RNA–Protein interactions for RNA: ENSMUST00000065304.11

Rtn3-202, Transcript of Reticulon-3, mousemouse

TSL 1 (best) BASIC

Gene Rtn3, Length 5,030 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Rtn3-202ENSMUST00000065304 Plekhg3Q4VAC9 1341 aa14.67□□□□□ -0.06
Rtn3-202ENSMUST00000065304 Ppm1gQ61074 542 aa14.67□□□□□ -0.06
Rtn3-202ENSMUST00000065304 Npm1Q61937 292 aaKnown RBP14.67□□□□□ -0.06
Rtn3-202ENSMUST00000065304 Gm973E9Q295 1059 aa14.65□□□□□ -0.06
Rtn3-202ENSMUST00000065304 Mak16Q8BGS0 296 aaKnown RBP14.65□□□□□ -0.06
Rtn3-202ENSMUST00000065304 Znf316Q6PGE4 1016 aa14.64□□□□□ -0.07
Rtn3-202ENSMUST00000065304 AU015836B2RUM3 263 aa14.63□□□□□ -0.07
Rtn3-202ENSMUST00000065304 Irx3P81067 507 aa14.62□□□□□ -0.07
Rtn3-202ENSMUST00000065304 Sall2Q9QX96 1004 aa14.62□□□□□ -0.07
Rtn3-202ENSMUST00000065304 Chmp4bQ9D8B3 224 aaKnown RBP14.6□□□□□ -0.07
Rtn3-202ENSMUST00000065304 Rtl1Q7M732 1744 aa14.59□□□□□ -0.07
Rtn3-202ENSMUST00000065304 SetQ9EQU5 289 aaKnown RBP14.59□□□□□ -0.07
Rtn3-202ENSMUST00000065304 Eid3Q3V124 375 aa14.58□□□□□ -0.08
Rtn3-202ENSMUST00000065304 Clstn2Q9ER65 966 aa14.57□□□□□ -0.08
Rtn3-202ENSMUST00000065304 MsnP26041 577 aaKnown RBP14.57□□□□□ -0.08
Rtn3-202ENSMUST00000065304 Pes1Q9EQ61 584 aaKnown RBP14.54□□□□□ -0.08
Rtn3-202ENSMUST00000065304 Ifnlr1Q8CGK5 535 aa14.54□□□□□ -0.08
Rtn3-202ENSMUST00000065304 PtmsQ9D0J8 101 aaKnown RBP14.53□□□□□ -0.08
Rtn3-202ENSMUST00000065304 Map7O88735 730 aa14.52□□□□□ -0.08
Rtn3-202ENSMUST00000065304 Abcc9P70170 1546 aa14.52□□□□□ -0.08
Rtn3-202ENSMUST00000065304 Wwc2Q6NXJ0 1187 aa14.52□□□□□ -0.09
Rtn3-202ENSMUST00000065304 NischQ80TM9 1593 aa14.51□□□□□ -0.09
Rtn3-202ENSMUST00000065304 Zcchc6Q5BLK4 1491 aaKnown RBP14.5□□□□□ -0.09
Rtn3-202ENSMUST00000065304 Arid4bA2CG63 1314 aaKnown RBP14.49□□□□□ -0.09
Rtn3-202ENSMUST00000065304 Map7d2A2AG50 781 aa14.49□□□□□ -0.09
Rtn3-202ENSMUST00000065304 Zfp777B9EKF4 885 aa14.48□□□□□ -0.09
Rtn3-202ENSMUST00000065304 Trim26Q99PN3 545 aa14.44□□□□□ -0.1
Rtn3-202ENSMUST00000065304 MccE9PWI3 1003 aa14.41□□□□□ -0.1
Rtn3-202ENSMUST00000065304 Fam71e1A1L3C1 212 aa14.41□□□□□ -0.1
Rtn3-202ENSMUST00000065304 Ofd1Q80Z25 1017 aa14.41□□□□□ -0.1
Rtn3-202ENSMUST00000065304 Erich6bQ9D4S6 220 aa14.41□□□□□ -0.1
Rtn3-202ENSMUST00000065304 Bcl11aQ9QYE3 773 aa14.4□□□□□ -0.1
Rtn3-202ENSMUST00000065304 Clip1Q922J3 1391 aa14.38□□□□□ -0.11
Rtn3-202ENSMUST00000065304 KnstrnQ9D9Z1 312 aaKnown RBP14.38□□□□□ -0.11
Rtn3-202ENSMUST00000065304 Dnttip2Q8R2M2 758 aaKnown RBP14.37□□□□□ -0.11
Rtn3-202ENSMUST00000065304 RdxP26043 583 aaKnown RBP14.37□□□□□ -0.11
Rtn3-202ENSMUST00000065304 Gm6268A2A3U9 297 aa14.36□□□□□ -0.11
Rtn3-202ENSMUST00000065304 Dnai2A2AC93 623 aa14.36□□□□□ -0.11
Rtn3-202ENSMUST00000065304 Anapc15P60007 132 aa14.36□□□□□ -0.11
Rtn3-202ENSMUST00000065304 Hsp90b1P08113 802 aaKnown RBP14.35□□□□□ -0.11
Rtn3-202ENSMUST00000065304 NudcO35685 332 aaKnown RBP14.35□□□□□ -0.11
Rtn3-202ENSMUST00000065304 Pde3bQ61409 1100 aa14.35□□□□□ -0.11
Rtn3-202ENSMUST00000065304 Rrp12Q6P5B0 1295 aaKnown RBP14.35□□□□□ -0.11
Rtn3-202ENSMUST00000065304 Ftsj3Q9DBE9 838 aaKnown RBP14.35□□□□□ -0.11
Rtn3-202ENSMUST00000065304 Mapk8ip3Q9ESN9 1337 aa14.33□□□□□ -0.11
Rtn3-202ENSMUST00000065304 Mbd3Q9Z2D8 285 aaKnown RBP14.33□□□□□ -0.12
Rtn3-202ENSMUST00000065304 Iqcf3Q9D498 203 aa14.32□□□□□ -0.12
Rtn3-202ENSMUST00000065304 Tpm3-rs7D3Z2H9 248 aa14.32□□□□□ -0.12
Rtn3-202ENSMUST00000065304 Fkbp15Q6P9Q6 1216 aaKnown RBP14.32□□□□□ -0.12
Rtn3-202ENSMUST00000065304 Becn1O88597 448 aa14.3□□□□□ -0.12
Rtn3-202ENSMUST00000065304 Cald1E9QA15 768 aaKnown RBP14.3□□□□□ -0.12
Rtn3-202ENSMUST00000065304 Eif4g2Q62448 906 aaKnown RBP14.3□□□□□ -0.12
Rtn3-202ENSMUST00000065304 Kiaa0754Q69ZZ9 979 aa14.29□□□□□ -0.12
Rtn3-202ENSMUST00000065304 Spryd3E9Q9B3 442 aa14.29□□□□□ -0.12
Rtn3-202ENSMUST00000065304 1700123L14RikQ3V2K7 440 aa14.29□□□□□ -0.12
Rtn3-202ENSMUST00000065304 HnrnpuQ8VEK3 800 aaKnown RBP14.29□□□□□ -0.12
Rtn3-202ENSMUST00000065304 BccipQ9CWI3 316 aa14.29□□□□□ -0.12
Rtn3-202ENSMUST00000065304 Irx6Q9ER75 438 aa14.29□□□□□ -0.12
Rtn3-202ENSMUST00000065304 Safb2Q80YR5 991 aaKnown RBP14.29□□□□□ -0.12
Rtn3-202ENSMUST00000065304 Ddrgk1Q80WW9 315 aa14.28□□□□□ -0.12
Rtn3-202ENSMUST00000065304 Sh3bp5Q9Z131 463 aa14.28□□□□□ -0.12
Rtn3-202ENSMUST00000065304 IqubQ8CDK3 788 aa14.27□□□□□ -0.12
Rtn3-202ENSMUST00000065304 Noc3lQ8VI84 807 aaKnown RBP14.27□□□□□ -0.13
Rtn3-202ENSMUST00000065304 Tpm3P21107 285 aaKnown RBP14.26□□□□□ -0.13
Rtn3-202ENSMUST00000065304 Clstn1Q9EPL2 979 aa14.26□□□□□ -0.13
Rtn3-202ENSMUST00000065304 R3hcc1Q8BSI6 488 aa14.25□□□□□ -0.13
Rtn3-202ENSMUST00000065304 Cspp1B2RX88 1205 aa14.23□□□□□ -0.13
Rtn3-202ENSMUST00000065304 Pcmtd1P59913 357 aa14.23□□□□□ -0.13
Rtn3-202ENSMUST00000065304 4933402E13RikQ9D4D2 429 aa14.22□□□□□ -0.13
Rtn3-202ENSMUST00000065304 Plppr3Q7TPB0 716 aa14.21□□□□□ -0.13
Rtn3-202ENSMUST00000065304 Trim30aP15533 496 aa14.21□□□□□ -0.13
Rtn3-202ENSMUST00000065304 Dusp9Q7TNL7 452 aa14.21□□□□□ -0.13
Rtn3-202ENSMUST00000065304 Cwc22Q8C5N3 908 aaKnown RBP14.2□□□□□ -0.14
Rtn3-202ENSMUST00000065304 Rtn4Q99P72 1162 aaKnown RBP14.2□□□□□ -0.14
Rtn3-202ENSMUST00000065304 Podxl2Q8CAE9 603 aa14.2□□□□□ -0.14
Rtn3-202ENSMUST00000065304 Apbb1Q9QXJ1 710 aa14.19□□□□□ -0.14
Rtn3-202ENSMUST00000065304 Dnai1Q8C0M8 701 aa14.19□□□□□ -0.14
Rtn3-202ENSMUST00000065304 Rassf8Q8CJ96 419 aa14.19□□□□□ -0.14
Rtn3-202ENSMUST00000065304 Iffo2Q8R2V2 512 aa14.18□□□□□ -0.14
Rtn3-202ENSMUST00000065304 Slc4a1apE9PX68 744 aa14.18□□□□□ -0.14
Rtn3-202ENSMUST00000065304 VgfQ0VGU4 617 aa14.18□□□□□ -0.14
Rtn3-202ENSMUST00000065304 P3h3Q8CG70 732 aa14.18□□□□□ -0.14
Rtn3-202ENSMUST00000065304 Tcerg1Q8CGF7 1100 aaKnown RBP14.18□□□□□ -0.14
Rtn3-202ENSMUST00000065304 Sart3Q9JLI8 962 aaKnown RBP14.18□□□□□ -0.14
Rtn3-202ENSMUST00000065304 Chic2Q9D9G3 165 aa14.17□□□□□ -0.14
Rtn3-202ENSMUST00000065304 Exosc9Q9JHI7 438 aaKnown RBP14.17□□□□□ -0.14
Rtn3-202ENSMUST00000065304 Prm3Q62100 101 aa14.14□□□□□ -0.15
Rtn3-202ENSMUST00000065304 Neurod2Q62414 383 aa14.14□□□□□ -0.15
Rtn3-202ENSMUST00000065304 Dbr1Q923B1 550 aa14.14□□□□□ -0.15
Rtn3-202ENSMUST00000065304 CalrP14211 416 aaKnown RBP14.13□□□□□ -0.15
Rtn3-202ENSMUST00000065304 Rgl3Q3UYI5 709 aa14.13□□□□□ -0.15
Rtn3-202ENSMUST00000065304 Rwdd1Q9CQK7 243 aa14.13□□□□□ -0.15
Rtn3-202ENSMUST00000065304 CgnP59242 1191 aa14.12□□□□□ -0.15
Rtn3-202ENSMUST00000065304 Ccdc34Q3UI66 367 aa14.12□□□□□ -0.15
Rtn3-202ENSMUST00000065304 Srpk2O54781 681 aaKnown RBP14.12□□□□□ -0.15
Rtn3-202ENSMUST00000065304 Smarce1O54941 411 aaKnown RBP14.11□□□□□ -0.15
Rtn3-202ENSMUST00000065304 Chmp5Q9D7S9 219 aa14.11□□□□□ -0.15
Rtn3-202ENSMUST00000065304 Atp6v1dP57746 247 aa14.09□□□□□ -0.15
Rtn3-202ENSMUST00000065304 B4galnt3Q6L8S8 986 aa14.09□□□□□ -0.15
Rtn3-202ENSMUST00000065304 Ush1cQ9ES64 910 aa14.09□□□□□ -0.15
Retrieved 100 of 22,080 RNA–protein pairs in 28.9 ms