RNA–Protein interactions for RNA: ENST00000562084.5

BBS4-204, Transcript of Bardet-Biedl syndrome 4, humanhuman

TSL 1 (best)

Gene BBS4, Length 1,864 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BBS4-204ENST00000562084 CCDC179H3BU77 68 aa13.8□□□□□ -0.2
BBS4-204ENST00000562084 H7C423 109 aa13.8□□□□□ -0.2
BBS4-204ENST00000562084 MIAQ16674 131 aa13.8□□□□□ -0.2
BBS4-204ENST00000562084 UBTD1Q9HAC8 227 aa13.8□□□□□ -0.2
BBS4-204ENST00000562084 UNC79Q9P2D8 2635 aa13.79□□□□□ -0.2
BBS4-204ENST00000562084 TRAV12-3A0A0B4J271 114 aa13.79□□□□□ -0.2
BBS4-204ENST00000562084 IGHV1-58A0A0C4DH39 117 aa13.79□□□□□ -0.2
BBS4-204ENST00000562084 TIMM17BO60830 172 aa13.79□□□□□ -0.2
BBS4-204ENST00000562084 OPRPNQ99935 248 aaPredicted RBP13.79□□□□□ -0.2
BBS4-204ENST00000562084 SPG11Q96JI7 2443 aa13.79□□□□□ -0.2
BBS4-204ENST00000562084 LST1O00453 97 aa13.78□□□□□ -0.2
BBS4-204ENST00000562084 KRTAP10-9P60411 292 aa13.78□□□□□ -0.2
BBS4-204ENST00000562084 TRBV7-7A0A0K0K1E9 115 aa13.78□□□□□ -0.2
BBS4-204ENST00000562084 TMEM219Q86XT9 240 aa13.78□□□□□ -0.2
BBS4-204ENST00000562084 BEX4Q9NWD9 120 aaPredicted RBP13.78□□□□□ -0.2
BBS4-204ENST00000562084 ACYP1P07311 99 aa13.77□□□□□ -0.21
BBS4-204ENST00000562084 LMO4P61968 165 aa13.77□□□□□ -0.21
BBS4-204ENST00000562084 ITPR2Q14571 2701 aa13.76□□□□□ -0.21
BBS4-204ENST00000562084 IGHV3-64A0A075B6Q5 118 aa13.76□□□□□ -0.21
BBS4-204ENST00000562084 IGHG2P01859 326 aa13.76□□□□□ -0.21
BBS4-204ENST00000562084 DCANP1Q8TF63 244 aa13.76□□□□□ -0.21
BBS4-204ENST00000562084 ASH1LQ9NR48 2969 aaKnown RBP13.76□□□□□ -0.21
BBS4-204ENST00000562084 IGHV1OR15-1A0A075B7D0 117 aa13.76□□□□□ -0.21
BBS4-204ENST00000562084 DEFB104AQ8WTQ1 72 aa13.76□□□□□ -0.21
BBS4-204ENST00000562084 NRGNQ92686 78 aa13.76□□□□□ -0.21
BBS4-204ENST00000562084 IMUPQ9GZP8 106 aa13.76□□□□□ -0.21
BBS4-204ENST00000562084 LINC00527Q9UJ94 153 aa13.76□□□□□ -0.21
BBS4-204ENST00000562084 CD28P10747 220 aa13.75□□□□□ -0.21
BBS4-204ENST00000562084 NDUFA12Q9UI09 145 aa13.75□□□□□ -0.21
BBS4-204ENST00000562084 POLQO75417 2590 aa13.75□□□□□ -0.21
BBS4-204ENST00000562084 TINCRA0A1B0GVN0 87 aa13.74□□□□□ -0.21
BBS4-204ENST00000562084 PRSS2P07478 247 aa13.74□□□□□ -0.21
BBS4-204ENST00000562084 SPXQ9BT56 116 aa13.74□□□□□ -0.21
BBS4-204ENST00000562084 FLNBO75369 2602 aaKnown RBP13.74□□□□□ -0.21
BBS4-204ENST00000562084 IGKV3-7A0A075B6H7 116 aa13.74□□□□□ -0.21
BBS4-204ENST00000562084 TRGV11A0A075B6L2 103 aa13.74□□□□□ -0.21
BBS4-204ENST00000562084 TMEM61Q8N0U2 210 aa13.74□□□□□ -0.21
BBS4-204ENST00000562084 RNF152Q8N8N0 203 aa13.74□□□□□ -0.21
BBS4-204ENST00000562084 TMEM126AQ9H061 195 aa13.74□□□□□ -0.21
BBS4-204ENST00000562084 VSIG2Q96IQ7 327 aa13.73□□□□□ -0.21
BBS4-204ENST00000562084 IGHV3-11P01762 117 aa13.72□□□□□ -0.21
BBS4-204ENST00000562084 PF4V1P10720 104 aa13.72□□□□□ -0.21
BBS4-204ENST00000562084 TMEM101Q96IK0 257 aa13.72□□□□□ -0.21
BBS4-204ENST00000562084 IGLV1-40P01703 118 aa13.71□□□□□ -0.21
BBS4-204ENST00000562084 SNRPD3P62318 126 aaKnown RBP13.71□□□□□ -0.21
BBS4-204ENST00000562084 ANKRD17O75179 2603 aaKnown RBP13.71□□□□□ -0.22
BBS4-204ENST00000562084 ADAMTSL4-AS1Q5T5F5 129 aa13.7□□□□□ -0.22
BBS4-204ENST00000562084 MEIG1Q5JSS6 88 aa13.7□□□□□ -0.22
BBS4-204ENST00000562084 CCL19Q99731 98 aa13.7□□□□□ -0.22
BBS4-204ENST00000562084 ZNF580Q9UK33 172 aa13.7□□□□□ -0.22
BBS4-204ENST00000562084 COPS9Q8WXC6 57 aa13.69□□□□□ -0.22
BBS4-204ENST00000562084 PDZD2O15018 2839 aa13.68□□□□□ -0.22
BBS4-204ENST00000562084 FAM104AQ969W3 186 aa13.68□□□□□ -0.22
BBS4-204ENST00000562084 BPESC1Q9GZL8 116 aa13.68□□□□□ -0.22
BBS4-204ENST00000562084 A6NDX4 124 aa13.67□□□□□ -0.22
BBS4-204ENST00000562084 PIK3CD-AS1Q5SR53 167 aa13.67□□□□□ -0.22
BBS4-204ENST00000562084 CSMD2Q7Z408 3487 aa13.67□□□□□ -0.22
BBS4-204ENST00000562084 TRAV8-3A0A0A6YYJ7 113 aa13.67□□□□□ -0.22
BBS4-204ENST00000562084 ADARB2-AS1A8MUL3 147 aa13.67□□□□□ -0.22
BBS4-204ENST00000562084 CFAP161Q6P656 301 aa13.66□□□□□ -0.22
BBS4-204ENST00000562084 SMIM20Q8N5G0 67 aa13.66□□□□□ -0.22
BBS4-204ENST00000562084 CLEC2BQ92478 149 aa13.66□□□□□ -0.22
BBS4-204ENST00000562084 NDUFA1O15239 70 aa13.65□□□□□ -0.22
BBS4-204ENST00000562084 CIRBPQ14011 172 aaKnown RBP13.65□□□□□ -0.22
BBS4-204ENST00000562084 TNFRSF18Q9Y5U5 241 aa13.65□□□□□ -0.22
BBS4-204ENST00000562084 NAV2Q8IVL1 2488 aa13.65□□□□□ -0.22
BBS4-204ENST00000562084 SETXQ7Z333 2677 aaKnown RBP13.65□□□□□ -0.22
BBS4-204ENST00000562084 ATP5G1P05496 136 aa13.65□□□□□ -0.22
BBS4-204ENST00000562084 CFHR3Q02985 330 aa13.65□□□□□ -0.22
BBS4-204ENST00000562084 DUX3Q96PT4 197 aa13.65□□□□□ -0.22
BBS4-204ENST00000562084 K7EQG2 157 aa13.64□□□□□ -0.23
BBS4-204ENST00000562084 TRAV12-2A0A075B6T6 113 aa13.63□□□□□ -0.23
BBS4-204ENST00000562084 TIRAPP58753 221 aa13.63□□□□□ -0.23
BBS4-204ENST00000562084 HERV-K104P63124 156 aa13.63□□□□□ -0.23
BBS4-204ENST00000562084 MAP1AP78559 2803 aaPredicted RBP13.63□□□□□ -0.23
BBS4-204ENST00000562084 IGLV5-45A0A087WSX0 123 aa13.63□□□□□ -0.23
BBS4-204ENST00000562084 UBE2D4Q9Y2X8 147 aa13.63□□□□□ -0.23
BBS4-204ENST00000562084 LINC00643Q86TS7 51 aa13.62□□□□□ -0.23
BBS4-204ENST00000562084 COX7A2LO14548 114 aa13.61□□□□□ -0.23
BBS4-204ENST00000562084 DNAJC30Q96LL9 226 aa13.61□□□□□ -0.23
BBS4-204ENST00000562084 PPDPFQ9H3Y8 114 aa13.61□□□□□ -0.23
BBS4-204ENST00000562084 TMEM89A2RUT3 159 aa13.61□□□□□ -0.23
BBS4-204ENST00000562084 SPINK13Q1W4C9 94 aa13.61□□□□□ -0.23
BBS4-204ENST00000562084 CHCHD7Q9BUK0 85 aa13.61□□□□□ -0.23
BBS4-204ENST00000562084 NOTCH2Q04721 2471 aa13.61□□□□□ -0.23
BBS4-204ENST00000562084 PRRC2AP48634 2157 aaKnown RBP13.6□□□□□ -0.23
BBS4-204ENST00000562084 ATP5J2P56134 94 aa13.6□□□□□ -0.23
BBS4-204ENST00000562084 DEFB113Q30KQ7 82 aa13.6□□□□□ -0.23
BBS4-204ENST00000562084 LINC01587Q99440 93 aa13.6□□□□□ -0.23
BBS4-204ENST00000562084 CHCHD5Q9BSY4 110 aa13.6□□□□□ -0.23
BBS4-204ENST00000562084 CSMD1Q96PZ7 3565 aa13.6□□□□□ -0.23
BBS4-204ENST00000562084 IGHV3OR16-10A0A075B7F0 116 aa13.59□□□□□ -0.23
BBS4-204ENST00000562084 H3BUX3 64 aa13.59□□□□□ -0.23
BBS4-204ENST00000562084 TRACP01848 142 aa13.59□□□□□ -0.23
BBS4-204ENST00000562084 LY6EQ16553 131 aa13.59□□□□□ -0.23
BBS4-204ENST00000562084 BRD3OSQ6XYD6 125 aa13.59□□□□□ -0.23
BBS4-204ENST00000562084 CXCL5P42830 114 aa13.58□□□□□ -0.24
BBS4-204ENST00000562084 CITED2Q99967 270 aaPredicted RBP13.58□□□□□ -0.24
BBS4-204ENST00000562084 CCDC168Q8NDH2 2452 aa13.58□□□□□ -0.24
BBS4-204ENST00000562084 IGKV3-20P01619 116 aa13.57□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 109.5 ms