RNA–Protein interactions for RNA: ENSMUST00000001181.12

Col6a2-201, Transcript of Collagen alpha-2(VI) chain, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Col6a2, Length 3,949 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a2-201ENSMUST00000001181 Sin3aQ60520 1274 aaKnown RBP16.39■□□□□ 0.22
Col6a2-201ENSMUST00000001181 Zbtb7cQ8VCZ7 619 aa16.37■□□□□ 0.21
Col6a2-201ENSMUST00000001181 ArxO35085 564 aa16.36■□□□□ 0.21
Col6a2-201ENSMUST00000001181 Hspa5P20029 655 aaKnown RBP16.35■□□□□ 0.21
Col6a2-201ENSMUST00000001181 Ipo9Q91YE6 1041 aa16.33■□□□□ 0.21
Col6a2-201ENSMUST00000001181 Wwc2Q6NXJ0 1187 aa16.32■□□□□ 0.2
Col6a2-201ENSMUST00000001181 CanxP35564 591 aaKnown RBP16.31■□□□□ 0.2
Col6a2-201ENSMUST00000001181 Anp32bQ9EST5 272 aaKnown RBP16.31■□□□□ 0.2
Col6a2-201ENSMUST00000001181 ChgaP26339 463 aaKnown RBP16.3■□□□□ 0.2
Col6a2-201ENSMUST00000001181 Ccer2J3QPU5 274 aa16.29■□□□□ 0.2
Col6a2-201ENSMUST00000001181 Fgd1P52734 960 aa16.28■□□□□ 0.2
Col6a2-201ENSMUST00000001181 Taok2Q6ZQ29 1240 aa16.28■□□□□ 0.2
Col6a2-201ENSMUST00000001181 Gm13697A2AK42 830 aa16.27■□□□□ 0.2
Col6a2-201ENSMUST00000001181 Ofd1Q80Z25 1017 aa16.26■□□□□ 0.19
Col6a2-201ENSMUST00000001181 Cep162Q6ZQ06 1403 aa16.25■□□□□ 0.19
Col6a2-201ENSMUST00000001181 Zbtb4Q5F293 982 aa16.24■□□□□ 0.19
Col6a2-201ENSMUST00000001181 Tcerg1Q8CGF7 1100 aaKnown RBP16.24■□□□□ 0.19
Col6a2-201ENSMUST00000001181 Rpap1Q80TE0 1409 aa16.22■□□□□ 0.19
Col6a2-201ENSMUST00000001181 BlmO88700 1416 aa16.21■□□□□ 0.19
Col6a2-201ENSMUST00000001181 Rtn4Q99P72 1162 aaKnown RBP16.18■□□□□ 0.18
Col6a2-201ENSMUST00000001181 Rad21Q61550 635 aaKnown RBP16.18■□□□□ 0.18
Col6a2-201ENSMUST00000001181 Washc2Q6PGL7 1334 aa16.18■□□□□ 0.18
Col6a2-201ENSMUST00000001181 Kdm5dQ62240 1548 aa16.18■□□□□ 0.18
Col6a2-201ENSMUST00000001181 Setd5Q5XJV7 1441 aa16.16■□□□□ 0.18
Col6a2-201ENSMUST00000001181 Exoc6Q8R313 802 aa16.15■□□□□ 0.18
Col6a2-201ENSMUST00000001181 Smg6P61406 1418 aaKnown RBP16.15■□□□□ 0.18
Col6a2-201ENSMUST00000001181 Chic2Q9D9G3 165 aa16.14■□□□□ 0.18
Col6a2-201ENSMUST00000001181 B4galnt3Q6L8S8 986 aa16.14■□□□□ 0.17
Col6a2-201ENSMUST00000001181 NacadQ5SWP3 1504 aa16.13■□□□□ 0.17
Col6a2-201ENSMUST00000001181 Liat1Q810M6 228 aa16.12■□□□□ 0.17
Col6a2-201ENSMUST00000001181 Ipo4Q8VI75 1082 aa16.12■□□□□ 0.17
Col6a2-201ENSMUST00000001181 Smarca2Q6DIC0 1577 aa16.12■□□□□ 0.17
Col6a2-201ENSMUST00000001181 Spryd3E9Q9B3 442 aa16.12■□□□□ 0.17
Col6a2-201ENSMUST00000001181 Dbr1Q923B1 550 aa16.11■□□□□ 0.17
Col6a2-201ENSMUST00000001181 Rapgef2Q8CHG7 1496 aa16.11■□□□□ 0.17
Col6a2-201ENSMUST00000001181 Npm1Q61937 292 aaKnown RBP16.1■□□□□ 0.17
Col6a2-201ENSMUST00000001181 Kcnh8P59111 1102 aa16.09■□□□□ 0.17
Col6a2-201ENSMUST00000001181 Ncapd3Q6ZQK0 1506 aa16.08■□□□□ 0.16
Col6a2-201ENSMUST00000001181 Znf692Q3U381 531 aa16.07■□□□□ 0.16
Col6a2-201ENSMUST00000001181 Baz1bQ9Z277 1479 aa16.07■□□□□ 0.16
Col6a2-201ENSMUST00000001181 Eea1Q8BL66 1411 aa16.06■□□□□ 0.16
Col6a2-201ENSMUST00000001181 Iqcf3Q9D498 203 aa16.06■□□□□ 0.16
Col6a2-201ENSMUST00000001181 AU015836B2RUM3 263 aa16.02■□□□□ 0.15
Col6a2-201ENSMUST00000001181 Arhgap27A2AB59 869 aa16.01■□□□□ 0.15
Col6a2-201ENSMUST00000001181 Egfem1Q8C088 590 aa16■□□□□ 0.15
Col6a2-201ENSMUST00000001181 Trim30dE9PWL0 497 aa16■□□□□ 0.15
Col6a2-201ENSMUST00000001181 Cecr2E9Q2Z1 1453 aa15.99■□□□□ 0.15
Col6a2-201ENSMUST00000001181 Sart3Q9JLI8 962 aaKnown RBP15.98■□□□□ 0.15
Col6a2-201ENSMUST00000001181 Slc4a2P13808 1237 aaKnown RBP15.97■□□□□ 0.15
Col6a2-201ENSMUST00000001181 Dnai1Q8C0M8 701 aa15.95■□□□□ 0.14
Col6a2-201ENSMUST00000001181 Dnttip2Q8R2M2 758 aaKnown RBP15.95■□□□□ 0.14
Col6a2-201ENSMUST00000001181 Hsp90ab1P11499 724 aaKnown RBP15.94■□□□□ 0.14
Col6a2-201ENSMUST00000001181 Apbb1Q9QXJ1 710 aa15.94■□□□□ 0.14
Col6a2-201ENSMUST00000001181 4930567H17RikQ3V0K5 233 aa15.93■□□□□ 0.14
Col6a2-201ENSMUST00000001181 ScribQ80U72 1612 aa15.91■□□□□ 0.14
Col6a2-201ENSMUST00000001181 Gm13695A2AK44 830 aa15.9■□□□□ 0.14
Col6a2-201ENSMUST00000001181 Synj1Q8CHC4 1574 aa15.89■□□□□ 0.13
Col6a2-201ENSMUST00000001181 Ppm1gQ61074 542 aa15.89■□□□□ 0.13
Col6a2-201ENSMUST00000001181 Pdcl3Q8BVF2 240 aa15.88■□□□□ 0.13
Col6a2-201ENSMUST00000001181 Vsig10D3YX43 558 aa15.86■□□□□ 0.13
Col6a2-201ENSMUST00000001181 Ubl4bQ9CQ84 188 aa15.86■□□□□ 0.13
Col6a2-201ENSMUST00000001181 Ythdc1E9Q5K9 736 aaKnown RBP15.86■□□□□ 0.13
Col6a2-201ENSMUST00000001181 IbspQ61711 324 aa15.86■□□□□ 0.13
Col6a2-201ENSMUST00000001181 Chmp5Q9D7S9 219 aa15.84■□□□□ 0.13
Col6a2-201ENSMUST00000001181 Rgl3Q3UYI5 709 aa15.84■□□□□ 0.13
Col6a2-201ENSMUST00000001181 Arid4bA2CG63 1314 aaKnown RBP15.84■□□□□ 0.13
Col6a2-201ENSMUST00000001181 Fkbp15Q6P9Q6 1216 aaKnown RBP15.83■□□□□ 0.12
Col6a2-201ENSMUST00000001181 Ccdc18Q640L5 1455 aa15.81■□□□□ 0.12
Col6a2-201ENSMUST00000001181 Htatsf1Q8BGC0 757 aa15.8■□□□□ 0.12
Col6a2-201ENSMUST00000001181 Polr3glQ8R0C0 218 aa15.8■□□□□ 0.12
Col6a2-201ENSMUST00000001181 Trim44Q9QXA7 346 aa15.79■□□□□ 0.12
Col6a2-201ENSMUST00000001181 Fmn1Q05860 1466 aa15.79■□□□□ 0.12
Col6a2-201ENSMUST00000001181 Lmod3E9QA62 571 aa15.79■□□□□ 0.12
Col6a2-201ENSMUST00000001181 CftrP26361 1476 aa15.78■□□□□ 0.12
Col6a2-201ENSMUST00000001181 Ttll13A4Q9F6 804 aa15.77■□□□□ 0.12
Col6a2-201ENSMUST00000001181 L3mbtl2P59178 703 aa15.77■□□□□ 0.12
Col6a2-201ENSMUST00000001181 Prdm10Q3UTQ7 1184 aa15.77■□□□□ 0.11
Col6a2-201ENSMUST00000001181 DekQ7TNV0 380 aaKnown RBP15.77■□□□□ 0.11
Col6a2-201ENSMUST00000001181 Mia2Q91ZV0 1396 aa15.77■□□□□ 0.11
Col6a2-201ENSMUST00000001181 CntlnA2AM05 1397 aa15.76■□□□□ 0.11
Col6a2-201ENSMUST00000001181 Gm6268A2A3U9 297 aa15.75■□□□□ 0.11
Col6a2-201ENSMUST00000001181 Grwd1Q810D6 446 aaKnown RBP15.75■□□□□ 0.11
Col6a2-201ENSMUST00000001181 Crybg2B7ZCC2 1516 aa15.75■□□□□ 0.11
Col6a2-201ENSMUST00000001181 Mre11Q61216 706 aa15.75■□□□□ 0.11
Col6a2-201ENSMUST00000001181 EspnQ9ET47 871 aa15.75■□□□□ 0.11
Col6a2-201ENSMUST00000001181 Eif2s2Q99L45 331 aaKnown RBP15.74■□□□□ 0.11
Col6a2-201ENSMUST00000001181 Armcx1Q9CX83 456 aa15.73■□□□□ 0.11
Col6a2-201ENSMUST00000001181 Plcb2A3KGF7 1181 aa15.73■□□□□ 0.11
Col6a2-201ENSMUST00000001181 Zfp777B9EKF4 885 aa15.72■□□□□ 0.11
Col6a2-201ENSMUST00000001181 AampJ3QN89 436 aa15.72■□□□□ 0.11
Col6a2-201ENSMUST00000001181 Gtf2a1Q99PM3 378 aa15.72■□□□□ 0.11
Col6a2-201ENSMUST00000001181 UacaQ8CGB3 1411 aa15.71■□□□□ 0.11
Col6a2-201ENSMUST00000001181 NudcO35685 332 aaKnown RBP15.71■□□□□ 0.1
Col6a2-201ENSMUST00000001181 PnisrA2AJT4 805 aaKnown RBP15.7■□□□□ 0.1
Col6a2-201ENSMUST00000001181 Rangap1P46061 589 aaKnown RBP15.69■□□□□ 0.1
Col6a2-201ENSMUST00000001181 Cc2d2aQ8CFW7 1633 aa15.69■□□□□ 0.1
Col6a2-201ENSMUST00000001181 Arap1Q4LDD4 1452 aa15.69■□□□□ 0.1
Col6a2-201ENSMUST00000001181 Card11Q8CIS0 1159 aa15.69■□□□□ 0.1
Col6a2-201ENSMUST00000001181 Mroh3A0A1D5RM54 893 aa15.67■□□□□ 0.1
Col6a2-201ENSMUST00000001181 Neurod2Q62414 383 aa15.67■□□□□ 0.1
Retrieved 100 of 22,080 RNA–protein pairs in 58.6 ms