RNA–Protein interactions for RNA: ENSMUST00000029480.8

Prpf38b-201, Transcript of Pre-mRNA-splicing factor 38B, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Prpf38b, Length 3,026 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Prpf38b-201ENSMUST00000029480 Tiam1Q60610 1591 aa20■□□□□ 0.79
Prpf38b-201ENSMUST00000029480 Lmo7E9PYF4 1699 aaKnown RBP20■□□□□ 0.79
Prpf38b-201ENSMUST00000029480 Eea1Q8BL66 1411 aa19.98■□□□□ 0.79
Prpf38b-201ENSMUST00000029480 Lrriq1Q0P5X1 1673 aa19.98■□□□□ 0.79
Prpf38b-201ENSMUST00000029480 Polr1aO35134 1717 aaKnown RBP19.97■□□□□ 0.79
Prpf38b-201ENSMUST00000029480 Zeb1Q64318 1117 aa19.95■□□□□ 0.78
Prpf38b-201ENSMUST00000029480 Ankrd26Q811D2 1581 aa19.93■□□□□ 0.78
Prpf38b-201ENSMUST00000029480 Kdm5bQ80Y84 1544 aa19.92■□□□□ 0.78
Prpf38b-201ENSMUST00000029480 Samd9lQ69Z37 1561 aa19.9■□□□□ 0.78
Prpf38b-201ENSMUST00000029480 Urb2E9Q7L1 1524 aaKnown RBP19.9■□□□□ 0.78
Prpf38b-201ENSMUST00000029480 Rpap1Q80TE0 1409 aa19.89■□□□□ 0.77
Prpf38b-201ENSMUST00000029480 Arap1Q4LDD4 1452 aa19.89■□□□□ 0.77
Prpf38b-201ENSMUST00000029480 Mier1Q5UAK0 511 aa19.88■□□□□ 0.77
Prpf38b-201ENSMUST00000029480 Plb1Q3TTY0 1478 aa19.87■□□□□ 0.77
Prpf38b-201ENSMUST00000029480 Clip1Q922J3 1391 aa19.85■□□□□ 0.77
Prpf38b-201ENSMUST00000029480 EprsQ8CGC7 1512 aaKnown RBP19.81■□□□□ 0.76
Prpf38b-201ENSMUST00000029480 Ift140E9PY46 1464 aa19.81■□□□□ 0.76
Prpf38b-201ENSMUST00000029480 Cux1P53564 1515 aa19.8■□□□□ 0.76
Prpf38b-201ENSMUST00000029480 SynmQ70IV5 1561 aa19.8■□□□□ 0.76
Prpf38b-201ENSMUST00000029480 Pbrm1Q8BSQ9 1634 aaKnown RBP19.8■□□□□ 0.76
Prpf38b-201ENSMUST00000029480 Carmil1Q6EDY6 1374 aa19.78■□□□□ 0.76
Prpf38b-201ENSMUST00000029480 Eif4g3Q80XI3 1579 aaKnown RBP19.76■□□□□ 0.75
Prpf38b-201ENSMUST00000029480 Pcf11G3X9Z4 1553 aa19.76■□□□□ 0.75
Prpf38b-201ENSMUST00000029480 Npm2Q80W85 207 aa19.75■□□□□ 0.75
Prpf38b-201ENSMUST00000029480 Disp1Q3TDN0 1521 aa19.75■□□□□ 0.75
Prpf38b-201ENSMUST00000029480 CatipB9EKE5 520 aa19.74■□□□□ 0.75
Prpf38b-201ENSMUST00000029480 Fhod3Q76LL6 1578 aa19.74■□□□□ 0.75
Prpf38b-201ENSMUST00000029480 CntlnA2AM05 1397 aa19.71■□□□□ 0.75
Prpf38b-201ENSMUST00000029480 Magi3Q9EQJ9 1476 aa19.7■□□□□ 0.74
Prpf38b-201ENSMUST00000029480 Nup160Q9Z0W3 1402 aaKnown RBP19.68■□□□□ 0.74
Prpf38b-201ENSMUST00000029480 Naip1Q9QWK5 1403 aa19.67■□□□□ 0.74
Prpf38b-201ENSMUST00000029480 Rad54l2Q99NG0 1466 aa19.67■□□□□ 0.74
Prpf38b-201ENSMUST00000029480 Fyco1Q8VDC1 1437 aa19.67■□□□□ 0.74
Prpf38b-201ENSMUST00000029480 Camsap2Q8C1B1 1461 aa19.66■□□□□ 0.74
Prpf38b-201ENSMUST00000029480 Pla2r1Q62028 1487 aa19.65■□□□□ 0.74
Prpf38b-201ENSMUST00000029480 Grin2aP35436 1464 aa19.65■□□□□ 0.74
Prpf38b-201ENSMUST00000029480 BlmO88700 1416 aa19.64■□□□□ 0.73
Prpf38b-201ENSMUST00000029480 Abca5Q8K448 1642 aa19.63■□□□□ 0.73
Prpf38b-201ENSMUST00000029480 Sall2Q9QX96 1004 aa19.62■□□□□ 0.73
Prpf38b-201ENSMUST00000029480 Setd1bQ8CFT2 1985 aa19.62■□□□□ 0.73
Prpf38b-201ENSMUST00000029480 Rusc2Q80U22 1514 aa19.62■□□□□ 0.73
Prpf38b-201ENSMUST00000029480 Slx4Q6P1D7 1565 aa19.61■□□□□ 0.73
Prpf38b-201ENSMUST00000029480 Setd5Q5XJV7 1441 aa19.61■□□□□ 0.73
Prpf38b-201ENSMUST00000029480 Ankrd36D3Z4K0 1415 aa19.6■□□□□ 0.73
Prpf38b-201ENSMUST00000029480 Gcc2Q8CHG3 1679 aa19.59■□□□□ 0.73
Prpf38b-201ENSMUST00000029480 Plppr3Q7TPB0 716 aa19.59■□□□□ 0.73
Prpf38b-201ENSMUST00000029480 Cc2d2bA0A286YDU8 1405 aa19.58■□□□□ 0.73
Prpf38b-201ENSMUST00000029480 Lmtk2Q3TYD6 1471 aa19.55■□□□□ 0.72
Prpf38b-201ENSMUST00000029480 Cul7Q8VE73 1689 aa19.55■□□□□ 0.72
Prpf38b-201ENSMUST00000029480 Adamts12Q811B3 1600 aa19.55■□□□□ 0.72
Prpf38b-201ENSMUST00000029480 Csrnp3P59055 597 aa19.54■□□□□ 0.72
Prpf38b-201ENSMUST00000029480 Fhad1A6PWD2 1420 aa19.54■□□□□ 0.72
Prpf38b-201ENSMUST00000029480 UbtfP25976 765 aaKnown RBP19.54■□□□□ 0.72
Prpf38b-201ENSMUST00000029480 Aplp2Q06335 707 aa19.53■□□□□ 0.72
Prpf38b-201ENSMUST00000029480 UacaQ8CGB3 1411 aa19.5■□□□□ 0.71
Prpf38b-201ENSMUST00000029480 Mia2Q91ZV0 1396 aa19.5■□□□□ 0.71
Prpf38b-201ENSMUST00000029480 Vps8Q0P5W1 1427 aa19.49■□□□□ 0.71
Prpf38b-201ENSMUST00000029480 ClspnQ80YR7 1315 aa19.47■□□□□ 0.71
Prpf38b-201ENSMUST00000029480 Ccer2J3QPU5 274 aa19.47■□□□□ 0.71
Prpf38b-201ENSMUST00000029480 Myt1lP97500 1187 aa19.46■□□□□ 0.71
Prpf38b-201ENSMUST00000029480 Abca16E9PWJ7 1678 aa19.42■□□□□ 0.7
Prpf38b-201ENSMUST00000029480 WizO88286 1684 aaKnown RBP19.41■□□□□ 0.7
Prpf38b-201ENSMUST00000029480 Gm1043A0A140LJC2 1431 aa19.41■□□□□ 0.7
Prpf38b-201ENSMUST00000029480 Rfx7F8VPJ6 1459 aa19.4■□□□□ 0.7
Prpf38b-201ENSMUST00000029480 Anks4bQ8K3X6 423 aa19.39■□□□□ 0.69
Prpf38b-201ENSMUST00000029480 Setbp1Q9Z180 1582 aa19.38■□□□□ 0.69
Prpf38b-201ENSMUST00000029480 CadpsQ80TJ1 1355 aa19.37■□□□□ 0.69
Prpf38b-201ENSMUST00000029480 Ifnlr1Q8CGK5 535 aa19.37■□□□□ 0.69
Prpf38b-201ENSMUST00000029480 TonslQ6NZL6 1363 aa19.37■□□□□ 0.69
Prpf38b-201ENSMUST00000029480 Wdr66E9Q743 1299 aa19.36■□□□□ 0.69
Prpf38b-201ENSMUST00000029480 Aebp2Q9Z248 504 aaKnown RBP19.35■□□□□ 0.69
Prpf38b-201ENSMUST00000029480 Gm7298A0A0N4SVU1 1476 aa19.35■□□□□ 0.69
Prpf38b-201ENSMUST00000029480 Soga1E1U8D0 1418 aa19.35■□□□□ 0.69
Prpf38b-201ENSMUST00000029480 Abcc2Q8VI47 1543 aa19.35■□□□□ 0.69
Prpf38b-201ENSMUST00000029480 Pknox2Q8BG99 474 aa19.34■□□□□ 0.69
Prpf38b-201ENSMUST00000029480 PxdnQ3UQ28 1475 aa19.33■□□□□ 0.69
Prpf38b-201ENSMUST00000029480 Kif21bQ9QXL1 1668 aa19.33■□□□□ 0.69
Prpf38b-201ENSMUST00000029480 Naip2Q9QUK4 1447 aa19.32■□□□□ 0.68
Prpf38b-201ENSMUST00000029480 Ttbk1Q6PCN3 1308 aa19.31■□□□□ 0.68
Prpf38b-201ENSMUST00000029480 Lamc1P02468 1607 aaKnown RBP19.31■□□□□ 0.68
Prpf38b-201ENSMUST00000029480 Map3k4O08648 1597 aa19.3■□□□□ 0.68
Prpf38b-201ENSMUST00000029480 Pprc1Q6NZN1 1644 aa19.29■□□□□ 0.68
Prpf38b-201ENSMUST00000029480 Ppargc1bQ8VHJ7 1014 aa19.28■□□□□ 0.68
Prpf38b-201ENSMUST00000029480 Dnmt1P13864 1620 aaKnown RBP19.26■□□□□ 0.67
Prpf38b-201ENSMUST00000029480 3425401B19RikD3Z1D3 1412 aa19.26■□□□□ 0.67
Prpf38b-201ENSMUST00000029480 Fgd6Q69ZL1 1399 aa19.22■□□□□ 0.67
Prpf38b-201ENSMUST00000029480 Fgd1P52734 960 aa19.21■□□□□ 0.67
Prpf38b-201ENSMUST00000029480 Shroom2A2ALU4 1481 aa19.2■□□□□ 0.66
Prpf38b-201ENSMUST00000029480 Arhgef40Q3UPH7 1517 aa19.17■□□□□ 0.66
Prpf38b-201ENSMUST00000029480 BC005561E9Q5E2 1589 aa19.16■□□□□ 0.66
Prpf38b-201ENSMUST00000029480 Rapgef6Q5NCJ1 1609 aa19.15■□□□□ 0.66
Prpf38b-201ENSMUST00000029480 Aebp1Q640N1 1128 aa19.14■□□□□ 0.65
Prpf38b-201ENSMUST00000029480 Plekhg3Q4VAC9 1341 aa19.14■□□□□ 0.65
Prpf38b-201ENSMUST00000029480 Kiaa1551Q5DTW7 1521 aa19.12■□□□□ 0.65
Prpf38b-201ENSMUST00000029480 DroshaQ5HZJ0 1373 aaKnown RBP19.12■□□□□ 0.65
Prpf38b-201ENSMUST00000029480 NrdcQ8BHG1 1161 aa19.12■□□□□ 0.65
Prpf38b-201ENSMUST00000029480 Neurl4Q5NCX5 1563 aa19.12■□□□□ 0.65
Prpf38b-201ENSMUST00000029480 Cdc42bpaQ3UU96 1719 aa19.12■□□□□ 0.65
Prpf38b-201ENSMUST00000029480 A2mQ6GQT1 1474 aa19.11■□□□□ 0.65
Prpf38b-201ENSMUST00000029480 Arhgap27A2AB59 869 aa19.1■□□□□ 0.65
Retrieved 100 of 22,080 RNA–protein pairs in 24 ms