RNA–Protein interactions for RNA: ENST00000559100.1

GABPB1-209, Transcript of GA binding protein transcription factor subunit beta 1, humanhuman

TSL 3

Gene GABPB1, Length 290 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABPB1-209ENST00000559100 BCL9LQ86UU0 1499 aa0.58□□□□□ -2.32
GABPB1-209ENST00000559100 CDK13Q14004 1512 aaKnown RBP0.58□□□□□ -2.32
GABPB1-209ENST00000559100 FAM135AQ9P2D6 1515 aa0.58□□□□□ -2.32
GABPB1-209ENST00000559100 ARFGEF1Q9Y6D6 1849 aa0.57□□□□□ -2.32
GABPB1-209ENST00000559100 LRRC37A3O60309 1634 aa0.57□□□□□ -2.32
GABPB1-209ENST00000559100 ATP6V1G2-DDX39BF2Z307 99 aa0.57□□□□□ -2.32
GABPB1-209ENST00000559100 M0R135 149 aa0.57□□□□□ -2.32
GABPB1-209ENST00000559100 NMBP08949 121 aa0.57□□□□□ -2.32
GABPB1-209ENST00000559100 CCL18P55774 89 aa0.57□□□□□ -2.32
GABPB1-209ENST00000559100 DPH3P1Q9H4G8 78 aa0.57□□□□□ -2.32
GABPB1-209ENST00000559100 C10orf95Q9H7T3 257 aa0.57□□□□□ -2.32
GABPB1-209ENST00000559100 DYNLRB1Q9NP97 96 aa0.57□□□□□ -2.32
GABPB1-209ENST00000559100 UQCR10Q9UDW1 63 aa0.57□□□□□ -2.32
GABPB1-209ENST00000559100 LENEPQ9Y5L5 61 aa0.57□□□□□ -2.32
GABPB1-209ENST00000559100 CUL7Q14999 1698 aa0.56□□□□□ -2.32
GABPB1-209ENST00000559100 ZNF462Q96JM2 2506 aa0.56□□□□□ -2.32
GABPB1-209ENST00000559100 TMEM218A2RU14 115 aa0.56□□□□□ -2.32
GABPB1-209ENST00000559100 CHKB-CPT1BH3BT56 60 aa0.56□□□□□ -2.32
GABPB1-209ENST00000559100 HSD52Q0P140 79 aa0.56□□□□□ -2.32
GABPB1-209ENST00000559100 TMEM170BQ5T4T1 132 aa0.56□□□□□ -2.32
GABPB1-209ENST00000559100 SMIM4Q8WVI0 70 aa0.56□□□□□ -2.32
GABPB1-209ENST00000559100 LINC00474Q9P2X8 69 aa0.56□□□□□ -2.32
GABPB1-209ENST00000559100 PLXNA1Q9UIW2 1896 aa0.56□□□□□ -2.32
GABPB1-209ENST00000559100 MED13LQ71F56 2210 aa0.56□□□□□ -2.32
GABPB1-209ENST00000559100 TNS1Q9HBL0 1735 aaKnown RBP0.55□□□□□ -2.32
GABPB1-209ENST00000559100 PZPP20742 1482 aa0.55□□□□□ -2.32
GABPB1-209ENST00000559100 MRC1P22897 1456 aa0.55□□□□□ -2.32
GABPB1-209ENST00000559100 MAP2P11137 1827 aaKnown RBP0.55□□□□□ -2.32
GABPB1-209ENST00000559100 TANC1Q9C0D5 1861 aa0.55□□□□□ -2.32
GABPB1-209ENST00000559100 F5P12259 2224 aa0.55□□□□□ -2.32
GABPB1-209ENST00000559100 LOC285095A0A1B0GVY8 99 aa0.55□□□□□ -2.32
GABPB1-209ENST00000559100 F8VRH5 84 aa0.55□□□□□ -2.32
GABPB1-209ENST00000559100 APOC3P02656 99 aa0.55□□□□□ -2.32
GABPB1-209ENST00000559100 COX6A2Q02221 97 aa0.55□□□□□ -2.32
GABPB1-209ENST00000559100 UBE2DNLQ8IWF7 75 aa0.55□□□□□ -2.32
GABPB1-209ENST00000559100 C14orf144Q96I85 54 aa0.55□□□□□ -2.32
GABPB1-209ENST00000559100 MANBALQ9NQG1 85 aa0.55□□□□□ -2.32
GABPB1-209ENST00000559100 NDUFA4L2Q9NRX3 87 aa0.55□□□□□ -2.32
GABPB1-209ENST00000559100 C10orf71Q711Q0 1435 aa0.55□□□□□ -2.32
GABPB1-209ENST00000559100 NRKQ7Z2Y5 1582 aa0.54□□□□□ -2.32
GABPB1-209ENST00000559100 QRICH2Q9H0J4 1663 aa0.54□□□□□ -2.32
GABPB1-209ENST00000559100 NAP1L6A6NFF2 107 aa0.54□□□□□ -2.32
GABPB1-209ENST00000559100 CRYM-AS1A6NIL9 109 aa0.54□□□□□ -2.32
GABPB1-209ENST00000559100 HMGN4O00479 90 aa0.54□□□□□ -2.32
GABPB1-209ENST00000559100 RBP2P50120 134 aa0.54□□□□□ -2.32
GABPB1-209ENST00000559100 S100A10P60903 97 aa0.54□□□□□ -2.32
GABPB1-209ENST00000559100 KRTDAPP60985 99 aa0.54□□□□□ -2.32
GABPB1-209ENST00000559100 COX17Q14061 63 aa0.54□□□□□ -2.32
GABPB1-209ENST00000559100 Q5VV11 94 aa0.54□□□□□ -2.32
GABPB1-209ENST00000559100 PROK2Q9HC23 129 aa0.54□□□□□ -2.32
GABPB1-209ENST00000559100 SCAPERQ9BY12 1400 aa0.54□□□□□ -2.32
GABPB1-209ENST00000559100 MYH8P13535 1937 aa0.54□□□□□ -2.32
GABPB1-209ENST00000559100 PXDNQ92626 1479 aa0.54□□□□□ -2.32
GABPB1-209ENST00000559100 JMJD1CQ15652 2540 aa0.54□□□□□ -2.32
GABPB1-209ENST00000559100 MAPKBP1O60336 1514 aa0.54□□□□□ -2.32
GABPB1-209ENST00000559100 ZMYM4Q5VZL5 1548 aa0.54□□□□□ -2.32
GABPB1-209ENST00000559100 PATJQ8NI35 1801 aa0.53□□□□□ -2.32
GABPB1-209ENST00000559100 IGLC7A0M8Q6 106 aa0.53□□□□□ -2.32
GABPB1-209ENST00000559100 UQCR11O14957 56 aa0.53□□□□□ -2.32
GABPB1-209ENST00000559100 PIN1P1O15428 100 aa0.53□□□□□ -2.32
GABPB1-209ENST00000559100 TRAPPC2P0DI81 140 aa0.53□□□□□ -2.32
GABPB1-209ENST00000559100 TRAPPC2BP0DI82 140 aa0.53□□□□□ -2.32
GABPB1-209ENST00000559100 HAMPP81172 84 aa0.53□□□□□ -2.32
GABPB1-209ENST00000559100 BAGE2Q86Y30 109 aa0.53□□□□□ -2.32
GABPB1-209ENST00000559100 FAM213BQ8TBF2 198 aa0.53□□□□□ -2.32
GABPB1-209ENST00000559100 FAIMQ9NVQ4 179 aa0.53□□□□□ -2.32
GABPB1-209ENST00000559100 AP4S1Q9Y587 144 aa0.53□□□□□ -2.32
GABPB1-209ENST00000559100 ZNF469Q96JG9 3925 aaPredicted RBP0.53□□□□□ -2.32
GABPB1-209ENST00000559100 GOLGA3Q08378 1498 aa0.53□□□□□ -2.33
GABPB1-209ENST00000559100 LAMC3Q9Y6N6 1575 aa0.53□□□□□ -2.33
GABPB1-209ENST00000559100 RIMS1Q86UR5 1692 aaKnown RBP0.53□□□□□ -2.33
GABPB1-209ENST00000559100 ROBO1Q9Y6N7 1651 aa0.53□□□□□ -2.33
GABPB1-209ENST00000559100 DOCK1Q14185 1865 aa0.52□□□□□ -2.33
GABPB1-209ENST00000559100 SFT2D2O95562 160 aa0.52□□□□□ -2.33
GABPB1-209ENST00000559100 S100A3P33764 101 aa0.52□□□□□ -2.33
GABPB1-209ENST00000559100 Q0VG73 95 aa0.52□□□□□ -2.33
GABPB1-209ENST00000559100 SFTA2Q6UW10 78 aa0.52□□□□□ -2.33
GABPB1-209ENST00000559100 SSBP3-AS1Q7Z2R9 100 aa0.52□□□□□ -2.33
GABPB1-209ENST00000559100 PLAC8Q9NZF1 115 aa0.52□□□□□ -2.33
GABPB1-209ENST00000559100 ARL2-SNX15V9GYD0 113 aa0.52□□□□□ -2.33
GABPB1-209ENST00000559100 APCP25054 2843 aa0.52□□□□□ -2.33
GABPB1-209ENST00000559100 SSC5DA1L4H1 1573 aa0.52□□□□□ -2.33
GABPB1-209ENST00000559100 PRDM2Q13029 1718 aa0.52□□□□□ -2.33
GABPB1-209ENST00000559100 DOCK2Q92608 1830 aa0.52□□□□□ -2.33
GABPB1-209ENST00000559100 DOCK11Q5JSL3 2073 aa0.52□□□□□ -2.33
GABPB1-209ENST00000559100 NOTCH1P46531 2555 aa0.51□□□□□ -2.33
GABPB1-209ENST00000559100 MEGF8Q7Z7M0 2845 aa0.51□□□□□ -2.33
GABPB1-209ENST00000559100 FBN2P35556 2912 aa0.51□□□□□ -2.33
GABPB1-209ENST00000559100 ZNF815PA8K554 130 aa0.51□□□□□ -2.33
GABPB1-209ENST00000559100 TMEM262E9PQX1 116 aa0.51□□□□□ -2.33
GABPB1-209ENST00000559100 G3V318 75 aa0.51□□□□□ -2.33
GABPB1-209ENST00000559100 H3BQ15 152 aa0.51□□□□□ -2.33
GABPB1-209ENST00000559100 ZNF609O15014 1411 aa0.51□□□□□ -2.33
GABPB1-209ENST00000559100 COX6CP09669 75 aa0.51□□□□□ -2.33
GABPB1-209ENST00000559100 PI4KAP42356 2102 aa0.51□□□□□ -2.33
GABPB1-209ENST00000559100 ARHGAP5Q13017 1502 aa0.51□□□□□ -2.33
GABPB1-209ENST00000559100 NXT2Q9NPJ8 142 aaKnown RBP0.51□□□□□ -2.33
GABPB1-209ENST00000559100 IFT172Q9UG01 1749 aa0.51□□□□□ -2.33
GABPB1-209ENST00000559100 SIPA1L3O60292 1781 aaPredicted RBP0.5□□□□□ -2.33
GABPB1-209ENST00000559100 TRAV30A0A087WSZ9 112 aa0.5□□□□□ -2.33
Retrieved 100 of 20,778 RNA–protein pairs in 51.8 ms