RNA–Protein interactions for RNA: ENST00000622875.4

EBF1-211, Transcript of early B cell factor 1, humanhuman

TSL 5 BASIC

Gene EBF1, Length 4,430 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EBF1-211ENST00000622875 TRAV12-3A0A0B4J271 114 aa4.3□□□□□ -1.72
EBF1-211ENST00000622875 Q96M66 194 aa4.3□□□□□ -1.72
EBF1-211ENST00000622875 HUWE1Q7Z6Z7 4374 aaKnown RBP4.3□□□□□ -1.72
EBF1-211ENST00000622875 TEX49A0A1B0GTD5 131 aa4.3□□□□□ -1.72
EBF1-211ENST00000622875 C1orf229Q6ZS94 237 aaPredicted RBP4.3□□□□□ -1.72
EBF1-211ENST00000622875 SCXQ7RTU7 201 aa4.3□□□□□ -1.72
EBF1-211ENST00000622875 VN1R4Q7Z5H5 301 aa4.3□□□□□ -1.72
EBF1-211ENST00000622875 PHLDA1Q8WV24 401 aaPredicted RBP4.3□□□□□ -1.72
EBF1-211ENST00000622875 TMEM141Q96I45 108 aa4.3□□□□□ -1.72
EBF1-211ENST00000622875 TRBV10-3A0A0K0K1G6 114 aa4.3□□□□□ -1.72
EBF1-211ENST00000622875 CLPSL1A2RUU4 121 aa4.3□□□□□ -1.72
EBF1-211ENST00000622875 SH2D1AO60880 128 aa4.3□□□□□ -1.72
EBF1-211ENST00000622875 CASC2Q6XLA1 102 aa4.3□□□□□ -1.72
EBF1-211ENST00000622875 C7orf65Q6ZTY9 151 aa4.3□□□□□ -1.72
EBF1-211ENST00000622875 PRNTQ86SH4 94 aa4.3□□□□□ -1.72
EBF1-211ENST00000622875 ODF3Q96PU9 254 aa4.3□□□□□ -1.72
EBF1-211ENST00000622875 CCL13Q99616 98 aa4.3□□□□□ -1.72
EBF1-211ENST00000622875 MRPL35Q9NZE8 188 aaKnown RBP4.3□□□□□ -1.72
EBF1-211ENST00000622875 PDE6GP18545 87 aa4.29□□□□□ -1.72
EBF1-211ENST00000622875 LINC00310P59036 64 aa4.29□□□□□ -1.72
EBF1-211ENST00000622875 ZNF503Q96F45 646 aa4.29□□□□□ -1.72
EBF1-211ENST00000622875 PHLDA3Q9Y5J5 127 aa4.29□□□□□ -1.72
EBF1-211ENST00000622875 NDUFB1O75438 58 aa4.29□□□□□ -1.72
EBF1-211ENST00000622875 ZNF134P52741 427 aa4.29□□□□□ -1.72
EBF1-211ENST00000622875 CRYBA2P53672 197 aa4.29□□□□□ -1.72
EBF1-211ENST00000622875 C19orf54Q5BKX5 351 aa4.29□□□□□ -1.72
EBF1-211ENST00000622875 LEPROTO15243 131 aa4.29□□□□□ -1.72
EBF1-211ENST00000622875 KRTAP9-2Q9BYQ4 174 aa4.29□□□□□ -1.72
EBF1-211ENST00000622875 H0YGX0 51 aa4.28□□□□□ -1.72
EBF1-211ENST00000622875 COL8A2P25067 703 aa4.28□□□□□ -1.72
EBF1-211ENST00000622875 MORN5Q5VZ52 161 aa4.28□□□□□ -1.72
EBF1-211ENST00000622875 NRACQ8N912 160 aa4.28□□□□□ -1.72
EBF1-211ENST00000622875 CLEC2BQ92478 149 aa4.28□□□□□ -1.72
EBF1-211ENST00000622875 LIMD2Q9BT23 127 aa4.28□□□□□ -1.72
EBF1-211ENST00000622875 RBM12B-AS1Q9P1G2 102 aa4.28□□□□□ -1.72
EBF1-211ENST00000622875 MUC4Q99102 2169 aa4.28□□□□□ -1.72
EBF1-211ENST00000622875 IGKV3D-7A0A0C4DH55 119 aa4.28□□□□□ -1.72
EBF1-211ENST00000622875 LINC01590Q5TEZ4 76 aa4.28□□□□□ -1.72
EBF1-211ENST00000622875 Q6ZSR3 168 aa4.28□□□□□ -1.72
EBF1-211ENST00000622875 F8WEM9 126 aa4.28□□□□□ -1.72
EBF1-211ENST00000622875 SPRY2O43597 315 aa4.28□□□□□ -1.72
EBF1-211ENST00000622875 LHBP01229 141 aa4.28□□□□□ -1.72
EBF1-211ENST00000622875 UBE2E2Q96LR5 201 aa4.28□□□□□ -1.72
EBF1-211ENST00000622875 CRPP02741 224 aa4.28□□□□□ -1.72
EBF1-211ENST00000622875 CCKP06307 115 aa4.28□□□□□ -1.72
EBF1-211ENST00000622875 MIFP14174 115 aa4.28□□□□□ -1.72
EBF1-211ENST00000622875 Q5XG85 94 aa4.28□□□□□ -1.72
EBF1-211ENST00000622875 ATP11AUNQ6ZP68 121 aa4.28□□□□□ -1.72
EBF1-211ENST00000622875 IGLV3-16A0A075B6K0 115 aa4.27□□□□□ -1.73
EBF1-211ENST00000622875 TRBV7-3A0A075B6L6 115 aa4.27□□□□□ -1.73
EBF1-211ENST00000622875 A6NED7 52 aa4.27□□□□□ -1.73
EBF1-211ENST00000622875 CHKB-CPT1BH3BT56 60 aa4.27□□□□□ -1.73
EBF1-211ENST00000622875 FOXS1O43638 330 aa4.27□□□□□ -1.73
EBF1-211ENST00000622875 PROK1P58294 105 aa4.27□□□□□ -1.73
EBF1-211ENST00000622875 GPHA2Q96T91 129 aa4.27□□□□□ -1.73
EBF1-211ENST00000622875 TMEM223A0PJW6 202 aa4.27□□□□□ -1.73
EBF1-211ENST00000622875 MRPL33O75394 65 aaKnown RBP4.27□□□□□ -1.73
EBF1-211ENST00000622875 SS18Q15532 418 aa4.27□□□□□ -1.73
EBF1-211ENST00000622875 ZNF497Q6ZNH5 498 aa4.27□□□□□ -1.73
EBF1-211ENST00000622875 LTAP01374 205 aa4.27□□□□□ -1.73
EBF1-211ENST00000622875 PRR14LQ5THK1 2151 aa4.27□□□□□ -1.73
EBF1-211ENST00000622875 A0A1B0GXF2 115 aa4.26□□□□□ -1.73
EBF1-211ENST00000622875 UBE2D1P51668 147 aa4.26□□□□□ -1.73
EBF1-211ENST00000622875 PIK3CD-AS1Q5SR53 167 aa4.26□□□□□ -1.73
EBF1-211ENST00000622875 Q6ZRM9 215 aa4.26□□□□□ -1.73
EBF1-211ENST00000622875 CYP4F30PQ9H0H9 118 aa4.26□□□□□ -1.73
EBF1-211ENST00000622875 IGHV1-69DA0A0B4J2H0 117 aa4.26□□□□□ -1.73
EBF1-211ENST00000622875 NANOS2P60321 138 aaKnown RBP4.26□□□□□ -1.73
EBF1-211ENST00000622875 SDIM1Q6ZPB5 146 aa4.26□□□□□ -1.73
EBF1-211ENST00000622875 LINC00173Q6ZV60 143 aa4.26□□□□□ -1.73
EBF1-211ENST00000622875 UPK3BQ9BT76 320 aa4.26□□□□□ -1.73
EBF1-211ENST00000622875 BPESC1Q9GZL8 116 aa4.26□□□□□ -1.73
EBF1-211ENST00000622875 MSMBP08118 114 aa4.26□□□□□ -1.73
EBF1-211ENST00000622875 CCL3P10147 92 aa4.26□□□□□ -1.73
EBF1-211ENST00000622875 DNAH6Q9C0G6 4158 aa4.26□□□□□ -1.73
EBF1-211ENST00000622875 LYPD3O95274 346 aa4.26□□□□□ -1.73
EBF1-211ENST00000622875 PRM2P04554 102 aa4.26□□□□□ -1.73
EBF1-211ENST00000622875 NEXN-AS1Q8NBZ9 246 aa4.26□□□□□ -1.73
EBF1-211ENST00000622875 HHLA3Q9XRX5 114 aa4.26□□□□□ -1.73
EBF1-211ENST00000622875 OXTP01178 125 aa4.25□□□□□ -1.73
EBF1-211ENST00000622875 BGLAPP02818 100 aa4.25□□□□□ -1.73
EBF1-211ENST00000622875 DEFB121Q5J5C9 76 aa4.25□□□□□ -1.73
EBF1-211ENST00000622875 MIR17HGQ75NE6 70 aa4.25□□□□□ -1.73
EBF1-211ENST00000622875 C2orf48Q96LS8 159 aa4.25□□□□□ -1.73
EBF1-211ENST00000622875 HSPG2P98160 4391 aa4.25□□□□□ -1.73
EBF1-211ENST00000622875 IGHV3-9P01782 118 aa4.25□□□□□ -1.73
EBF1-211ENST00000622875 CCL1P22362 96 aa4.25□□□□□ -1.73
EBF1-211ENST00000622875 EGFEM1PQ0D2K5 195 aa4.25□□□□□ -1.73
EBF1-211ENST00000622875 C9orf139Q6ZV77 190 aa4.25□□□□□ -1.73
EBF1-211ENST00000622875 FXYD5Q96DB9 178 aa4.25□□□□□ -1.73
EBF1-211ENST00000622875 IGHV3-33P01772 117 aa4.25□□□□□ -1.73
EBF1-211ENST00000622875 CD28P10747 220 aa4.25□□□□□ -1.73
EBF1-211ENST00000622875 FAM74A4Q5TZK3 123 aa4.25□□□□□ -1.73
EBF1-211ENST00000622875 DNAH11Q96DT5 4516 aa4.25□□□□□ -1.73
EBF1-211ENST00000622875 SDHAF1A6NFY7 115 aa4.24□□□□□ -1.73
EBF1-211ENST00000622875 C12orf77C9JDV5 145 aa4.24□□□□□ -1.73
EBF1-211ENST00000622875 LST1O00453 97 aa4.24□□□□□ -1.73
EBF1-211ENST00000622875 AVPP01185 164 aa4.24□□□□□ -1.73
EBF1-211ENST00000622875 LYPD1Q8N2G4 141 aa4.24□□□□□ -1.73
EBF1-211ENST00000622875 EFNA2O43921 213 aa4.24□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 45.3 ms