RNA–Protein interactions for RNA: ENSMUST00000029446.12

Csde1-201, Transcript of Cold shock domain-containing protein E1, mousemouse

APPRIS P3 TSL 1 (best) BASIC

Gene Csde1, Length 4,318 nt, Biotype protein coding, Subcellular localisation Exosome, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Csde1-201ENSMUST00000029446 Unc13aQ4KUS2 1712 aa10.19□□□□□ -0.78
Csde1-201ENSMUST00000029446 PrkcshO08795 521 aa10.19□□□□□ -0.78
Csde1-201ENSMUST00000029446 Carmil1Q6EDY6 1374 aa10.18□□□□□ -0.78
Csde1-201ENSMUST00000029446 PogzQ8BZH4 1409 aaKnown RBP10.18□□□□□ -0.78
Csde1-201ENSMUST00000029446 Mrc2Q64449 1479 aa10.16□□□□□ -0.78
Csde1-201ENSMUST00000029446 Duox2A2AQ99 1517 aa10.16□□□□□ -0.78
Csde1-201ENSMUST00000029446 Mroh2bQ7M6Y6 1581 aa10.16□□□□□ -0.78
Csde1-201ENSMUST00000029446 BlmO88700 1416 aa10.15□□□□□ -0.78
Csde1-201ENSMUST00000029446 Lmod2Q3UHZ5 550 aa10.14□□□□□ -0.79
Csde1-201ENSMUST00000029446 Cdk11bP24788 784 aaKnown RBP10.12□□□□□ -0.79
Csde1-201ENSMUST00000029446 Fam50aQ9WV03 339 aaKnown RBP10.12□□□□□ -0.79
Csde1-201ENSMUST00000029446 AqrQ8CFQ3 1481 aaKnown RBP10.11□□□□□ -0.79
Csde1-201ENSMUST00000029446 Eif4g1Q6NZJ6 1600 aaKnown RBP10.1□□□□□ -0.79
Csde1-201ENSMUST00000029446 Rpap1Q80TE0 1409 aa10.09□□□□□ -0.79
Csde1-201ENSMUST00000029446 Slc24a1Q91WD8 1130 aa10.09□□□□□ -0.79
Csde1-201ENSMUST00000029446 TonslQ6NZL6 1363 aa10.09□□□□□ -0.79
Csde1-201ENSMUST00000029446 CntlnA2AM05 1397 aa10.08□□□□□ -0.8
Csde1-201ENSMUST00000029446 Nop58Q6DFW4 536 aaKnown RBP10.08□□□□□ -0.8
Csde1-201ENSMUST00000029446 Neurod1Q60867 357 aa10.08□□□□□ -0.8
Csde1-201ENSMUST00000029446 Fyco1Q8VDC1 1437 aa10.08□□□□□ -0.8
Csde1-201ENSMUST00000029446 Polr1aO35134 1717 aaKnown RBP10.07□□□□□ -0.8
Csde1-201ENSMUST00000029446 Arap1Q4LDD4 1452 aa10.07□□□□□ -0.8
Csde1-201ENSMUST00000029446 Crocc2F6XLV1 1638 aa10.06□□□□□ -0.8
Csde1-201ENSMUST00000029446 Arhgef5E9Q7D5 1581 aa10.05□□□□□ -0.8
Csde1-201ENSMUST00000029446 SynmQ70IV5 1561 aa10.04□□□□□ -0.8
Csde1-201ENSMUST00000029446 Aebp1Q640N1 1128 aa10.04□□□□□ -0.8
Csde1-201ENSMUST00000029446 Rad54l2Q99NG0 1466 aa10.03□□□□□ -0.8
Csde1-201ENSMUST00000029446 Gm38655A0A286YDK6 273 aa10.03□□□□□ -0.8
Csde1-201ENSMUST00000029446 1700123L14RikQ3V2K7 440 aa10.02□□□□□ -0.81
Csde1-201ENSMUST00000029446 Sall2Q9QX96 1004 aa10.02□□□□□ -0.81
Csde1-201ENSMUST00000029446 Dnajc5bQ9CQ94 199 aa10.01□□□□□ -0.81
Csde1-201ENSMUST00000029446 Ccer2J3QPU5 274 aa10□□□□□ -0.81
Csde1-201ENSMUST00000029446 Tiam1Q60610 1591 aa10□□□□□ -0.81
Csde1-201ENSMUST00000029446 NclP09405 707 aaKnown RBP10□□□□□ -0.81
Csde1-201ENSMUST00000029446 Urb2E9Q7L1 1524 aaKnown RBP9.99□□□□□ -0.81
Csde1-201ENSMUST00000029446 Naip1Q9QWK5 1403 aa9.99□□□□□ -0.81
Csde1-201ENSMUST00000029446 Ankrd26Q811D2 1581 aa9.99□□□□□ -0.81
Csde1-201ENSMUST00000029446 Plb1Q3TTY0 1478 aa9.98□□□□□ -0.81
Csde1-201ENSMUST00000029446 Kif27Q7M6Z4 1394 aa9.98□□□□□ -0.81
Csde1-201ENSMUST00000029446 Eid3Q3V124 375 aa9.98□□□□□ -0.81
Csde1-201ENSMUST00000029446 Kif21aQ9QXL2 1672 aa9.97□□□□□ -0.81
Csde1-201ENSMUST00000029446 Samd9lQ69Z37 1561 aa9.97□□□□□ -0.81
Csde1-201ENSMUST00000029446 Ift140E9PY46 1464 aa9.97□□□□□ -0.81
Csde1-201ENSMUST00000029446 Arhgap27A2AB59 869 aa9.96□□□□□ -0.81
Csde1-201ENSMUST00000029446 EprsQ8CGC7 1512 aaKnown RBP9.96□□□□□ -0.82
Csde1-201ENSMUST00000029446 Pcf11G3X9Z4 1553 aa9.96□□□□□ -0.82
Csde1-201ENSMUST00000029446 Cux1P53564 1515 aa9.96□□□□□ -0.82
Csde1-201ENSMUST00000029446 Erich3F6QRE9 1637 aa9.95□□□□□ -0.82
Csde1-201ENSMUST00000029446 Ncapd3Q6ZQK0 1506 aa9.95□□□□□ -0.82
Csde1-201ENSMUST00000029446 Mia2Q91ZV0 1396 aa9.94□□□□□ -0.82
Csde1-201ENSMUST00000029446 Csrnp3P59055 597 aa9.94□□□□□ -0.82
Csde1-201ENSMUST00000029446 Pknox2Q8BG99 474 aa9.94□□□□□ -0.82
Csde1-201ENSMUST00000029446 Grin2aP35436 1464 aa9.93□□□□□ -0.82
Csde1-201ENSMUST00000029446 Gm7298A0A0N4SVU1 1476 aa9.92□□□□□ -0.82
Csde1-201ENSMUST00000029446 ClspnQ80YR7 1315 aa9.91□□□□□ -0.82
Csde1-201ENSMUST00000029446 CadpsQ80TJ1 1355 aa9.91□□□□□ -0.82
Csde1-201ENSMUST00000029446 Stra8P70278 393 aa9.9□□□□□ -0.82
Csde1-201ENSMUST00000029446 Cc2d2bA0A286YDU8 1405 aa9.89□□□□□ -0.83
Csde1-201ENSMUST00000029446 Pla2r1Q62028 1487 aa9.89□□□□□ -0.83
Csde1-201ENSMUST00000029446 Disp1Q3TDN0 1521 aa9.88□□□□□ -0.83
Csde1-201ENSMUST00000029446 TchhA0A0B4J1F9 1599 aa9.88□□□□□ -0.83
Csde1-201ENSMUST00000029446 WrnO09053 1401 aa9.87□□□□□ -0.83
Csde1-201ENSMUST00000029446 Slx4Q6P1D7 1565 aa9.87□□□□□ -0.83
Csde1-201ENSMUST00000029446 Chic2Q9D9G3 165 aa9.87□□□□□ -0.83
Csde1-201ENSMUST00000029446 Ccnb3Q810T2 1396 aa9.86□□□□□ -0.83
Csde1-201ENSMUST00000029446 Magi3Q9EQJ9 1476 aa9.85□□□□□ -0.83
Csde1-201ENSMUST00000029446 Lmo7E9PYF4 1699 aaKnown RBP9.85□□□□□ -0.83
Csde1-201ENSMUST00000029446 Soga1E1U8D0 1418 aa9.85□□□□□ -0.83
Csde1-201ENSMUST00000029446 Fkbp15Q6P9Q6 1216 aaKnown RBP9.85□□□□□ -0.83
Csde1-201ENSMUST00000029446 Peg3Q3URU2 1571 aa9.84□□□□□ -0.83
Csde1-201ENSMUST00000029446 Dhx57Q6P5D3 1388 aaKnown RBP9.84□□□□□ -0.83
Csde1-201ENSMUST00000029446 Pbrm1Q8BSQ9 1634 aaKnown RBP9.83□□□□□ -0.84
Csde1-201ENSMUST00000029446 Fhad1A6PWD2 1420 aa9.82□□□□□ -0.84
Csde1-201ENSMUST00000029446 Eif5bQ05D44 1216 aaKnown RBP9.82□□□□□ -0.84
Csde1-201ENSMUST00000029446 Rtl5Q5DTT4 599 aa9.81□□□□□ -0.84
Csde1-201ENSMUST00000029446 UacaQ8CGB3 1411 aa9.81□□□□□ -0.84
Csde1-201ENSMUST00000029446 Gpatch8A2A6A1 1505 aa9.81□□□□□ -0.84
Csde1-201ENSMUST00000029446 CatipB9EKE5 520 aa9.81□□□□□ -0.84
Csde1-201ENSMUST00000029446 Aebp2Q9Z248 504 aaKnown RBP9.81□□□□□ -0.84
Csde1-201ENSMUST00000029446 Nup160Q9Z0W3 1402 aaKnown RBP9.81□□□□□ -0.84
Csde1-201ENSMUST00000029446 Mtus2Q3UHD3 1353 aa9.81□□□□□ -0.84
Csde1-201ENSMUST00000029446 WizO88286 1684 aaKnown RBP9.81□□□□□ -0.84
Csde1-201ENSMUST00000029446 Ncoa2Q61026 1462 aa9.8□□□□□ -0.84
Csde1-201ENSMUST00000029446 AknaQ80VW7 1404 aa9.8□□□□□ -0.84
Csde1-201ENSMUST00000029446 Gm1043A0A140LJC2 1431 aa9.8□□□□□ -0.84
Csde1-201ENSMUST00000029446 Abca5Q8K448 1642 aa9.79□□□□□ -0.84
Csde1-201ENSMUST00000029446 Vps8Q0P5W1 1427 aa9.79□□□□□ -0.84
Csde1-201ENSMUST00000029446 Aplp2Q06335 707 aa9.77□□□□□ -0.85
Csde1-201ENSMUST00000029446 Adamts12Q811B3 1600 aa9.77□□□□□ -0.85
Csde1-201ENSMUST00000029446 Plekhh2Q8C115 1491 aa9.77□□□□□ -0.85
Csde1-201ENSMUST00000029446 4933416C03RikQ3V063 378 aa9.77□□□□□ -0.85
Csde1-201ENSMUST00000029446 4930567H17RikQ3V0K5 233 aa9.77□□□□□ -0.85
Csde1-201ENSMUST00000029446 Tnnt3Q9QZ47 272 aa9.77□□□□□ -0.85
Csde1-201ENSMUST00000029446 Lrriq1Q0P5X1 1673 aa9.77□□□□□ -0.85
Csde1-201ENSMUST00000029446 PxdnQ3UQ28 1475 aa9.76□□□□□ -0.85
Csde1-201ENSMUST00000029446 NrdcQ8BHG1 1161 aa9.76□□□□□ -0.85
Csde1-201ENSMUST00000029446 Arhgap31A6X8Z5 1425 aa9.75□□□□□ -0.85
Csde1-201ENSMUST00000029446 Ankrd36D3Z4K0 1415 aa9.75□□□□□ -0.85
Csde1-201ENSMUST00000029446 NexmifQ5DTT1 1515 aa9.75□□□□□ -0.85
Csde1-201ENSMUST00000029446 Jph4Q80WT0 628 aa9.75□□□□□ -0.85
Retrieved 100 of 22,080 RNA–protein pairs in 12.8 ms