RNA–Protein interactions for RNA: ENST00000635750.1

SCN1A-209, Transcript of sodium voltage-gated channel alpha subunit 1, humanhuman

APPRIS P3 TSL 5 BASIC

Gene SCN1A, Length 8,299 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1A-209ENST00000635750 SPANXB1Q9NS25 103 aaPredicted RBP4.25□□□□□ -1.73
SCN1A-209ENST00000635750 INAFM1C9JVW0 142 aa4.25□□□□□ -1.73
SCN1A-209ENST00000635750 CHCHD10Q8WYQ3 142 aaPredicted RBP4.25□□□□□ -1.73
SCN1A-209ENST00000635750 ASPHD1Q5U4P2 390 aa4.25□□□□□ -1.73
SCN1A-209ENST00000635750 TEN1Q86WV5 123 aa4.25□□□□□ -1.73
SCN1A-209ENST00000635750 H3BT86 120 aa4.25□□□□□ -1.73
SCN1A-209ENST00000635750 CLEC2BQ92478 149 aa4.25□□□□□ -1.73
SCN1A-209ENST00000635750 FAM208BQ5VWN6 2430 aa4.25□□□□□ -1.73
SCN1A-209ENST00000635750 ADORA2A-AS1P86434 159 aa4.25□□□□□ -1.73
SCN1A-209ENST00000635750 SIRPDQ9H106 197 aa4.25□□□□□ -1.73
SCN1A-209ENST00000635750 FAM240AA0A1B0GVK7 77 aa4.24□□□□□ -1.73
SCN1A-209ENST00000635750 PLA2G5P39877 138 aa4.24□□□□□ -1.73
SCN1A-209ENST00000635750 THSD7BQ9C0I4 1608 aa4.24□□□□□ -1.73
SCN1A-209ENST00000635750 K7EIM0 57 aa4.24□□□□□ -1.73
SCN1A-209ENST00000635750 E9PLD3 99 aa4.24□□□□□ -1.73
SCN1A-209ENST00000635750 DHRS4-AS1Q9P1J3 65 aa4.24□□□□□ -1.73
SCN1A-209ENST00000635750 ATP5EP56381 51 aaPredicted RBP4.24□□□□□ -1.73
SCN1A-209ENST00000635750 MIAQ16674 131 aa4.24□□□□□ -1.73
SCN1A-209ENST00000635750 Q6ZUT4 128 aa4.24□□□□□ -1.73
SCN1A-209ENST00000635750 MDFICQ9P1T7 246 aa4.24□□□□□ -1.73
SCN1A-209ENST00000635750 NDUFC2-KCTD14E9PQ53 114 aa4.24□□□□□ -1.73
SCN1A-209ENST00000635750 LY6LH3BQJ8 138 aa4.24□□□□□ -1.73
SCN1A-209ENST00000635750 HIST2H2BDQ6DRA6 164 aa4.24□□□□□ -1.73
SCN1A-209ENST00000635750 PROK2Q9HC23 129 aa4.24□□□□□ -1.73
SCN1A-209ENST00000635750 IGLV9-49A0A0B4J1Y8 123 aa4.24□□□□□ -1.73
SCN1A-209ENST00000635750 A6NED7 52 aa4.24□□□□□ -1.73
SCN1A-209ENST00000635750 K7EN84 100 aa4.24□□□□□ -1.73
SCN1A-209ENST00000635750 LOC107984640A0A0U1RRK4 108 aa4.23□□□□□ -1.73
SCN1A-209ENST00000635750 ZNF726P1Q15940 193 aa4.23□□□□□ -1.73
SCN1A-209ENST00000635750 WT1P19544 449 aaPredicted RBP4.23□□□□□ -1.73
SCN1A-209ENST00000635750 SYCNQ0VAF6 134 aa4.23□□□□□ -1.73
SCN1A-209ENST00000635750 RNF185Q96GF1 192 aa4.23□□□□□ -1.73
SCN1A-209ENST00000635750 U3KQA8 63 aa4.23□□□□□ -1.73
SCN1A-209ENST00000635750 TECTAO75443 2155 aa4.23□□□□□ -1.73
SCN1A-209ENST00000635750 NDUFC1O43677 76 aa4.23□□□□□ -1.73
SCN1A-209ENST00000635750 C10orf25Q5T742 122 aa4.23□□□□□ -1.73
SCN1A-209ENST00000635750 ATP5EP2Q5VTU8 51 aa4.23□□□□□ -1.73
SCN1A-209ENST00000635750 Q8N976 141 aa4.23□□□□□ -1.73
SCN1A-209ENST00000635750 A0A0J9YX75 114 aa4.23□□□□□ -1.73
SCN1A-209ENST00000635750 C1orf158Q8N1D5 194 aa4.23□□□□□ -1.73
SCN1A-209ENST00000635750 MLST8Q9BVC4 326 aa4.23□□□□□ -1.73
SCN1A-209ENST00000635750 ZNF503-AS2A6NEH8 195 aa4.23□□□□□ -1.73
SCN1A-209ENST00000635750 ODF3Q96PU9 254 aa4.22□□□□□ -1.73
SCN1A-209ENST00000635750 PIK3CD-AS1Q5SR53 167 aa4.22□□□□□ -1.73
SCN1A-209ENST00000635750 LINC00643Q86TS7 51 aa4.22□□□□□ -1.73
SCN1A-209ENST00000635750 PTPRSQ13332 1948 aa4.22□□□□□ -1.73
SCN1A-209ENST00000635750 PCNX3Q9H6A9 2034 aa4.22□□□□□ -1.73
SCN1A-209ENST00000635750 IGHV4-30-4P0DP06 118 aa4.22□□□□□ -1.73
SCN1A-209ENST00000635750 IGHV4-31P0DP07 118 aa4.22□□□□□ -1.73
SCN1A-209ENST00000635750 IGFL2Q6UWQ7 119 aa4.22□□□□□ -1.73
SCN1A-209ENST00000635750 RITA1Q96K30 269 aa4.22□□□□□ -1.73
SCN1A-209ENST00000635750 PLAC8L1A1L4L8 177 aa4.22□□□□□ -1.73
SCN1A-209ENST00000635750 CRIPAKQ8N1N5 446 aa4.22□□□□□ -1.73
SCN1A-209ENST00000635750 HIGD1BQ9P298 99 aa4.22□□□□□ -1.73
SCN1A-209ENST00000635750 Q6YL49 198 aa4.22□□□□□ -1.73
SCN1A-209ENST00000635750 SONP18583 2426 aaKnown RBP4.22□□□□□ -1.73
SCN1A-209ENST00000635750 A6NDX4 124 aa4.22□□□□□ -1.73
SCN1A-209ENST00000635750 G3V4G9 280 aa4.22□□□□□ -1.73
SCN1A-209ENST00000635750 X6R8D5 127 aa4.22□□□□□ -1.73
SCN1A-209ENST00000635750 COL4A6Q14031 1691 aa4.22□□□□□ -1.73
SCN1A-209ENST00000635750 TNFRSF13BO14836 293 aaPredicted RBP4.21□□□□□ -1.73
SCN1A-209ENST00000635750 RPL28P46779 137 aaKnown RBP4.21□□□□□ -1.73
SCN1A-209ENST00000635750 CTRLP40313 264 aa4.21□□□□□ -1.74
SCN1A-209ENST00000635750 PPDPFQ9H3Y8 114 aa4.21□□□□□ -1.74
SCN1A-209ENST00000635750 IGLV4-69A0A075B6H9 119 aa4.21□□□□□ -1.74
SCN1A-209ENST00000635750 CCKP06307 115 aa4.21□□□□□ -1.74
SCN1A-209ENST00000635750 CIRBP-AS1Q8TBR5 109 aa4.21□□□□□ -1.74
SCN1A-209ENST00000635750 PRORYQ9H606 182 aa4.21□□□□□ -1.74
SCN1A-209ENST00000635750 RETNQ9HD89 108 aa4.21□□□□□ -1.74
SCN1A-209ENST00000635750 IBA57-AS1B1ANH7 110 aa4.21□□□□□ -1.74
SCN1A-209ENST00000635750 ZNF843Q8N446 348 aa4.21□□□□□ -1.74
SCN1A-209ENST00000635750 C3orf84H3BNL1 204 aa4.2□□□□□ -1.74
SCN1A-209ENST00000635750 IGF1P05019 195 aa4.2□□□□□ -1.74
SCN1A-209ENST00000635750 IGKV2-28A0A075B6P5 120 aa4.2□□□□□ -1.74
SCN1A-209ENST00000635750 IGKV2D-28P01615 120 aa4.2□□□□□ -1.74
SCN1A-209ENST00000635750 KPRPQ5T749 579 aaPredicted RBP4.2□□□□□ -1.74
SCN1A-209ENST00000635750 Q6ZTI0 123 aa4.2□□□□□ -1.74
SCN1A-209ENST00000635750 IGLV5-52A0A0A0MRZ9 124 aa4.2□□□□□ -1.74
SCN1A-209ENST00000635750 TRBV6-8A0A0A6YYG3 113 aa4.2□□□□□ -1.74
SCN1A-209ENST00000635750 ADCYAP1P18509 176 aa4.2□□□□□ -1.74
SCN1A-209ENST00000635750 MUC6Q6W4X9 2439 aa4.2□□□□□ -1.74
SCN1A-209ENST00000635750 C20orf203Q8NBC4 194 aa4.2□□□□□ -1.74
SCN1A-209ENST00000635750 COL4A1P02462 1669 aa4.2□□□□□ -1.74
SCN1A-209ENST00000635750 M0R378 163 aa4.2□□□□□ -1.74
SCN1A-209ENST00000635750 LY6G6DO95868 133 aa4.2□□□□□ -1.74
SCN1A-209ENST00000635750 DEFB114Q30KQ6 69 aa4.2□□□□□ -1.74
SCN1A-209ENST00000635750 SCXQ7RTU7 201 aa4.2□□□□□ -1.74
SCN1A-209ENST00000635750 A0A1B0GXF2 115 aa4.19□□□□□ -1.74
SCN1A-209ENST00000635750 ENHOQ6UWT2 76 aa4.19□□□□□ -1.74
SCN1A-209ENST00000635750 C11orf53Q8IXP5 236 aa4.19□□□□□ -1.74
SCN1A-209ENST00000635750 LINC00337Q8N6G1 96 aa4.19□□□□□ -1.74
SCN1A-209ENST00000635750 MSRB1Q9NZV6 116 aa4.19□□□□□ -1.74
SCN1A-209ENST00000635750 PTPN13Q12923 2485 aa4.19□□□□□ -1.74
SCN1A-209ENST00000635750 C19orf71A6NCJ1 209 aa4.19□□□□□ -1.74
SCN1A-209ENST00000635750 PRAC2D3DTV9 90 aa4.19□□□□□ -1.74
SCN1A-209ENST00000635750 ABCA2Q9BZC7 2435 aa4.19□□□□□ -1.74
SCN1A-209ENST00000635750 TDRG1Q3Y452 100 aa4.19□□□□□ -1.74
SCN1A-209ENST00000635750 SDIM1Q6ZPB5 146 aa4.19□□□□□ -1.74
SCN1A-209ENST00000635750 C20orf197Q8N268 126 aa4.19□□□□□ -1.74
SCN1A-209ENST00000635750 SPRNQ5BIV9 151 aa4.19□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 60.8 ms