RNA–Protein interactions for RNA: ENST00000611571.4

MUC1-223, Transcript of mucin 1, cell surface associated, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene MUC1, Length 4,170 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MUC1-223ENST00000611571 ADAMTS20P59510 1910 aa10.43□□□□□ -0.74
MUC1-223ENST00000611571 TRAV26-1A0A087WT03 109 aa10.43□□□□□ -0.74
MUC1-223ENST00000611571 BAALC-AS2P0C853 105 aa10.43□□□□□ -0.74
MUC1-223ENST00000611571 HERVK_113P63121 156 aa10.43□□□□□ -0.74
MUC1-223ENST00000611571 EDN2P20800 178 aa10.42□□□□□ -0.74
MUC1-223ENST00000611571 NEXN-AS1Q8NBZ9 246 aa10.42□□□□□ -0.74
MUC1-223ENST00000611571 AKAP13Q12802 2813 aa10.42□□□□□ -0.74
MUC1-223ENST00000611571 TM2D2Q9BX73 214 aa10.42□□□□□ -0.74
MUC1-223ENST00000611571 CCL24O00175 119 aa10.42□□□□□ -0.74
MUC1-223ENST00000611571 MT-ATP8P03928 68 aa10.42□□□□□ -0.74
MUC1-223ENST00000611571 ANGP03950 147 aaKnown RBP10.42□□□□□ -0.74
MUC1-223ENST00000611571 TIMM17AQ99595 171 aa10.42□□□□□ -0.74
MUC1-223ENST00000611571 DEFB4AO15263 64 aa10.41□□□□□ -0.74
MUC1-223ENST00000611571 MUC4Q99102 2169 aa10.41□□□□□ -0.74
MUC1-223ENST00000611571 BOD1L1Q8NFC6 3051 aa10.41□□□□□ -0.74
MUC1-223ENST00000611571 NRACQ8N912 160 aa10.41□□□□□ -0.74
MUC1-223ENST00000611571 ICOSQ9Y6W8 199 aa10.41□□□□□ -0.74
MUC1-223ENST00000611571 Q6ZUT4 128 aa10.41□□□□□ -0.74
MUC1-223ENST00000611571 A0A096LNJ9 63 aa10.4□□□□□ -0.74
MUC1-223ENST00000611571 GPHB5Q86YW7 130 aa10.4□□□□□ -0.74
MUC1-223ENST00000611571 SPANXB1Q9NS25 103 aaPredicted RBP10.4□□□□□ -0.74
MUC1-223ENST00000611571 U3KQK5 164 aa10.4□□□□□ -0.74
MUC1-223ENST00000611571 FSTL3O95633 263 aa10.4□□□□□ -0.74
MUC1-223ENST00000611571 HAMPP81172 84 aa10.4□□□□□ -0.75
MUC1-223ENST00000611571 A6NDX4 124 aa10.39□□□□□ -0.75
MUC1-223ENST00000611571 TEX49A0A1B0GTD5 131 aa10.39□□□□□ -0.75
MUC1-223ENST00000611571 HHLA3Q9XRX5 114 aa10.39□□□□□ -0.75
MUC1-223ENST00000611571 TNFRSF13BO14836 293 aaPredicted RBP10.38□□□□□ -0.75
MUC1-223ENST00000611571 CDKN2A-AS1Q9UH64 79 aa10.38□□□□□ -0.75
MUC1-223ENST00000611571 A0A1W2PPR1 153 aa10.38□□□□□ -0.75
MUC1-223ENST00000611571 RNASE3P12724 160 aaKnown RBP10.38□□□□□ -0.75
MUC1-223ENST00000611571 EBI3Q14213 229 aa10.38□□□□□ -0.75
MUC1-223ENST00000611571 MRPS12O15235 138 aaKnown RBP10.38□□□□□ -0.75
MUC1-223ENST00000611571 SPANXA1Q9NS26 97 aa10.38□□□□□ -0.75
MUC1-223ENST00000611571 SOCS3O14543 225 aa10.37□□□□□ -0.75
MUC1-223ENST00000611571 Q9HAA7 133 aa10.37□□□□□ -0.75
MUC1-223ENST00000611571 CLPSL1A2RUU4 121 aa10.37□□□□□ -0.75
MUC1-223ENST00000611571 K7EMT4 169 aa10.37□□□□□ -0.75
MUC1-223ENST00000611571 SND1-IT1Q9HBX3 110 aa10.37□□□□□ -0.75
MUC1-223ENST00000611571 F8W735 103 aaPredicted RBP10.37□□□□□ -0.75
MUC1-223ENST00000611571 INAFM2P0DMQ5 153 aa10.37□□□□□ -0.75
MUC1-223ENST00000611571 DAD1P61803 113 aa10.36□□□□□ -0.75
MUC1-223ENST00000611571 F8P00451 2351 aa10.36□□□□□ -0.75
MUC1-223ENST00000611571 IGKV3D-7A0A0C4DH55 119 aa10.36□□□□□ -0.75
MUC1-223ENST00000611571 A0A0J9YXY3 114 aa10.36□□□□□ -0.75
MUC1-223ENST00000611571 CRLF1O75462 422 aa10.36□□□□□ -0.75
MUC1-223ENST00000611571 COL5A1P20908 1838 aaPredicted RBP10.36□□□□□ -0.75
MUC1-223ENST00000611571 IGHV4-4A0A075B6R2 117 aa10.36□□□□□ -0.75
MUC1-223ENST00000611571 TRAV4A0A0B4J268 109 aa10.36□□□□□ -0.75
MUC1-223ENST00000611571 SMIM20Q8N5G0 67 aa10.36□□□□□ -0.75
MUC1-223ENST00000611571 SRSF2Q01130 221 aaKnown RBP10.36□□□□□ -0.75
MUC1-223ENST00000611571 VSIG2Q96IQ7 327 aa10.36□□□□□ -0.75
MUC1-223ENST00000611571 MYO15AQ9UKN7 3530 aa10.35□□□□□ -0.75
MUC1-223ENST00000611571 CFAP47Q6ZTR5 3102 aa10.35□□□□□ -0.75
MUC1-223ENST00000611571 Q6ZTI0 123 aa10.35□□□□□ -0.75
MUC1-223ENST00000611571 NFE4Q86UQ8 179 aa10.35□□□□□ -0.75
MUC1-223ENST00000611571 Q8N6K4 173 aa10.35□□□□□ -0.75
MUC1-223ENST00000611571 TRBV7-3A0A075B6L6 115 aa10.35□□□□□ -0.75
MUC1-223ENST00000611571 CMC4P56277 68 aaPredicted RBP10.35□□□□□ -0.75
MUC1-223ENST00000611571 MRGPRG-AS1Q2M3A8 158 aa10.35□□□□□ -0.75
MUC1-223ENST00000611571 ATRQ13535 2644 aa10.35□□□□□ -0.75
MUC1-223ENST00000611571 J3QLI3 93 aa10.35□□□□□ -0.75
MUC1-223ENST00000611571 ZNF22P17026 224 aaPredicted RBP10.35□□□□□ -0.75
MUC1-223ENST00000611571 C11orf71Q6IPW1 123 aa10.35□□□□□ -0.75
MUC1-223ENST00000611571 SLC25A29Q8N8R3 303 aa10.35□□□□□ -0.75
MUC1-223ENST00000611571 IGHV1-58A0A0C4DH39 117 aa10.34□□□□□ -0.75
MUC1-223ENST00000611571 LGALS9O00182 355 aa10.34□□□□□ -0.75
MUC1-223ENST00000611571 LINC00467Q9BRT7 94 aa10.34□□□□□ -0.75
MUC1-223ENST00000611571 RNF183Q96D59 192 aa10.34□□□□□ -0.75
MUC1-223ENST00000611571 ATP5G1P05496 136 aa10.33□□□□□ -0.76
MUC1-223ENST00000611571 GYPEP15421 78 aa10.33□□□□□ -0.76
MUC1-223ENST00000611571 K7EQG2 157 aa10.33□□□□□ -0.76
MUC1-223ENST00000611571 M0QY20 66 aa10.33□□□□□ -0.76
MUC1-223ENST00000611571 HECTD1Q9ULT8 2610 aa10.33□□□□□ -0.76
MUC1-223ENST00000611571 IGLV4-3A0A075B6K6 122 aa10.33□□□□□ -0.76
MUC1-223ENST00000611571 TRAV13-2A0A0B4J235 113 aa10.33□□□□□ -0.76
MUC1-223ENST00000611571 HIST2H2BCQ6DN03 193 aa10.33□□□□□ -0.76
MUC1-223ENST00000611571 MIR7-3HGQ8N6C7 128 aa10.33□□□□□ -0.76
MUC1-223ENST00000611571 WFDC11Q8NEX6 87 aa10.33□□□□□ -0.76
MUC1-223ENST00000611571 FAM236AA0A1B0GUQ0 79 aa10.32□□□□□ -0.76
MUC1-223ENST00000611571 FAM236BA0A1B0GV22 79 aa10.32□□□□□ -0.76
MUC1-223ENST00000611571 IGHG4P01861 327 aa10.32□□□□□ -0.76
MUC1-223ENST00000611571 MED14OSP0DP75 135 aa10.32□□□□□ -0.76
MUC1-223ENST00000611571 C18orf65Q6ZTR6 163 aa10.32□□□□□ -0.76
MUC1-223ENST00000611571 AVPP01185 164 aa10.32□□□□□ -0.76
MUC1-223ENST00000611571 DNAJC30Q96LL9 226 aa10.32□□□□□ -0.76
MUC1-223ENST00000611571 CITED2Q99967 270 aaPredicted RBP10.32□□□□□ -0.76
MUC1-223ENST00000611571 RAI1Q7Z5J4 1906 aaPredicted RBP10.31□□□□□ -0.76
MUC1-223ENST00000611571 K7EQD1 137 aa10.31□□□□□ -0.76
MUC1-223ENST00000611571 LECT2O14960 151 aa10.31□□□□□ -0.76
MUC1-223ENST00000611571 PIK3CD-AS1Q5SR53 167 aa10.3□□□□□ -0.76
MUC1-223ENST00000611571 TRAV25A0A0B4J276 109 aa10.3□□□□□ -0.76
MUC1-223ENST00000611571 TRBV10-2A0A0K0K1G8 114 aa10.3□□□□□ -0.76
MUC1-223ENST00000611571 DEFB121Q5J5C9 76 aa10.3□□□□□ -0.76
MUC1-223ENST00000611571 ZNF561-AS1K7EIQ3 104 aa10.3□□□□□ -0.76
MUC1-223ENST00000611571 MAP6D1Q9H9H5 199 aa10.3□□□□□ -0.76
MUC1-223ENST00000611571 PIFOQ8TCI5 191 aa10.29□□□□□ -0.76
MUC1-223ENST00000611571 ZNF580Q9UK33 172 aa10.29□□□□□ -0.76
MUC1-223ENST00000611571 TRIAP1O43715 76 aa10.29□□□□□ -0.76
MUC1-223ENST00000611571 DEFB113Q30KQ7 82 aa10.29□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 85.4 ms