RNA–Protein interactions for RNA: ENSMUST00000015981.11

Sqstm1-201, Transcript of Sequestosome-1, mousemouse

TSL 1 (best) BASIC

Gene Sqstm1, Length 2,673 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Sqstm1-201ENSMUST00000015981 PrkcshO08795 521 aa24.94■■□□□ 1.58
Sqstm1-201ENSMUST00000015981 Supt16hQ920B9 1047 aa24.88■■□□□ 1.57
Sqstm1-201ENSMUST00000015981 Setd5Q5XJV7 1441 aa24.86■■□□□ 1.57
Sqstm1-201ENSMUST00000015981 UacaQ8CGB3 1411 aa24.86■■□□□ 1.57
Sqstm1-201ENSMUST00000015981 Gm13697A2AK42 830 aa24.82■■□□□ 1.56
Sqstm1-201ENSMUST00000015981 Tiam1Q60610 1591 aa24.8■■□□□ 1.56
Sqstm1-201ENSMUST00000015981 NrkQ9R0G8 1455 aa24.79■■□□□ 1.56
Sqstm1-201ENSMUST00000015981 PtprkP35822 1457 aa24.76■■□□□ 1.55
Sqstm1-201ENSMUST00000015981 TnnQ80Z71 1560 aa24.73■■□□□ 1.55
Sqstm1-201ENSMUST00000015981 Washc2Q6PGL7 1334 aa24.72■■□□□ 1.55
Sqstm1-201ENSMUST00000015981 Fam50aQ9WV03 339 aaKnown RBP24.69■■□□□ 1.54
Sqstm1-201ENSMUST00000015981 Smg6P61406 1418 aaKnown RBP24.68■■□□□ 1.54
Sqstm1-201ENSMUST00000015981 Naip1Q9QWK5 1403 aa24.68■■□□□ 1.54
Sqstm1-201ENSMUST00000015981 BlmO88700 1416 aa24.68■■□□□ 1.54
Sqstm1-201ENSMUST00000015981 Ppp4r2Q0VGB7 417 aa24.67■■□□□ 1.54
Sqstm1-201ENSMUST00000015981 Wdr43Q6ZQL4 677 aaKnown RBP24.67■■□□□ 1.54
Sqstm1-201ENSMUST00000015981 Hspa5P20029 655 aaKnown RBP24.65■■□□□ 1.54
Sqstm1-201ENSMUST00000015981 Ankrd36D3Z4K0 1415 aa24.65■■□□□ 1.54
Sqstm1-201ENSMUST00000015981 Iqgap2Q3UQ44 1575 aa24.64■■□□□ 1.54
Sqstm1-201ENSMUST00000015981 Map3k1P53349 1493 aa24.63■■□□□ 1.53
Sqstm1-201ENSMUST00000015981 Slc24a1Q91WD8 1130 aa24.62■■□□□ 1.53
Sqstm1-201ENSMUST00000015981 AqrQ8CFQ3 1481 aaKnown RBP24.6■■□□□ 1.53
Sqstm1-201ENSMUST00000015981 Ccer2J3QPU5 274 aa24.58■■□□□ 1.52
Sqstm1-201ENSMUST00000015981 Camsap2Q8C1B1 1461 aa24.55■■□□□ 1.52
Sqstm1-201ENSMUST00000015981 Shroom4Q1W617 1475 aa24.54■■□□□ 1.52
Sqstm1-201ENSMUST00000015981 Erich3F6QRE9 1637 aa24.54■■□□□ 1.52
Sqstm1-201ENSMUST00000015981 Fhad1A6PWD2 1420 aa24.53■■□□□ 1.52
Sqstm1-201ENSMUST00000015981 Ncoa2Q61026 1462 aa24.52■■□□□ 1.52
Sqstm1-201ENSMUST00000015981 Slx4Q6P1D7 1565 aa24.52■■□□□ 1.52
Sqstm1-201ENSMUST00000015981 Dhx29Q6PGC1 1365 aaKnown RBP24.52■■□□□ 1.52
Sqstm1-201ENSMUST00000015981 Sin3aQ60520 1274 aaKnown RBP24.49■■□□□ 1.51
Sqstm1-201ENSMUST00000015981 Mia2Q91ZV0 1396 aa24.48■■□□□ 1.51
Sqstm1-201ENSMUST00000015981 Eif5bQ05D44 1216 aaKnown RBP24.47■■□□□ 1.51
Sqstm1-201ENSMUST00000015981 Ankrd26Q811D2 1581 aa24.47■■□□□ 1.51
Sqstm1-201ENSMUST00000015981 3425401B19RikD3Z1D3 1412 aa24.46■■□□□ 1.51
Sqstm1-201ENSMUST00000015981 Pak3Q61036 559 aa24.46■■□□□ 1.51
Sqstm1-201ENSMUST00000015981 Pcf11G3X9Z4 1553 aa24.46■■□□□ 1.51
Sqstm1-201ENSMUST00000015981 Liat1Q810M6 228 aa24.43■■□□□ 1.5
Sqstm1-201ENSMUST00000015981 Vps8Q0P5W1 1427 aa24.43■■□□□ 1.5
Sqstm1-201ENSMUST00000015981 Hdac5Q9Z2V6 1113 aa24.39■■□□□ 1.5
Sqstm1-201ENSMUST00000015981 Il27Q8K3I6 234 aa24.38■■□□□ 1.49
Sqstm1-201ENSMUST00000015981 Lmod2Q3UHZ5 550 aa24.37■■□□□ 1.49
Sqstm1-201ENSMUST00000015981 Ccdc27Q3V036 639 aa24.37■■□□□ 1.49
Sqstm1-201ENSMUST00000015981 Naip5Q9R016 1403 aa24.37■■□□□ 1.49
Sqstm1-201ENSMUST00000015981 Mroh2bQ7M6Y6 1581 aa24.36■■□□□ 1.49
Sqstm1-201ENSMUST00000015981 Upf2A2AT37 1269 aaKnown RBP24.36■■□□□ 1.49
Sqstm1-201ENSMUST00000015981 Camsap1A2AHC3 1581 aa24.34■■□□□ 1.49
Sqstm1-201ENSMUST00000015981 Egfem1Q8C088 590 aa24.34■■□□□ 1.49
Sqstm1-201ENSMUST00000015981 CntlnA2AM05 1397 aa24.33■■□□□ 1.48
Sqstm1-201ENSMUST00000015981 Efcab5A0JP43 1406 aa24.33■■□□□ 1.48
Sqstm1-201ENSMUST00000015981 Ttbk1Q6PCN3 1308 aa24.32■■□□□ 1.48
Sqstm1-201ENSMUST00000015981 Fyco1Q8VDC1 1437 aa24.32■■□□□ 1.48
Sqstm1-201ENSMUST00000015981 Mrs2Q5NCE8 434 aa24.31■■□□□ 1.48
Sqstm1-201ENSMUST00000015981 Crocc2F6XLV1 1638 aa24.31■■□□□ 1.48
Sqstm1-201ENSMUST00000015981 Lmo7E9PYF4 1699 aaKnown RBP24.29■■□□□ 1.48
Sqstm1-201ENSMUST00000015981 Lamc3Q9R0B6 1581 aa24.29■■□□□ 1.48
Sqstm1-201ENSMUST00000015981 Naip2Q9QUK4 1447 aa24.27■■□□□ 1.48
Sqstm1-201ENSMUST00000015981 P3h3Q8CG70 732 aa24.27■■□□□ 1.48
Sqstm1-201ENSMUST00000015981 Atad2bE9Q166 1460 aaKnown RBP24.26■■□□□ 1.47
Sqstm1-201ENSMUST00000015981 Slc4a2P13808 1237 aaKnown RBP24.26■■□□□ 1.47
Sqstm1-201ENSMUST00000015981 Pprc1Q6NZN1 1644 aa24.23■■□□□ 1.47
Sqstm1-201ENSMUST00000015981 Amer1Q7TS75 1132 aa24.2■■□□□ 1.47
Sqstm1-201ENSMUST00000015981 Cul7Q8VE73 1689 aa24.2■■□□□ 1.46
Sqstm1-201ENSMUST00000015981 NrdcQ8BHG1 1161 aa24.19■■□□□ 1.46
Sqstm1-201ENSMUST00000015981 Peg3Q3URU2 1571 aa24.18■■□□□ 1.46
Sqstm1-201ENSMUST00000015981 Gm13695A2AK44 830 aa24.18■■□□□ 1.46
Sqstm1-201ENSMUST00000015981 Ccdc9Q8VC31 543 aaKnown RBP24.18■■□□□ 1.46
Sqstm1-201ENSMUST00000015981 Ipo9Q91YE6 1041 aa24.18■■□□□ 1.46
Sqstm1-201ENSMUST00000015981 Grin2bQ01097 1482 aa24.18■■□□□ 1.46
Sqstm1-201ENSMUST00000015981 Kif15Q6P9L6 1387 aa24.16■■□□□ 1.46
Sqstm1-201ENSMUST00000015981 Ube2uB1AUC4 352 aa24.16■■□□□ 1.46
Sqstm1-201ENSMUST00000015981 Wwc2Q6NXJ0 1187 aa24.15■■□□□ 1.46
Sqstm1-201ENSMUST00000015981 Thoc2B1AZI6 1594 aaKnown RBP24.13■■□□□ 1.45
Sqstm1-201ENSMUST00000015981 Gm7298A0A0N4SVU1 1476 aa24.13■■□□□ 1.45
Sqstm1-201ENSMUST00000015981 Slc4a3P16283 1227 aa24.12■■□□□ 1.45
Sqstm1-201ENSMUST00000015981 Cux1P53564 1515 aa24.12■■□□□ 1.45
Sqstm1-201ENSMUST00000015981 Ncoa1P70365 1447 aa24.12■■□□□ 1.45
Sqstm1-201ENSMUST00000015981 Exoc6Q8R313 802 aa24.11■■□□□ 1.45
Sqstm1-201ENSMUST00000015981 Dennd4bQ3U1Y4 1499 aa24.1■■□□□ 1.45
Sqstm1-201ENSMUST00000015981 Pds5bQ4VA53 1446 aaKnown RBP24.1■■□□□ 1.45
Sqstm1-201ENSMUST00000015981 Gtf3c3Q3TMP1 882 aa24.08■■□□□ 1.45
Sqstm1-201ENSMUST00000015981 A2mQ6GQT1 1474 aa24.08■■□□□ 1.45
Sqstm1-201ENSMUST00000015981 Carmil1Q6EDY6 1374 aa24.06■■□□□ 1.44
Sqstm1-201ENSMUST00000015981 PnisrA2AJT4 805 aaKnown RBP24.05■■□□□ 1.44
Sqstm1-201ENSMUST00000015981 Tcerg1Q8CGF7 1100 aaKnown RBP24.05■■□□□ 1.44
Sqstm1-201ENSMUST00000015981 Hsp90aa1P07901 733 aaKnown RBP24.05■■□□□ 1.44
Sqstm1-201ENSMUST00000015981 Fhod3Q76LL6 1578 aa24.05■■□□□ 1.44
Sqstm1-201ENSMUST00000015981 Frmpd1A2AKB4 1549 aa24.04■■□□□ 1.44
Sqstm1-201ENSMUST00000015981 Gm1043A0A140LJC2 1431 aa24.04■■□□□ 1.44
Sqstm1-201ENSMUST00000015981 Urb2E9Q7L1 1524 aaKnown RBP24.01■■□□□ 1.43
Sqstm1-201ENSMUST00000015981 Irx3P81067 507 aa24■■□□□ 1.43
Sqstm1-201ENSMUST00000015981 Chic2Q9D9G3 165 aa23.99■■□□□ 1.43
Sqstm1-201ENSMUST00000015981 Wdr62Q3U3T8 1523 aa23.98■■□□□ 1.43
Sqstm1-201ENSMUST00000015981 Aebp1Q640N1 1128 aa23.96■■□□□ 1.43
Sqstm1-201ENSMUST00000015981 Ofd1Q80Z25 1017 aa23.95■■□□□ 1.42
Sqstm1-201ENSMUST00000015981 Mphosph9A6H5Y1 991 aa23.95■■□□□ 1.42
Sqstm1-201ENSMUST00000015981 EprsQ8CGC7 1512 aaKnown RBP23.94■■□□□ 1.42
Sqstm1-201ENSMUST00000015981 Arhgap27A2AB59 869 aa23.93■■□□□ 1.42
Sqstm1-201ENSMUST00000015981 Kcnh8P59111 1102 aa23.93■■□□□ 1.42
Sqstm1-201ENSMUST00000015981 L3mbtl2P59178 703 aa23.9■■□□□ 1.42
Retrieved 100 of 22,080 RNA–protein pairs in 27.8 ms