RNA–Protein interactions for RNA: ENST00000602619.1

SGMS1-207, Transcript of sphingomyelin synthase 1, humanhuman

TSL 3

Gene SGMS1, Length 461 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGMS1-207ENST00000602619 SBSPONQ8IVN8 264 aa1.28□□□□□ -2.2
SGMS1-207ENST00000602619 MYOZ3Q8TDC0 251 aa1.28□□□□□ -2.2
SGMS1-207ENST00000602619 PPP1R1CQ8WVI7 109 aa1.28□□□□□ -2.2
SGMS1-207ENST00000602619 WFDC10AQ9H1F0 79 aa1.28□□□□□ -2.2
SGMS1-207ENST00000602619 DPH3P1Q9H4G8 78 aa1.28□□□□□ -2.2
SGMS1-207ENST00000602619 FAIMQ9NVQ4 179 aa1.28□□□□□ -2.2
SGMS1-207ENST00000602619 C5P01031 1676 aa1.28□□□□□ -2.2
SGMS1-207ENST00000602619 ZNF142P52746 1687 aaPredicted RBP1.28□□□□□ -2.2
SGMS1-207ENST00000602619 COL4A2P08572 1712 aa1.28□□□□□ -2.2
SGMS1-207ENST00000602619 ARAP2Q8WZ64 1704 aa1.28□□□□□ -2.2
SGMS1-207ENST00000602619 LTN1O94822 1766 aa1.28□□□□□ -2.2
SGMS1-207ENST00000602619 ANAPC1Q9H1A4 1944 aa1.28□□□□□ -2.2
SGMS1-207ENST00000602619 AKAP11Q9UKA4 1901 aa1.28□□□□□ -2.2
SGMS1-207ENST00000602619 CCDC88CQ9P219 2028 aa1.28□□□□□ -2.2
SGMS1-207ENST00000602619 ZFHX2Q9C0A1 2572 aaPredicted RBP1.28□□□□□ -2.2
SGMS1-207ENST00000602619 ARHGAP32A7KAX9 2087 aa1.27□□□□□ -2.21
SGMS1-207ENST00000602619 HEATR5BQ9P2D3 2071 aa1.27□□□□□ -2.21
SGMS1-207ENST00000602619 BCORQ6W2J9 1755 aa1.27□□□□□ -2.21
SGMS1-207ENST00000602619 TNRC6CQ9HCJ0 1690 aaKnown RBP1.27□□□□□ -2.21
SGMS1-207ENST00000602619 CICQ96RK0 1608 aaPredicted RBP1.27□□□□□ -2.21
SGMS1-207ENST00000602619 TRAV13-2A0A0B4J235 113 aa1.27□□□□□ -2.21
SGMS1-207ENST00000602619 TRAV12-3A0A0B4J271 114 aa1.27□□□□□ -2.21
SGMS1-207ENST00000602619 CCKP06307 115 aa1.27□□□□□ -2.21
SGMS1-207ENST00000602619 PDE6GP18545 87 aa1.27□□□□□ -2.21
SGMS1-207ENST00000602619 SNCAP37840 140 aa1.27□□□□□ -2.21
SGMS1-207ENST00000602619 KRTDAPP60985 99 aa1.27□□□□□ -2.21
SGMS1-207ENST00000602619 CCL8P80075 99 aa1.27□□□□□ -2.21
SGMS1-207ENST00000602619 Q6ZRN7 208 aaPredicted RBP1.27□□□□□ -2.21
SGMS1-207ENST00000602619 CYP2G1PQ6ZSU1 146 aa1.27□□□□□ -2.21
SGMS1-207ENST00000602619 DEFB107AQ8IZN7 70 aa1.27□□□□□ -2.21
SGMS1-207ENST00000602619 IFI27L1Q96BM0 104 aa1.27□□□□□ -2.21
SGMS1-207ENST00000602619 LIMD2Q9BT23 127 aa1.27□□□□□ -2.21
SGMS1-207ENST00000602619 DOCK2Q92608 1830 aa1.26□□□□□ -2.21
SGMS1-207ENST00000602619 COL24A1Q17RW2 1714 aa1.26□□□□□ -2.21
SGMS1-207ENST00000602619 TEX49A0A1B0GTD5 131 aa1.26□□□□□ -2.21
SGMS1-207ENST00000602619 IGLV3-1P01715 115 aa1.26□□□□□ -2.21
SGMS1-207ENST00000602619 IL9P15248 144 aa1.26□□□□□ -2.21
SGMS1-207ENST00000602619 ZNF818PQ6ZRF7 136 aa1.26□□□□□ -2.21
SGMS1-207ENST00000602619 ZCCHC13Q8WW36 166 aaKnown RBP1.26□□□□□ -2.21
SGMS1-207ENST00000602619 S100ZQ8WXG8 99 aa1.26□□□□□ -2.21
SGMS1-207ENST00000602619 ODF3Q96PU9 254 aa1.26□□□□□ -2.21
SGMS1-207ENST00000602619 VAMP8Q9BV40 100 aa1.26□□□□□ -2.21
SGMS1-207ENST00000602619 CYP4F30PQ9H0H9 118 aa1.26□□□□□ -2.21
SGMS1-207ENST00000602619 STRCQ7RTU9 1775 aa1.26□□□□□ -2.21
SGMS1-207ENST00000602619 DLEC1Q9Y238 1755 aa1.26□□□□□ -2.21
SGMS1-207ENST00000602619 NHSL1Q5SYE7 1610 aa1.26□□□□□ -2.21
SGMS1-207ENST00000602619 MYO9BQ13459 2157 aa1.25□□□□□ -2.21
SGMS1-207ENST00000602619 AFDNP55196 1824 aaKnown RBP1.25□□□□□ -2.21
SGMS1-207ENST00000602619 FOCADQ5VW36 1801 aa1.25□□□□□ -2.21
SGMS1-207ENST00000602619 LOC110117498A0A087WWA1 95 aa1.25□□□□□ -2.21
SGMS1-207ENST00000602619 RBAKDNA6NC62 111 aa1.25□□□□□ -2.21
SGMS1-207ENST00000602619 NAP1L6A6NFF2 107 aa1.25□□□□□ -2.21
SGMS1-207ENST00000602619 HCG22E2RYF7 251 aa1.25□□□□□ -2.21
SGMS1-207ENST00000602619 SIX6O95475 246 aa1.25□□□□□ -2.21
SGMS1-207ENST00000602619 TFF1P04155 84 aa1.25□□□□□ -2.21
SGMS1-207ENST00000602619 TRAPPC2P0DI81 140 aa1.25□□□□□ -2.21
SGMS1-207ENST00000602619 TRAPPC2BP0DI82 140 aa1.25□□□□□ -2.21
SGMS1-207ENST00000602619 C6orf52Q5T4I8 152 aa1.25□□□□□ -2.21
SGMS1-207ENST00000602619 GDF5OSQ5U4N7 250 aa1.25□□□□□ -2.21
SGMS1-207ENST00000602619 SCP2D1Q9UJQ7 156 aa1.25□□□□□ -2.21
SGMS1-207ENST00000602619 CASZ1Q86V15 1759 aa1.25□□□□□ -2.21
SGMS1-207ENST00000602619 KIAA1551Q9HCM1 1747 aa1.25□□□□□ -2.21
SGMS1-207ENST00000602619 TOGARAM1Q9Y4F4 1720 aa1.25□□□□□ -2.21
SGMS1-207ENST00000602619 RP1P56715 2156 aa1.25□□□□□ -2.21
SGMS1-207ENST00000602619 SCN7AQ01118 1682 aa1.25□□□□□ -2.21
SGMS1-207ENST00000602619 ZNF831Q5JPB2 1677 aa1.25□□□□□ -2.21
SGMS1-207ENST00000602619 MYH7P12883 1935 aa1.25□□□□□ -2.21
SGMS1-207ENST00000602619 BRWD1Q9NSI6 2320 aa1.24□□□□□ -2.21
SGMS1-207ENST00000602619 PLXNA3P51805 1871 aa1.24□□□□□ -2.21
SGMS1-207ENST00000602619 RTTNQ86VV8 2226 aa1.24□□□□□ -2.21
SGMS1-207ENST00000602619 RGPD8O14715 1765 aaPredicted RBP1.24□□□□□ -2.21
SGMS1-207ENST00000602619 RGPD2P0DJD1 1756 aa1.24□□□□□ -2.21
SGMS1-207ENST00000602619 LAMB2P55268 1798 aa1.24□□□□□ -2.21
SGMS1-207ENST00000602619 DDX60LQ5H9U9 1706 aaKnown RBP1.24□□□□□ -2.21
SGMS1-207ENST00000602619 NHSQ6T4R5 1651 aa1.24□□□□□ -2.21
SGMS1-207ENST00000602619 SCN3AQ9NY46 2000 aa1.24□□□□□ -2.21
SGMS1-207ENST00000602619 IGKV3-7A0A075B6H7 116 aa1.24□□□□□ -2.21
SGMS1-207ENST00000602619 TRBV6-7A0A0A0MS04 114 aa1.24□□□□□ -2.21
SGMS1-207ENST00000602619 FXYD1O00168 92 aa1.24□□□□□ -2.21
SGMS1-207ENST00000602619 GNGT2O14610 69 aa1.24□□□□□ -2.21
SGMS1-207ENST00000602619 HCRTO43612 131 aa1.24□□□□□ -2.21
SGMS1-207ENST00000602619 KRTAP12-4P60329 112 aa1.24□□□□□ -2.21
SGMS1-207ENST00000602619 RPL37AP61513 92 aaKnown RBP1.24□□□□□ -2.21
SGMS1-207ENST00000602619 NCBP2-AS2Q69YL0 99 aa1.24□□□□□ -2.21
SGMS1-207ENST00000602619 XAF1Q6GPH4 301 aa1.24□□□□□ -2.21
SGMS1-207ENST00000602619 AMELYQ99218 206 aa1.24□□□□□ -2.21
SGMS1-207ENST00000602619 CYSTM1Q9H1C7 97 aa1.24□□□□□ -2.21
SGMS1-207ENST00000602619 TANC2Q9HCD6 1990 aa1.24□□□□□ -2.21
SGMS1-207ENST00000602619 MUC4Q99102 2169 aa1.24□□□□□ -2.21
SGMS1-207ENST00000602619 LAMB1P07942 1786 aa1.24□□□□□ -2.21
SGMS1-207ENST00000602619 COL14A1Q05707 1796 aaKnown RBP1.24□□□□□ -2.21
SGMS1-207ENST00000602619 ANKRD36CQ5JPF3 1778 aa1.24□□□□□ -2.21
SGMS1-207ENST00000602619 COL4A1P02462 1669 aa1.23□□□□□ -2.21
SGMS1-207ENST00000602619 PTPRBP23467 1997 aa1.23□□□□□ -2.21
SGMS1-207ENST00000602619 MYLKQ15746 1914 aa1.23□□□□□ -2.21
SGMS1-207ENST00000602619 FCGBPQ9Y6R7 5405 aaPredicted RBP1.23□□□□□ -2.21
SGMS1-207ENST00000602619 BAZ2BQ9UIF8 2168 aaKnown RBP1.23□□□□□ -2.21
SGMS1-207ENST00000602619 SSC5DA1L4H1 1573 aa1.23□□□□□ -2.21
SGMS1-207ENST00000602619 TRBV7-1A0A0A6YYK4 115 aa1.23□□□□□ -2.21
SGMS1-207ENST00000602619 IGKV3D-7A0A0C4DH55 119 aa1.23□□□□□ -2.21
Retrieved 100 of 20,778 RNA–protein pairs in 119.3 ms