RNA–Protein interactions for RNA: ENST00000564403.6

TCF4-224, Transcript of transcription factor 4, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene TCF4, Length 2,696 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-224ENST00000564403 IGKV3-7A0A075B6H7 116 aa6.85□□□□□ -1.31
TCF4-224ENST00000564403 NDUFC2-KCTD14E9PQ53 114 aa6.85□□□□□ -1.31
TCF4-224ENST00000564403 H3BVH4 76 aa6.85□□□□□ -1.31
TCF4-224ENST00000564403 DEFB1P60022 68 aa6.85□□□□□ -1.31
TCF4-224ENST00000564403 SS18Q15532 418 aa6.85□□□□□ -1.31
TCF4-224ENST00000564403 C19orf54Q5BKX5 351 aa6.85□□□□□ -1.31
TCF4-224ENST00000564403 SMKR1H3BMG3 65 aa6.84□□□□□ -1.31
TCF4-224ENST00000564403 ATOX1O00244 68 aa6.84□□□□□ -1.31
TCF4-224ENST00000564403 SLC25A16P16260 332 aa6.84□□□□□ -1.31
TCF4-224ENST00000564403 ZNF80P51504 273 aaPredicted RBP6.84□□□□□ -1.31
TCF4-224ENST00000564403 SNRPD3P62318 126 aaKnown RBP6.84□□□□□ -1.31
TCF4-224ENST00000564403 TMEM75Q8N9X5 138 aa6.84□□□□□ -1.31
TCF4-224ENST00000564403 FASNP49327 2511 aaKnown RBP6.84□□□□□ -1.31
TCF4-224ENST00000564403 RPL18AQ02543 176 aaKnown RBP6.84□□□□□ -1.31
TCF4-224ENST00000564403 UPK3BQ9BT76 320 aa6.84□□□□□ -1.31
TCF4-224ENST00000564403 Q9H8V8 135 aa6.84□□□□□ -1.31
TCF4-224ENST00000564403 IGHG2P01859 326 aa6.83□□□□□ -1.32
TCF4-224ENST00000564403 ATP5L2Q7Z4Y8 100 aa6.83□□□□□ -1.32
TCF4-224ENST00000564403 DCANP1Q8TF63 244 aa6.83□□□□□ -1.32
TCF4-224ENST00000564403 LAMTOR3Q9UHA4 124 aa6.83□□□□□ -1.32
TCF4-224ENST00000564403 ORMDL2Q53FV1 153 aa6.83□□□□□ -1.32
TCF4-224ENST00000564403 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa6.83□□□□□ -1.32
TCF4-224ENST00000564403 Q8N1Y9 231 aa6.83□□□□□ -1.32
TCF4-224ENST00000564403 LYPD1Q8N2G4 141 aa6.83□□□□□ -1.32
TCF4-224ENST00000564403 LINC01356Q8N9X3 169 aa6.83□□□□□ -1.32
TCF4-224ENST00000564403 CHCHD1Q96BP2 118 aaKnown RBP6.83□□□□□ -1.32
TCF4-224ENST00000564403 NIPBLQ6KC79 2804 aaeCLIP6.83□□□□□ -1.32
TCF4-224ENST00000564403 CR1P17927 2039 aa6.83□□□□□ -1.32
TCF4-224ENST00000564403 WNK1Q9H4A3 2382 aa6.83□□□□□ -1.32
TCF4-224ENST00000564403 TRBV7-1A0A0A6YYK4 115 aa6.83□□□□□ -1.32
TCF4-224ENST00000564403 A0A1B0GXF2 115 aa6.83□□□□□ -1.32
TCF4-224ENST00000564403 ARMS2P0C7Q2 107 aa6.83□□□□□ -1.32
TCF4-224ENST00000564403 PDE6HQ13956 83 aa6.83□□□□□ -1.32
TCF4-224ENST00000564403 C11orf68Q9H3H3 251 aaKnown RBP6.83□□□□□ -1.32
TCF4-224ENST00000564403 ZNF492Q9P255 531 aa6.83□□□□□ -1.32
TCF4-224ENST00000564403 AKAP9Q99996 3911 aa6.82□□□□□ -1.32
TCF4-224ENST00000564403 ZNF138P52744 262 aa6.82□□□□□ -1.32
TCF4-224ENST00000564403 URB1-AS1Q96HZ7 61 aa6.82□□□□□ -1.32
TCF4-224ENST00000564403 PRR25Q96S07 402 aa6.82□□□□□ -1.32
TCF4-224ENST00000564403 K7EMI3 77 aa6.82□□□□□ -1.32
TCF4-224ENST00000564403 BEAN1Q3B7T3 259 aa6.82□□□□□ -1.32
TCF4-224ENST00000564403 METTL26Q96S19 204 aa6.82□□□□□ -1.32
TCF4-224ENST00000564403 GCN1Q92616 2671 aaKnown RBP6.82□□□□□ -1.32
TCF4-224ENST00000564403 UNC79Q9P2D8 2635 aa6.81□□□□□ -1.32
TCF4-224ENST00000564403 A0A0A0MQY5 61 aa6.81□□□□□ -1.32
TCF4-224ENST00000564403 SH2D1AO60880 128 aa6.81□□□□□ -1.32
TCF4-224ENST00000564403 HBBP68871 147 aa6.81□□□□□ -1.32
TCF4-224ENST00000564403 KLK9Q2XQG4 91 aa6.81□□□□□ -1.32
TCF4-224ENST00000564403 LGALS9CQ6DKI2 356 aa6.81□□□□□ -1.32
TCF4-224ENST00000564403 ZNF575Q86XF7 245 aa6.81□□□□□ -1.32
TCF4-224ENST00000564403 TMEM158Q8WZ71 300 aa6.81□□□□□ -1.32
TCF4-224ENST00000564403 KLK9Q9UKQ9 250 aa6.81□□□□□ -1.32
TCF4-224ENST00000564403 LGALS9O00182 355 aa6.81□□□□□ -1.32
TCF4-224ENST00000564403 PDZD2O15018 2839 aa6.81□□□□□ -1.32
TCF4-224ENST00000564403 DSCR9P59020 149 aa6.81□□□□□ -1.32
TCF4-224ENST00000564403 RPL11P62913 178 aaKnown RBP6.81□□□□□ -1.32
TCF4-224ENST00000564403 TRBV7-6A0A0J9YX20 115 aa6.8□□□□□ -1.32
TCF4-224ENST00000564403 IGHV4-31P0DP07 118 aa6.8□□□□□ -1.32
TCF4-224ENST00000564403 DEFB113Q30KQ7 82 aa6.8□□□□□ -1.32
TCF4-224ENST00000564403 FAM223BA6NKX1 122 aa6.8□□□□□ -1.32
TCF4-224ENST00000564403 FAM223AQ8IWN6 122 aa6.8□□□□□ -1.32
TCF4-224ENST00000564403 TM2D3Q9BRN9 247 aa6.8□□□□□ -1.32
TCF4-224ENST00000564403 KMT2BQ9UMN6 2715 aaPredicted RBP6.8□□□□□ -1.32
TCF4-224ENST00000564403 LOC107984156A0A0G2JMH3 177 aa6.79□□□□□ -1.32
TCF4-224ENST00000564403 SLC25A20O43772 301 aa6.79□□□□□ -1.32
TCF4-224ENST00000564403 CRIP2P52943 208 aaPredicted RBP6.79□□□□□ -1.32
TCF4-224ENST00000564403 LYZL1Q6UWQ5 148 aa6.79□□□□□ -1.32
TCF4-224ENST00000564403 GPHB5Q86YW7 130 aa6.79□□□□□ -1.32
TCF4-224ENST00000564403 ARL17AQ8IVW1 177 aa6.79□□□□□ -1.32
TCF4-224ENST00000564403 MSRB1Q9NZV6 116 aa6.79□□□□□ -1.32
TCF4-224ENST00000564403 NOTCH3Q9UM47 2321 aa6.79□□□□□ -1.32
TCF4-224ENST00000564403 F6UB75 175 aa6.79□□□□□ -1.32
TCF4-224ENST00000564403 UBE2D3P61077 147 aa6.79□□□□□ -1.32
TCF4-224ENST00000564403 UBE2D2P62837 147 aa6.79□□□□□ -1.32
TCF4-224ENST00000564403 NSUN5P1Q3KNT7 163 aa6.79□□□□□ -1.32
TCF4-224ENST00000564403 PAPPA-AS1Q5QFB9 102 aa6.79□□□□□ -1.32
TCF4-224ENST00000564403 NTN5Q8WTR8 489 aaPredicted RBP6.79□□□□□ -1.32
TCF4-224ENST00000564403 TRBV6-1A0A0K0K1D8 114 aa6.78□□□□□ -1.32
TCF4-224ENST00000564403 HOXA3O43365 443 aaPredicted RBP6.78□□□□□ -1.32
TCF4-224ENST00000564403 IGLV1-40P01703 118 aa6.78□□□□□ -1.32
TCF4-224ENST00000564403 C11orf21Q9P2W6 132 aa6.78□□□□□ -1.32
TCF4-224ENST00000564403 TIMM8BQ9Y5J9 83 aaPredicted RBP6.78□□□□□ -1.32
TCF4-224ENST00000564403 AGRNO00468 2067 aa6.78□□□□□ -1.32
TCF4-224ENST00000564403 A0A1B0GUT8 65 aa6.78□□□□□ -1.32
TCF4-224ENST00000564403 INAFM2P0DMQ5 153 aa6.78□□□□□ -1.32
TCF4-224ENST00000564403 ZFP2Q6ZN57 461 aa6.78□□□□□ -1.32
TCF4-224ENST00000564403 KRTAP1-3Q8IUG1 177 aa6.78□□□□□ -1.32
TCF4-224ENST00000564403 C6orf223Q8N319 242 aa6.78□□□□□ -1.32
TCF4-224ENST00000564403 SERP2Q8N6R1 65 aa6.78□□□□□ -1.32
TCF4-224ENST00000564403 GFRA4Q9GZZ7 299 aa6.78□□□□□ -1.32
TCF4-224ENST00000564403 MYMXA0A1B0GTQ4 84 aa6.77□□□□□ -1.33
TCF4-224ENST00000564403 NPYP01303 97 aa6.77□□□□□ -1.33
TCF4-224ENST00000564403 CFHR3Q02985 330 aa6.77□□□□□ -1.33
TCF4-224ENST00000564403 HIST1H4AP62805 103 aaKnown RBP6.77□□□□□ -1.33
TCF4-224ENST00000564403 KTN1-AS1Q86SY8 53 aa6.77□□□□□ -1.33
TCF4-224ENST00000564403 CXCL5P42830 114 aa6.76□□□□□ -1.33
TCF4-224ENST00000564403 RHPN1-AS1Q9BWJ2 59 aa6.76□□□□□ -1.33
TCF4-224ENST00000564403 NDUFA4O00483 81 aa6.76□□□□□ -1.33
TCF4-224ENST00000564403 GAS8-AS1O95177 125 aa6.76□□□□□ -1.33
TCF4-224ENST00000564403 PRR9Q5T870 116 aa6.76□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 11.6 ms