RNA–Protein interactions for RNA: ENSMUST00000050078.12

Sdf4-201, Transcript of 45 kDa calcium-binding protein, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Sdf4, Length 5,177 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Sdf4-201ENSMUST00000050078 Gm13697A2AK42 830 aa16.9■□□□□ 0.3
Sdf4-201ENSMUST00000050078 P3h3Q8CG70 732 aa16.85■□□□□ 0.29
Sdf4-201ENSMUST00000050078 Rangap1P46061 589 aaKnown RBP16.84■□□□□ 0.29
Sdf4-201ENSMUST00000050078 Fam71e1A1L3C1 212 aa16.83■□□□□ 0.28
Sdf4-201ENSMUST00000050078 Rgl3Q3UYI5 709 aa16.82■□□□□ 0.28
Sdf4-201ENSMUST00000050078 Kif15Q6P9L6 1387 aa16.78■□□□□ 0.28
Sdf4-201ENSMUST00000050078 Eea1Q8BL66 1411 aa16.78■□□□□ 0.28
Sdf4-201ENSMUST00000050078 Ccdc88bQ4QRL3 1481 aa16.77■□□□□ 0.27
Sdf4-201ENSMUST00000050078 SafbD3YXK2 937 aaKnown RBP16.75■□□□□ 0.27
Sdf4-201ENSMUST00000050078 Upf2A2AT37 1269 aaKnown RBP16.72■□□□□ 0.27
Sdf4-201ENSMUST00000050078 Kdm5dQ62240 1548 aa16.72■□□□□ 0.27
Sdf4-201ENSMUST00000050078 Grwd1Q810D6 446 aaKnown RBP16.7■□□□□ 0.26
Sdf4-201ENSMUST00000050078 Hdac5Q9Z2V6 1113 aa16.69■□□□□ 0.26
Sdf4-201ENSMUST00000050078 Ofd1Q80Z25 1017 aa16.68■□□□□ 0.26
Sdf4-201ENSMUST00000050078 Gm13695A2AK44 830 aa16.67■□□□□ 0.26
Sdf4-201ENSMUST00000050078 Hspa5P20029 655 aaKnown RBP16.67■□□□□ 0.26
Sdf4-201ENSMUST00000050078 Clstn2Q9ER65 966 aa16.64■□□□□ 0.25
Sdf4-201ENSMUST00000050078 Plppr3Q7TPB0 716 aa16.6■□□□□ 0.25
Sdf4-201ENSMUST00000050078 Trim26Q99PN3 545 aa16.59■□□□□ 0.25
Sdf4-201ENSMUST00000050078 Wwc2Q6NXJ0 1187 aa16.57■□□□□ 0.24
Sdf4-201ENSMUST00000050078 Kdm2aP59997 1161 aa16.56■□□□□ 0.24
Sdf4-201ENSMUST00000050078 Cep162Q6ZQ06 1403 aa16.56■□□□□ 0.24
Sdf4-201ENSMUST00000050078 CanxP35564 591 aaKnown RBP16.55■□□□□ 0.24
Sdf4-201ENSMUST00000050078 Card11Q8CIS0 1159 aa16.55■□□□□ 0.24
Sdf4-201ENSMUST00000050078 Apbb1Q9QXJ1 710 aa16.54■□□□□ 0.24
Sdf4-201ENSMUST00000050078 Sin3aQ60520 1274 aaKnown RBP16.53■□□□□ 0.24
Sdf4-201ENSMUST00000050078 Trim30dE9PWL0 497 aa16.52■□□□□ 0.24
Sdf4-201ENSMUST00000050078 Ccdc18Q640L5 1455 aa16.52■□□□□ 0.23
Sdf4-201ENSMUST00000050078 Arhgap27A2AB59 869 aa16.51■□□□□ 0.23
Sdf4-201ENSMUST00000050078 Hsp90aa1P07901 733 aaKnown RBP16.5■□□□□ 0.23
Sdf4-201ENSMUST00000050078 Slc4a3P16283 1227 aa16.49■□□□□ 0.23
Sdf4-201ENSMUST00000050078 Mroh3A0A1D5RM54 893 aa16.46■□□□□ 0.23
Sdf4-201ENSMUST00000050078 Cwc22Q8C5N3 908 aaKnown RBP16.46■□□□□ 0.22
Sdf4-201ENSMUST00000050078 Neurod2Q62414 383 aa16.45■□□□□ 0.22
Sdf4-201ENSMUST00000050078 Vsig10D3YX43 558 aa16.44■□□□□ 0.22
Sdf4-201ENSMUST00000050078 Mia2Q91ZV0 1396 aa16.44■□□□□ 0.22
Sdf4-201ENSMUST00000050078 Hsp90ab1P11499 724 aaKnown RBP16.43■□□□□ 0.22
Sdf4-201ENSMUST00000050078 Rrp7aQ9D1C9 280 aaKnown RBP16.43■□□□□ 0.22
Sdf4-201ENSMUST00000050078 Mtus2Q3UHD3 1353 aa16.41■□□□□ 0.22
Sdf4-201ENSMUST00000050078 Dbr1Q923B1 550 aa16.4■□□□□ 0.22
Sdf4-201ENSMUST00000050078 DekQ7TNV0 380 aaKnown RBP16.4■□□□□ 0.22
Sdf4-201ENSMUST00000050078 Pkd2O35245 966 aa16.39■□□□□ 0.21
Sdf4-201ENSMUST00000050078 Arid4bA2CG63 1314 aaKnown RBP16.38■□□□□ 0.21
Sdf4-201ENSMUST00000050078 Fmn1Q05860 1466 aa16.38■□□□□ 0.21
Sdf4-201ENSMUST00000050078 Aebp1Q640N1 1128 aa16.36■□□□□ 0.21
Sdf4-201ENSMUST00000050078 B4galnt3Q6L8S8 986 aa16.36■□□□□ 0.21
Sdf4-201ENSMUST00000050078 Ercc6F8VPZ5 1481 aa16.36■□□□□ 0.21
Sdf4-201ENSMUST00000050078 Gm20521D3Z5F7 333 aa16.35■□□□□ 0.21
Sdf4-201ENSMUST00000050078 Exoc6Q8R313 802 aa16.35■□□□□ 0.21
Sdf4-201ENSMUST00000050078 Ccdc27Q3V036 639 aa16.34■□□□□ 0.21
Sdf4-201ENSMUST00000050078 Srpk2O54781 681 aaKnown RBP16.33■□□□□ 0.21
Sdf4-201ENSMUST00000050078 Cecr2E9Q2Z1 1453 aa16.33■□□□□ 0.21
Sdf4-201ENSMUST00000050078 Fgd1P52734 960 aa16.33■□□□□ 0.2
Sdf4-201ENSMUST00000050078 Rundc1Q0VDN7 615 aa16.32■□□□□ 0.2
Sdf4-201ENSMUST00000050078 Ccdc9Q8VC31 543 aaKnown RBP16.32■□□□□ 0.2
Sdf4-201ENSMUST00000050078 Cabp1Q9JLK7 227 aa16.31■□□□□ 0.2
Sdf4-201ENSMUST00000050078 Kif27Q7M6Z4 1394 aa16.29■□□□□ 0.2
Sdf4-201ENSMUST00000050078 Stk24Q99KH8 431 aa16.29■□□□□ 0.2
Sdf4-201ENSMUST00000050078 Armcx1Q9CX83 456 aa16.29■□□□□ 0.2
Sdf4-201ENSMUST00000050078 CftrP26361 1476 aa16.28■□□□□ 0.2
Sdf4-201ENSMUST00000050078 Mphosph9A6H5Y1 991 aa16.27■□□□□ 0.2
Sdf4-201ENSMUST00000050078 Rapgef2Q8CHG7 1496 aa16.27■□□□□ 0.2
Sdf4-201ENSMUST00000050078 Supt16hQ920B9 1047 aa16.27■□□□□ 0.19
Sdf4-201ENSMUST00000050078 Ythdc1E9Q5K9 736 aaKnown RBP16.26■□□□□ 0.19
Sdf4-201ENSMUST00000050078 Map4P27546 1125 aaKnown RBP16.26■□□□□ 0.19
Sdf4-201ENSMUST00000050078 Cnga1P29974 684 aa16.26■□□□□ 0.19
Sdf4-201ENSMUST00000050078 Trak1Q6PD31 939 aa16.26■□□□□ 0.19
Sdf4-201ENSMUST00000050078 Irx6Q9ER75 438 aa16.26■□□□□ 0.19
Sdf4-201ENSMUST00000050078 Exosc9Q9JHI7 438 aaKnown RBP16.26■□□□□ 0.19
Sdf4-201ENSMUST00000050078 IqubQ8CDK3 788 aa16.25■□□□□ 0.19
Sdf4-201ENSMUST00000050078 Baz1bQ9Z277 1479 aa16.25■□□□□ 0.19
Sdf4-201ENSMUST00000050078 Tcerg1Q8CGF7 1100 aaKnown RBP16.22■□□□□ 0.19
Sdf4-201ENSMUST00000050078 Bcl11aQ9QYE3 773 aa16.21■□□□□ 0.19
Sdf4-201ENSMUST00000050078 Sycp2Q9CUU3 1500 aa16.21■□□□□ 0.19
Sdf4-201ENSMUST00000050078 Ppm1gQ61074 542 aa16.21■□□□□ 0.19
Sdf4-201ENSMUST00000050078 Fyco1Q8VDC1 1437 aa16.2■□□□□ 0.18
Sdf4-201ENSMUST00000050078 Gm6268A2A3U9 297 aa16.2■□□□□ 0.18
Sdf4-201ENSMUST00000050078 Trim44Q9QXA7 346 aa16.2■□□□□ 0.18
Sdf4-201ENSMUST00000050078 Spryd3E9Q9B3 442 aa16.19■□□□□ 0.18
Sdf4-201ENSMUST00000050078 Plcb2A3KGF7 1181 aa16.19■□□□□ 0.18
Sdf4-201ENSMUST00000050078 Safb2Q80YR5 991 aaKnown RBP16.18■□□□□ 0.18
Sdf4-201ENSMUST00000050078 Rwdd1Q9CQK7 243 aa16.18■□□□□ 0.18
Sdf4-201ENSMUST00000050078 Mapk8ip3Q9ESN9 1337 aa16.17■□□□□ 0.18
Sdf4-201ENSMUST00000050078 Ifit1bl1D3Z6F0 470 aa16.17■□□□□ 0.18
Sdf4-201ENSMUST00000050078 Stag3O70576 1240 aa16.17■□□□□ 0.18
Sdf4-201ENSMUST00000050078 Chmp5Q9D7S9 219 aa16.17■□□□□ 0.18
Sdf4-201ENSMUST00000050078 Zscan21Q07231 555 aa16.16■□□□□ 0.18
Sdf4-201ENSMUST00000050078 Lmod3E9QA62 571 aa16.15■□□□□ 0.18
Sdf4-201ENSMUST00000050078 Ecm2Q5FW85 670 aa16.15■□□□□ 0.18
Sdf4-201ENSMUST00000050078 Htatsf1Q8BGC0 757 aa16.15■□□□□ 0.18
Sdf4-201ENSMUST00000050078 CntlnA2AM05 1397 aa16.15■□□□□ 0.18
Sdf4-201ENSMUST00000050078 Smarca2Q6DIC0 1577 aa16.15■□□□□ 0.18
Sdf4-201ENSMUST00000050078 Arhgap35Q91YM2 1499 aa16.15■□□□□ 0.18
Sdf4-201ENSMUST00000050078 Speer4f1Q9D5Q6 258 aa16.14■□□□□ 0.17
Sdf4-201ENSMUST00000050078 Crybg2B7ZCC2 1516 aa16.14■□□□□ 0.17
Sdf4-201ENSMUST00000050078 Nolc1E9Q5C9 702 aaKnown RBP16.14■□□□□ 0.17
Sdf4-201ENSMUST00000050078 Pds5bQ4VA53 1446 aaKnown RBP16.14■□□□□ 0.17
Sdf4-201ENSMUST00000050078 Synj1Q8CHC4 1574 aa16.13■□□□□ 0.17
Sdf4-201ENSMUST00000050078 1700019A02RikA0A087WPV9 146 aa16.13■□□□□ 0.17
Sdf4-201ENSMUST00000050078 Rpap1Q80TE0 1409 aa16.13■□□□□ 0.17
Retrieved 100 of 22,080 RNA–protein pairs in 70.1 ms