RNA–Protein interactions for RNA: ENSMUST00000034131.9

Vps35-201, Transcript of Vacuolar protein sorting-associated protein 35, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Vps35, Length 3,474 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Vps35-201ENSMUST00000034131 Fmn1Q05860 1466 aa18.54■□□□□ 0.56
Vps35-201ENSMUST00000034131 Top2aQ01320 1528 aaKnown RBP18.54■□□□□ 0.56
Vps35-201ENSMUST00000034131 Dnajc5bQ9CQ94 199 aa18.53■□□□□ 0.56
Vps35-201ENSMUST00000034131 Gm13697A2AK42 830 aa18.51■□□□□ 0.55
Vps35-201ENSMUST00000034131 Pak3Q61036 559 aa18.5■□□□□ 0.55
Vps35-201ENSMUST00000034131 Ccdc9Q8VC31 543 aaKnown RBP18.49■□□□□ 0.55
Vps35-201ENSMUST00000034131 Baz1bQ9Z277 1479 aa18.49■□□□□ 0.55
Vps35-201ENSMUST00000034131 Kdm5bQ80Y84 1544 aa18.48■□□□□ 0.55
Vps35-201ENSMUST00000034131 Gtf3c3Q3TMP1 882 aa18.47■□□□□ 0.55
Vps35-201ENSMUST00000034131 Fam50aQ9WV03 339 aaKnown RBP18.47■□□□□ 0.55
Vps35-201ENSMUST00000034131 Atad2bE9Q166 1460 aaKnown RBP18.45■□□□□ 0.54
Vps35-201ENSMUST00000034131 Eea1Q8BL66 1411 aa18.43■□□□□ 0.54
Vps35-201ENSMUST00000034131 Smg6P61406 1418 aaKnown RBP18.41■□□□□ 0.54
Vps35-201ENSMUST00000034131 Il27Q8K3I6 234 aa18.4■□□□□ 0.54
Vps35-201ENSMUST00000034131 Irx3P81067 507 aa18.4■□□□□ 0.54
Vps35-201ENSMUST00000034131 Liat1Q810M6 228 aa18.39■□□□□ 0.53
Vps35-201ENSMUST00000034131 Ccdc18Q640L5 1455 aa18.38■□□□□ 0.53
Vps35-201ENSMUST00000034131 Hsp90aa1P07901 733 aaKnown RBP18.38■□□□□ 0.53
Vps35-201ENSMUST00000034131 Cttnbp2B9EJA2 1648 aa18.38■□□□□ 0.53
Vps35-201ENSMUST00000034131 Hspa5P20029 655 aaKnown RBP18.36■□□□□ 0.53
Vps35-201ENSMUST00000034131 Smarca4Q3TKT4 1613 aaKnown RBP18.36■□□□□ 0.53
Vps35-201ENSMUST00000034131 UacaQ8CGB3 1411 aa18.35■□□□□ 0.53
Vps35-201ENSMUST00000034131 P3h3Q8CG70 732 aa18.35■□□□□ 0.53
Vps35-201ENSMUST00000034131 Setd5Q5XJV7 1441 aa18.34■□□□□ 0.53
Vps35-201ENSMUST00000034131 Arap1Q4LDD4 1452 aa18.33■□□□□ 0.53
Vps35-201ENSMUST00000034131 Fgd1P52734 960 aa18.33■□□□□ 0.52
Vps35-201ENSMUST00000034131 Plcd4Q8K3R3 807 aa18.32■□□□□ 0.52
Vps35-201ENSMUST00000034131 Ipo9Q91YE6 1041 aa18.32■□□□□ 0.52
Vps35-201ENSMUST00000034131 Sin3aQ60520 1274 aaKnown RBP18.31■□□□□ 0.52
Vps35-201ENSMUST00000034131 Egfem1Q8C088 590 aa18.31■□□□□ 0.52
Vps35-201ENSMUST00000034131 Mrs2Q5NCE8 434 aa18.29■□□□□ 0.52
Vps35-201ENSMUST00000034131 NrdcQ8BHG1 1161 aa18.29■□□□□ 0.52
Vps35-201ENSMUST00000034131 Thoc2B1AZI6 1594 aaKnown RBP18.28■□□□□ 0.52
Vps35-201ENSMUST00000034131 Slc4a3P16283 1227 aa18.28■□□□□ 0.52
Vps35-201ENSMUST00000034131 Ccer2J3QPU5 274 aa18.28■□□□□ 0.52
Vps35-201ENSMUST00000034131 BlmO88700 1416 aa18.27■□□□□ 0.51
Vps35-201ENSMUST00000034131 Ercc6F8VPZ5 1481 aa18.27■□□□□ 0.51
Vps35-201ENSMUST00000034131 4933416C03RikQ3V063 378 aa18.26■□□□□ 0.51
Vps35-201ENSMUST00000034131 Eif4g1Q6NZJ6 1600 aaKnown RBP18.26■□□□□ 0.51
Vps35-201ENSMUST00000034131 Iqgap2Q3UQ44 1575 aa18.25■□□□□ 0.51
Vps35-201ENSMUST00000034131 Arhgef5E9Q7D5 1581 aa18.24■□□□□ 0.51
Vps35-201ENSMUST00000034131 TchhA0A0B4J1F9 1599 aa18.22■□□□□ 0.51
Vps35-201ENSMUST00000034131 Arhgap35Q91YM2 1499 aa18.21■□□□□ 0.51
Vps35-201ENSMUST00000034131 Ube2uB1AUC4 352 aa18.19■□□□□ 0.5
Vps35-201ENSMUST00000034131 Pknox2Q8BG99 474 aa18.19■□□□□ 0.5
Vps35-201ENSMUST00000034131 DaxxO35613 739 aa18.18■□□□□ 0.5
Vps35-201ENSMUST00000034131 Ankrd36D3Z4K0 1415 aa18.17■□□□□ 0.5
Vps35-201ENSMUST00000034131 Tcerg1Q8CGF7 1100 aaKnown RBP18.17■□□□□ 0.5
Vps35-201ENSMUST00000034131 Wwc2Q6NXJ0 1187 aa18.13■□□□□ 0.49
Vps35-201ENSMUST00000034131 Slc4a2P13808 1237 aaKnown RBP18.13■□□□□ 0.49
Vps35-201ENSMUST00000034131 Lmod2Q3UHZ5 550 aa18.13■□□□□ 0.49
Vps35-201ENSMUST00000034131 Tiam1Q60610 1591 aa18.1■□□□□ 0.49
Vps35-201ENSMUST00000034131 Naip1Q9QWK5 1403 aa18.09■□□□□ 0.49
Vps35-201ENSMUST00000034131 Iqcf3Q9D498 203 aa18.08■□□□□ 0.49
Vps35-201ENSMUST00000034131 Mia2Q91ZV0 1396 aa18.08■□□□□ 0.49
Vps35-201ENSMUST00000034131 Ncoa2Q61026 1462 aa18.08■□□□□ 0.49
Vps35-201ENSMUST00000034131 Dhx29Q6PGC1 1365 aaKnown RBP18.07■□□□□ 0.48
Vps35-201ENSMUST00000034131 Ipo4Q8VI75 1082 aa18.06■□□□□ 0.48
Vps35-201ENSMUST00000034131 Exoc6Q8R313 802 aa18.06■□□□□ 0.48
Vps35-201ENSMUST00000034131 Gm13695A2AK44 830 aa18.05■□□□□ 0.48
Vps35-201ENSMUST00000034131 Frmpd1A2AKB4 1549 aa18.05■□□□□ 0.48
Vps35-201ENSMUST00000034131 Fhad1A6PWD2 1420 aa18.05■□□□□ 0.48
Vps35-201ENSMUST00000034131 Camsap2Q8C1B1 1461 aa18.04■□□□□ 0.48
Vps35-201ENSMUST00000034131 Wdr62Q3U3T8 1523 aa18.04■□□□□ 0.48
Vps35-201ENSMUST00000034131 Ofd1Q80Z25 1017 aa18.03■□□□□ 0.48
Vps35-201ENSMUST00000034131 PtprkP35822 1457 aa18.02■□□□□ 0.48
Vps35-201ENSMUST00000034131 Arhgap27A2AB59 869 aa18.01■□□□□ 0.47
Vps35-201ENSMUST00000034131 ChgaP26339 463 aaKnown RBP18■□□□□ 0.47
Vps35-201ENSMUST00000034131 Kcnh8P59111 1102 aa18■□□□□ 0.47
Vps35-201ENSMUST00000034131 NrkQ9R0G8 1455 aa17.99■□□□□ 0.47
Vps35-201ENSMUST00000034131 AqrQ8CFQ3 1481 aaKnown RBP17.99■□□□□ 0.47
Vps35-201ENSMUST00000034131 Fyco1Q8VDC1 1437 aa17.97■□□□□ 0.47
Vps35-201ENSMUST00000034131 Vps8Q0P5W1 1427 aa17.96■□□□□ 0.47
Vps35-201ENSMUST00000034131 Naip5Q9R016 1403 aa17.96■□□□□ 0.47
Vps35-201ENSMUST00000034131 PnisrA2AJT4 805 aaKnown RBP17.94■□□□□ 0.46
Vps35-201ENSMUST00000034131 Phldb1Q6PDH0 1371 aaKnown RBP17.94■□□□□ 0.46
Vps35-201ENSMUST00000034131 NeflP08551 543 aa17.92■□□□□ 0.46
Vps35-201ENSMUST00000034131 3425401B19RikD3Z1D3 1412 aa17.92■□□□□ 0.46
Vps35-201ENSMUST00000034131 Fam135aQ6NS59 1506 aa17.92■□□□□ 0.46
Vps35-201ENSMUST00000034131 Ubl4bQ9CQ84 188 aa17.91■□□□□ 0.46
Vps35-201ENSMUST00000034131 L3mbtl2P59178 703 aa17.89■□□□□ 0.45
Vps35-201ENSMUST00000034131 Map3k1P53349 1493 aa17.88■□□□□ 0.45
Vps35-201ENSMUST00000034131 CanxP35564 591 aaKnown RBP17.86■□□□□ 0.45
Vps35-201ENSMUST00000034131 Slx4Q6P1D7 1565 aa17.86■□□□□ 0.45
Vps35-201ENSMUST00000034131 CntlnA2AM05 1397 aa17.85■□□□□ 0.45
Vps35-201ENSMUST00000034131 Efcab5A0JP43 1406 aa17.85■□□□□ 0.45
Vps35-201ENSMUST00000034131 Chic2Q9D9G3 165 aa17.84■□□□□ 0.45
Vps35-201ENSMUST00000034131 Ncoa1P70365 1447 aa17.83■□□□□ 0.45
Vps35-201ENSMUST00000034131 Shroom4Q1W617 1475 aa17.82■□□□□ 0.44
Vps35-201ENSMUST00000034131 Anp32bQ9EST5 272 aaKnown RBP17.81■□□□□ 0.44
Vps35-201ENSMUST00000034131 Naip2Q9QUK4 1447 aa17.8■□□□□ 0.44
Vps35-201ENSMUST00000034131 Pcf11G3X9Z4 1553 aa17.79■□□□□ 0.44
Vps35-201ENSMUST00000034131 Pdcl3Q8BVF2 240 aa17.76■□□□□ 0.43
Vps35-201ENSMUST00000034131 Ankrd26Q811D2 1581 aa17.76■□□□□ 0.43
Vps35-201ENSMUST00000034131 Pprc1Q6NZN1 1644 aa17.76■□□□□ 0.43
Vps35-201ENSMUST00000034131 Mphosph9A6H5Y1 991 aa17.75■□□□□ 0.43
Vps35-201ENSMUST00000034131 Sart3Q9JLI8 962 aaKnown RBP17.75■□□□□ 0.43
Vps35-201ENSMUST00000034131 Crocc2F6XLV1 1638 aa17.74■□□□□ 0.43
Vps35-201ENSMUST00000034131 EprsQ8CGC7 1512 aaKnown RBP17.74■□□□□ 0.43
Vps35-201ENSMUST00000034131 Erich3F6QRE9 1637 aa17.74■□□□□ 0.43
Retrieved 100 of 22,080 RNA–protein pairs in 7.3 ms