RNA–Protein interactions for RNA: ENSMUST00000055506.8

Gtf3c1-201, Transcript of General transcription factor 3C polypeptide 1, mousemouse

APPRIS P2 TSL 1 (best) BASIC

Gene Gtf3c1, Length 6,961 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Gtf3c1-201ENSMUST00000055506 Taok2Q6ZQ29 1240 aa14.85□□□□□ -0.03
Gtf3c1-201ENSMUST00000055506 Hsp90ab1P11499 724 aaKnown RBP14.85□□□□□ -0.03
Gtf3c1-201ENSMUST00000055506 SafbD3YXK2 937 aaKnown RBP14.84□□□□□ -0.03
Gtf3c1-201ENSMUST00000055506 Trim30dE9PWL0 497 aa14.84□□□□□ -0.03
Gtf3c1-201ENSMUST00000055506 PtmaP26350 111 aa14.84□□□□□ -0.03
Gtf3c1-201ENSMUST00000055506 Zcchc6Q5BLK4 1491 aaKnown RBP14.82□□□□□ -0.04
Gtf3c1-201ENSMUST00000055506 Plcb2A3KGF7 1181 aa14.8□□□□□ -0.04
Gtf3c1-201ENSMUST00000055506 Ccdc9Q8VC31 543 aaKnown RBP14.76□□□□□ -0.05
Gtf3c1-201ENSMUST00000055506 Apbb1Q9QXJ1 710 aa14.76□□□□□ -0.05
Gtf3c1-201ENSMUST00000055506 Aebp2Q9Z248 504 aaKnown RBP14.75□□□□□ -0.05
Gtf3c1-201ENSMUST00000055506 Dbr1Q923B1 550 aa14.74□□□□□ -0.05
Gtf3c1-201ENSMUST00000055506 Fkbp15Q6P9Q6 1216 aaKnown RBP14.73□□□□□ -0.05
Gtf3c1-201ENSMUST00000055506 Gm13695A2AK44 830 aa14.73□□□□□ -0.05
Gtf3c1-201ENSMUST00000055506 Slc4a3P16283 1227 aa14.72□□□□□ -0.05
Gtf3c1-201ENSMUST00000055506 Irx6Q9ER75 438 aa14.72□□□□□ -0.05
Gtf3c1-201ENSMUST00000055506 Ccdc27Q3V036 639 aa14.72□□□□□ -0.05
Gtf3c1-201ENSMUST00000055506 Fgd1P52734 960 aa14.68□□□□□ -0.06
Gtf3c1-201ENSMUST00000055506 Armcx1Q9CX83 456 aa14.66□□□□□ -0.06
Gtf3c1-201ENSMUST00000055506 Irx3P81067 507 aa14.66□□□□□ -0.06
Gtf3c1-201ENSMUST00000055506 Chic2Q9D9G3 165 aa14.65□□□□□ -0.06
Gtf3c1-201ENSMUST00000055506 Tnnt2P50752 301 aa14.64□□□□□ -0.07
Gtf3c1-201ENSMUST00000055506 B4galnt3Q6L8S8 986 aa14.62□□□□□ -0.07
Gtf3c1-201ENSMUST00000055506 Podxl2Q8CAE9 603 aa14.58□□□□□ -0.08
Gtf3c1-201ENSMUST00000055506 Ofd1Q80Z25 1017 aa14.57□□□□□ -0.08
Gtf3c1-201ENSMUST00000055506 Dnttip2Q8R2M2 758 aaKnown RBP14.56□□□□□ -0.08
Gtf3c1-201ENSMUST00000055506 Erich6bQ9D4S6 220 aa14.55□□□□□ -0.08
Gtf3c1-201ENSMUST00000055506 IbspQ61711 324 aa14.54□□□□□ -0.08
Gtf3c1-201ENSMUST00000055506 Neurod2Q62414 383 aa14.53□□□□□ -0.08
Gtf3c1-201ENSMUST00000055506 Clip1Q922J3 1391 aa14.53□□□□□ -0.08
Gtf3c1-201ENSMUST00000055506 Htatsf1Q8BGC0 757 aa14.53□□□□□ -0.08
Gtf3c1-201ENSMUST00000055506 Npm1Q61937 292 aaKnown RBP14.51□□□□□ -0.09
Gtf3c1-201ENSMUST00000055506 Clstn1Q9EPL2 979 aa14.51□□□□□ -0.09
Gtf3c1-201ENSMUST00000055506 Ecm2Q5FW85 670 aa14.51□□□□□ -0.09
Gtf3c1-201ENSMUST00000055506 Rtn4Q99P72 1162 aaKnown RBP14.46□□□□□ -0.1
Gtf3c1-201ENSMUST00000055506 PrkcshO08795 521 aa14.45□□□□□ -0.1
Gtf3c1-201ENSMUST00000055506 AU015836B2RUM3 263 aa14.45□□□□□ -0.1
Gtf3c1-201ENSMUST00000055506 Casc1Q6TDU8 730 aa14.42□□□□□ -0.1
Gtf3c1-201ENSMUST00000055506 Rgl3Q3UYI5 709 aa14.41□□□□□ -0.1
Gtf3c1-201ENSMUST00000055506 Pcmtd1P59913 357 aa14.4□□□□□ -0.1
Gtf3c1-201ENSMUST00000055506 Znf326O88291 580 aa14.39□□□□□ -0.11
Gtf3c1-201ENSMUST00000055506 Ppm1gQ61074 542 aa14.39□□□□□ -0.11
Gtf3c1-201ENSMUST00000055506 Ubap1lG3UW59 384 aa14.39□□□□□ -0.11
Gtf3c1-201ENSMUST00000055506 PnnO35691 725 aaKnown RBP14.37□□□□□ -0.11
Gtf3c1-201ENSMUST00000055506 Gm6268A2A3U9 297 aa14.35□□□□□ -0.11
Gtf3c1-201ENSMUST00000055506 Gpatch11Q3UFS4 262 aa14.35□□□□□ -0.11
Gtf3c1-201ENSMUST00000055506 Dcaf1Q80TR8 1506 aa14.35□□□□□ -0.11
Gtf3c1-201ENSMUST00000055506 Mak16Q8BGS0 296 aaKnown RBP14.35□□□□□ -0.11
Gtf3c1-201ENSMUST00000055506 Grwd1Q810D6 446 aaKnown RBP14.35□□□□□ -0.11
Gtf3c1-201ENSMUST00000055506 MsnP26041 577 aaKnown RBP14.34□□□□□ -0.11
Gtf3c1-201ENSMUST00000055506 Samd1D3YXK1 519 aa14.33□□□□□ -0.11
Gtf3c1-201ENSMUST00000055506 1700019A02RikA0A087WPV9 146 aa14.33□□□□□ -0.12
Gtf3c1-201ENSMUST00000055506 Adam1bQ8R534 806 aa14.31□□□□□ -0.12
Gtf3c1-201ENSMUST00000055506 Supt16hQ920B9 1047 aa14.31□□□□□ -0.12
Gtf3c1-201ENSMUST00000055506 Kdm2aP59997 1161 aa14.29□□□□□ -0.12
Gtf3c1-201ENSMUST00000055506 Pknox2Q8BG99 474 aa14.28□□□□□ -0.12
Gtf3c1-201ENSMUST00000055506 Pes1Q9EQ61 584 aaKnown RBP14.28□□□□□ -0.12
Gtf3c1-201ENSMUST00000055506 Gtf3c3Q3TMP1 882 aa14.28□□□□□ -0.12
Gtf3c1-201ENSMUST00000055506 Ccer2J3QPU5 274 aa14.27□□□□□ -0.12
Gtf3c1-201ENSMUST00000055506 Ubl4bQ9CQ84 188 aa14.26□□□□□ -0.13
Gtf3c1-201ENSMUST00000055506 Kiaa0754Q69ZZ9 979 aa14.26□□□□□ -0.13
Gtf3c1-201ENSMUST00000055506 Hsp90b1P08113 802 aaKnown RBP14.26□□□□□ -0.13
Gtf3c1-201ENSMUST00000055506 Wwc2Q6NXJ0 1187 aa14.26□□□□□ -0.13
Gtf3c1-201ENSMUST00000055506 ChgaP26339 463 aaKnown RBP14.25□□□□□ -0.13
Gtf3c1-201ENSMUST00000055506 BlmO88700 1416 aa14.25□□□□□ -0.13
Gtf3c1-201ENSMUST00000055506 SlkO54988 1233 aa14.24□□□□□ -0.13
Gtf3c1-201ENSMUST00000055506 Hdac5Q9Z2V6 1113 aa14.23□□□□□ -0.13
Gtf3c1-201ENSMUST00000055506 Senp3Q9EP97 568 aaKnown RBP14.23□□□□□ -0.13
Gtf3c1-201ENSMUST00000055506 Mical1Q8VDP3 1048 aa14.22□□□□□ -0.13
Gtf3c1-201ENSMUST00000055506 Dnai1Q8C0M8 701 aa14.21□□□□□ -0.13
Gtf3c1-201ENSMUST00000055506 BccipQ9CWI3 316 aa14.19□□□□□ -0.14
Gtf3c1-201ENSMUST00000055506 Map7O88735 730 aa14.18□□□□□ -0.14
Gtf3c1-201ENSMUST00000055506 Sh3bp5Q9Z131 463 aa14.18□□□□□ -0.14
Gtf3c1-201ENSMUST00000055506 Rrp12Q6P5B0 1295 aaKnown RBP14.18□□□□□ -0.14
Gtf3c1-201ENSMUST00000055506 CgnP59242 1191 aa14.17□□□□□ -0.14
Gtf3c1-201ENSMUST00000055506 Ipo9Q91YE6 1041 aa14.17□□□□□ -0.14
Gtf3c1-201ENSMUST00000055506 Nolc1E9Q5C9 702 aaKnown RBP14.16□□□□□ -0.14
Gtf3c1-201ENSMUST00000055506 Cnga1P29974 684 aa14.16□□□□□ -0.14
Gtf3c1-201ENSMUST00000055506 Anapc15P60007 132 aa14.16□□□□□ -0.14
Gtf3c1-201ENSMUST00000055506 NgefQ8CHT1 710 aa14.16□□□□□ -0.14
Gtf3c1-201ENSMUST00000055506 Safb2Q80YR5 991 aaKnown RBP14.15□□□□□ -0.14
Gtf3c1-201ENSMUST00000055506 Plin1Q8CGN5 517 aa14.15□□□□□ -0.14
Gtf3c1-201ENSMUST00000055506 Chmp5Q9D7S9 219 aa14.14□□□□□ -0.15
Gtf3c1-201ENSMUST00000055506 Tcerg1Q8CGF7 1100 aaKnown RBP14.14□□□□□ -0.15
Gtf3c1-201ENSMUST00000055506 Calcoco2A2A6M5 331 aa14.14□□□□□ -0.15
Gtf3c1-201ENSMUST00000055506 Arid4aF8VPQ2 1261 aaKnown RBP14.14□□□□□ -0.15
Gtf3c1-201ENSMUST00000055506 Card11Q8CIS0 1159 aa14.14□□□□□ -0.15
Gtf3c1-201ENSMUST00000055506 Cluap1Q8R3P7 413 aa14.13□□□□□ -0.15
Gtf3c1-201ENSMUST00000055506 Plcd4Q8K3R3 807 aa14.13□□□□□ -0.15
Gtf3c1-201ENSMUST00000055506 Mapk8ip3Q9ESN9 1337 aa14.13□□□□□ -0.15
Gtf3c1-201ENSMUST00000055506 Fbxo2Q80UW2 297 aa14.12□□□□□ -0.15
Gtf3c1-201ENSMUST00000055506 Tomm22Q9CPQ3 142 aa14.12□□□□□ -0.15
Gtf3c1-201ENSMUST00000055506 Mfap1aC0HKD8 439 aaKnown RBP14.12□□□□□ -0.15
Gtf3c1-201ENSMUST00000055506 Mfap1bC0HKD9 439 aaKnown RBP14.12□□□□□ -0.15
Gtf3c1-201ENSMUST00000055506 GorabQ8BRM2 368 aa14.11□□□□□ -0.15
Gtf3c1-201ENSMUST00000055506 Rassf8Q8CJ96 419 aa14.11□□□□□ -0.15
Gtf3c1-201ENSMUST00000055506 SetQ9EQU5 289 aaKnown RBP14.1□□□□□ -0.15
Gtf3c1-201ENSMUST00000055506 CrebrfQ8CDG5 640 aaKnown RBP14.1□□□□□ -0.15
Gtf3c1-201ENSMUST00000055506 Exosc9Q9JHI7 438 aaKnown RBP14.1□□□□□ -0.15
Gtf3c1-201ENSMUST00000055506 Znf330Q922H9 316 aa14.09□□□□□ -0.15
Gtf3c1-201ENSMUST00000055506 Cep164Q5DU05 1446 aa14.09□□□□□ -0.15
Retrieved 100 of 22,080 RNA–protein pairs in 7.1 ms