rtl1Q7M732 1744 aa22.12■■□□□ 1.13
Rara-201ENSMUST00000068133 Dcaf1Q80TR8 1506 aa21.78■■□□□ 1.08
Rara-201ENSMUST00000068133 Ccdc180J3QNE4 1664 aa21.67■■□□□ 1.06
Rara-201ENSMUST00000068133 Rb1cc1Q9ESK9 1588 aa21.48■■□□□ 1.03
Rara-201ENSMUST00000068133 NacadQ5SWP3 1504 aa21.42■■□□□ 1.02
Rara-201ENSMUST00000068133 Kdm5dQ62240 1548 aa21.41■■□□□ 1.02
Rara-201ENSMUST00000068133 Zcchc6Q5BLK4 1491 aaKnown RBP21.38■■□□□ 1.01
Rara-201ENSMUST00000068133 Baz1aO88379 1555 aa21.24■□□□□ 0.99
Rara-201ENSMUST00000068133 Sycp2Q9CUU3 1500 aa21.06■□□□□ 0.96
Rara-201ENSMUST00000068133 Ccdc136Q3TVA9 1136 aa20.91■□□□□ 0.94
Rara-201ENSMUST00000068133 Crybg2B7ZCC2 1516 aa20.91■□□□□ 0.94
Rara-201ENSMUST00000068133 BicraF8VPZ9 1578 aa20.85■□□□□ 0.93
Rara-201ENSMUST00000068133 Smarca2Q6DIC0 1577 aa20.75■□□□□ 0.91
Rara-201ENSMUST00000068133 Ube2uB1AUC4 352 aa20.7■□□□□ 0.9
Rara-201ENSMUST00000068133 HrcG5E8J6 738 aa20.69■□□□□ 0.9
Rara-201ENSMUST00000068133 Trim41Q5NCC3 630 aa20.52■□□□□ 0.88
Rara-201ENSMUST00000068133 Cecr2E9Q2Z1 1453 aa20.28■□□□□ 0.84
Rara-201ENSMUST00000068133 Thoc2B1AZI6 1594 aaKnown RBP20.25■□□□□ 0.83
Rara-201ENSMUST00000068133 Brd4Q9ESU6 1400 aaKnown RBP20.24■□□□□ 0.83
Rara-201ENSMUST00000068133 Cep164Q5DU05 1446 aa20.13■□□□□ 0.81
Rara-201ENSMUST00000068133 Synj1Q8CHC4 1574 aa20.08■□□□□ 0.81
Rara-201ENSMUST00000068133 Rpgrip1Q9EPQ2 1331 aa20.07■□□□□ 0.8
Rara-201ENSMUST00000068133 Ehmt2Q9Z148 1263 aaKnown RBP20.04■□□□□ 0.8
Rara-201ENSMUST00000068133 Cngb1E1AZ71 1325 aa20.01■□□□□ 0.79
Rara-201ENSMUST00000068133 CftrP26361 1476 aa19.99■□□□□ 0.79
Rara-201ENSMUST00000068133 Golga3P55937 1487 aa19.98■□□□□ 0.79
Rara-201ENSMUST00000068133 Pds5bQ4VA53 1446 aaKnown RBP19.96■□□□□ 0.79
Rara-201ENSMUST00000068133 Rsf1E9PWW9 1441 aaKnown RBP19.94■□□□□ 0.78
Rara-201ENSMUST00000068133 Acin1Q9JIX8 1338 aaKnown RBP19.9■□□□□ 0.78
Rara-201ENSMUST00000068133 Chic1Q8CBW7 227 aa19.9■□□□□ 0.78
Rara-201ENSMUST00000068133 Cttnbp2B9EJA2 1648 aa19.88■□□□□ 0.77
Rara-201ENSMUST00000068133 Baz1bQ9Z277 1479 aa19.88■□□□□ 0.77
Rara-201ENSMUST00000068133 Smarca4Q3TKT4 1613 aaKnown RBP19.87■□□□□ 0.77
Rara-201ENSMUST00000068133 Atad2bE9Q166 1460 aaKnown RBP19.84■□□□□ 0.77
Rara-201ENSMUST00000068133 Ccdc88bQ4QRL3 1481 aa19.83■□□□□ 0.77
Rara-201ENSMUST00000068133 Esf1Q3V1V3 845 aaKnown RBP19.81■□□□□ 0.76
Rara-201ENSMUST00000068133 Top2bQ64511 1612 aa19.78■□□□□ 0.76
Rara-201ENSMUST00000068133 Fam135aQ6NS59 1506 aa19.73■□□□□ 0.75
Rara-201ENSMUST00000068133 Gab3Q8BSM5 595 aa19.67■□□□□ 0.74
Rara-201ENSMUST00000068133 Iqgap2Q3UQ44 1575 aa19.62■□□□□ 0.73
Rara-201ENSMUST00000068133 Wdr62Q3U3T8 1523 aa19.58■□□□□ 0.72
Rara-201ENSMUST00000068133 Cc2d2aQ8CFW7 1633 aa19.57■□□□□ 0.72
Rara-201ENSMUST00000068133 Unc13aQ4KUS2 1712 aa19.56■□□□□ 0.72
Rara-201ENSMUST00000068133 Fmn1Q05860 1466 aa19.49■□□□□ 0.71
Rara-201ENSMUST00000068133 Ercc6F8VPZ5 1481 aa19.38■□□□□ 0.69
Rara-201ENSMUST00000068133 Top2aQ01320 1528 aaKnown RBP19.38■□□□□ 0.69
Rara-201ENSMUST00000068133 Frmpd1A2AKB4 1549 aa19.36■□□□□ 0.69
Rara-201ENSMUST00000068133 Dnajc5bQ9CQ94 199 aa19.33■□□□□ 0.69
Rara-201ENSMUST00000068133 Rapgef2Q8CHG7 1496 aa19.32■□□□□ 0.68
Rara-201ENSMUST00000068133 TnnQ80Z71 1560 aa19.21■□□□□ 0.67
Rara-201ENSMUST00000068133 Cep162Q6ZQ06 1403 aa19.15■□□□□ 0.66
Rara-201ENSMUST00000068133 Mapk8ip2Q9ERE9 830 aa19.12■□□□□ 0.65
Rara-201ENSMUST00000068133 Lamc3Q9R0B6 1581 aa19.09■□□□□ 0.65
Rara-201ENSMUST00000068133 Phldb1Q6PDH0 1371 aaKnown RBP19.06■□□□□ 0.64
Rara-201ENSMUST00000068133 Npm2Q80W85 207 aa19.04■□□□□ 0.64
Rara-201ENSMUST00000068133 Kcna4Q61423 654 aa19.03■□□□□ 0.64
Rara-201ENSMUST00000068133 Eif4g1Q6NZJ6 1600 aaKnown RBP19.02■□□□□ 0.64
Rara-201ENSMUST00000068133 Myt1lP97500 1187 aa19.01■□□□□ 0.63
Rara-201ENSMUST00000068133 Mier1Q5UAK0 511 aa19.01■□□□□ 0.63
Rara-201ENSMUST00000068133 Kif15Q6P9L6 1387 aa19■□□□□ 0.63
Rara-201ENSMUST00000068133 Ppargc1bQ8VHJ7 1014 aa18.99■□□□□ 0.63
Rara-201ENSMUST00000068133 Pcgf6Q99NA9 353 aa18.91■□□□□ 0.62
Rara-201ENSMUST00000068133 Camsap1A2AHC3 1581 aa18.91■□□□□ 0.62
Rara-201ENSMUST00000068133 PtprkP35822 1457 aa18.9■□□□□ 0.62
Rara-201ENSMUST00000068133 NefmP08553 848 aa18.9■□□□□ 0.62
Rara-201ENSMUST00000068133 NrkQ9R0G8 1455 aa18.89■□□□□ 0.62
Rara-201ENSMUST00000068133 Arhgap35Q91YM2 1499 aa18.88■□□□□ 0.61
Rara-201ENSMUST00000068133 Il27Q8K3I6 234 aa18.88■□□□□ 0.61
Rara-201ENSMUST00000068133 UbtfP25976 765 aaKnown RBP18.85■□□□□ 0.61
Rara-201ENSMUST00000068133 Mrc2Q64449 1479 aa18.84■□□□□ 0.61
Rara-201ENSMUST00000068133 Clip1Q922J3 1391 aa18.83■□□□□ 0.6
Rara-201ENSMUST00000068133 Shroom4Q1W617 1475 aa18.83■□□□□ 0.6
Rara-201ENSMUST00000068133 Ccdc18Q640L5 1455 aa18.82■□□□□ 0.6
Rara-201ENSMUST00000068133 Grin2bQ01097 1482 aa18.77■□□□□ 0.6
Rara-201ENSMUST00000068133 Map3k1P53349 1493 aa18.73■□□□□ 0.59
Rara-201ENSMUST00000068133 Supt5hO55201 1082 aaKnown RBP18.71■□□□□ 0.59
Rara-201ENSMUST00000068133 Cux2P70298 1426 aa18.71■□□□□ 0.59
Rara-201ENSMUST00000068133 Ubl4bQ9CQ84 188 aa18.7■□□□□ 0.58
Rara-201ENSMUST00000068133 Eea1Q8BL66 1411 aa18.69■□□□□ 0.58
Rara-201ENSMUST00000068133 Plekhg3Q4VAC9 1341 aa18.68■□□□□ 0.58
Rara-201ENSMUST00000068133 Ttbk1Q6PCN3 1308 aa18.67■□□□□ 0.58
Rara-201ENSMUST00000068133 Zeb1Q64318 1117 aa18.67■□□□□ 0.58
Rara-201ENSMUST00000068133 Mroh2bQ7M6Y6 1581 aa18.65■□□□□ 0.58
Rara-201ENSMUST00000068133 Arap1Q4LDD4 1452 aa18.64■□□□□ 0.57
Rara-201ENSMUST00000068133 Lrriq1Q0P5X1 1673 aa18.64■□□□□ 0.57
Rara-201ENSMUST00000068133 Npm1Q61937 292 aaKnown RBP18.62■□□□□ 0.57
Rara-201ENSMUST00000068133 Setd5Q5XJV7 1441 aa18.6■□□□□ 0.57
Rara-201ENSMUST00000068133 DiexfQ8BTT6 772 aaKnown RBP18.59■□□□□ 0.57
Rara-201ENSMUST00000068133 Gpatch8A2A6A1 1505 aa18.59■□□□□ 0.57
Rara-201ENSMUST00000068133 Arhgef5E9Q7D5 1581 aa18.58■□□□□ 0.57
Rara-201ENSMUST00000068133 Kif21aQ9QXL2 1672 aa18.58■□□□□ 0.56
Rara-201ENSMUST00000068133 Efcab5A0JP43 1406 aa18.57■□□□□ 0.56
Rara-201ENSMUST00000068133 LrpprcQ6PB66 1392 aaKnown RBP18.57■□□□□ 0.56
Rara-201ENSMUST00000068133 AqrQ8CFQ3 1481 aaKnown RBP18.55■□□□□ 0.56
Retrieved 100 of 22,080 RNA–protein pairs in 458.3 ms