RNA–Protein interactions for RNA: ENST00000554533.5

CASC1-207, Transcript of cancer susceptibility 1, humanhuman

TSL 2

Gene CASC1, Length 2,208 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC1-207ENST00000554533 LINC00588Q9Y4M8 146 aa3.59□□□□□ -1.83
CASC1-207ENST00000554533 KMT2BQ9UMN6 2715 aaPredicted RBP3.59□□□□□ -1.83
CASC1-207ENST00000554533 TLN1Q9Y490 2541 aaKnown RBP3.59□□□□□ -1.84
CASC1-207ENST00000554533 CHD6Q8TD26 2715 aa3.59□□□□□ -1.84
CASC1-207ENST00000554533 IGHV3OR16-10A0A075B7F0 116 aa3.59□□□□□ -1.84
CASC1-207ENST00000554533 TRBV27A0A0K0K1C4 114 aa3.59□□□□□ -1.84
CASC1-207ENST00000554533 NDUFB3O43676 98 aa3.59□□□□□ -1.84
CASC1-207ENST00000554533 MKXQ8IYA7 352 aa3.59□□□□□ -1.84
CASC1-207ENST00000554533 ZGRF1Q86YA3 2104 aa3.59□□□□□ -1.84
CASC1-207ENST00000554533 SVILO95425 2214 aa3.59□□□□□ -1.84
CASC1-207ENST00000554533 RP1L1Q8IWN7 2480 aaPredicted RBP3.58□□□□□ -1.84
CASC1-207ENST00000554533 IGLV3-12A0A075B6K2 115 aa3.58□□□□□ -1.84
CASC1-207ENST00000554533 IGHV3-33P01772 117 aa3.58□□□□□ -1.84
CASC1-207ENST00000554533 SCGB1D4Q6XE38 83 aa3.58□□□□□ -1.84
CASC1-207ENST00000554533 DEFB127Q9H1M4 99 aa3.58□□□□□ -1.84
CASC1-207ENST00000554533 DYNLRB1Q9NP97 96 aa3.58□□□□□ -1.84
CASC1-207ENST00000554533 MRPL35Q9NZE8 188 aaKnown RBP3.58□□□□□ -1.84
CASC1-207ENST00000554533 COL6A6A6NMZ7 2263 aa3.58□□□□□ -1.84
CASC1-207ENST00000554533 KALRNO60229 2985 aa3.58□□□□□ -1.84
CASC1-207ENST00000554533 SPTA1P02549 2419 aa3.58□□□□□ -1.84
CASC1-207ENST00000554533 BSNQ9UPA5 3926 aa3.58□□□□□ -1.84
CASC1-207ENST00000554533 IGKV3D-7A0A0C4DH55 119 aa3.58□□□□□ -1.84
CASC1-207ENST00000554533 LYRM9A8MSI8 78 aa3.58□□□□□ -1.84
CASC1-207ENST00000554533 Q8N377 158 aa3.58□□□□□ -1.84
CASC1-207ENST00000554533 CCL17Q92583 94 aa3.58□□□□□ -1.84
CASC1-207ENST00000554533 CCL28Q9NRJ3 127 aa3.58□□□□□ -1.84
CASC1-207ENST00000554533 FAM208BQ5VWN6 2430 aa3.57□□□□□ -1.84
CASC1-207ENST00000554533 IGKV1D-17A0A075B6S4 117 aa3.57□□□□□ -1.84
CASC1-207ENST00000554533 IGHV1-45A0A0A0MS14 117 aa3.57□□□□□ -1.84
CASC1-207ENST00000554533 M0R381 172 aa3.57□□□□□ -1.84
CASC1-207ENST00000554533 LST1O00453 97 aa3.57□□□□□ -1.84
CASC1-207ENST00000554533 NDUFS5O43920 106 aa3.57□□□□□ -1.84
CASC1-207ENST00000554533 NDUFA3O95167 84 aa3.57□□□□□ -1.84
CASC1-207ENST00000554533 PRB4P10163 310 aaPredicted RBP3.57□□□□□ -1.84
CASC1-207ENST00000554533 Q1RN00 199 aa3.57□□□□□ -1.84
CASC1-207ENST00000554533 RPP21Q9H633 154 aaKnown RBP3.57□□□□□ -1.84
CASC1-207ENST00000554533 SMG1Q96Q15 3661 aaKnown RBP3.57□□□□□ -1.84
CASC1-207ENST00000554533 IGKV1D-13A0A0B4J2D9 117 aa3.56□□□□□ -1.84
CASC1-207ENST00000554533 ZNF815PA8K554 130 aa3.56□□□□□ -1.84
CASC1-207ENST00000554533 D6R8Y8 96 aa3.56□□□□□ -1.84
CASC1-207ENST00000554533 F8WEM9 126 aa3.56□□□□□ -1.84
CASC1-207ENST00000554533 SH2D1AO60880 128 aa3.56□□□□□ -1.84
CASC1-207ENST00000554533 IGKV1-39P01597 117 aa3.56□□□□□ -1.84
CASC1-207ENST00000554533 IGKV1-5P01602 117 aa3.56□□□□□ -1.84
CASC1-207ENST00000554533 IGKV1D-39P04432 117 aa3.56□□□□□ -1.84
CASC1-207ENST00000554533 IGKV1-13P0DP09 117 aa3.56□□□□□ -1.84
CASC1-207ENST00000554533 ITLN1Q8WWA0 313 aa3.56□□□□□ -1.84
CASC1-207ENST00000554533 DNAJC13O75165 2243 aa3.56□□□□□ -1.84
CASC1-207ENST00000554533 NBASA2RRP1 2371 aa3.56□□□□□ -1.84
CASC1-207ENST00000554533 IGKV3D-11A0A0A0MRZ8 115 aa3.56□□□□□ -1.84
CASC1-207ENST00000554533 IBA57-AS1B1ANH7 110 aa3.56□□□□□ -1.84
CASC1-207ENST00000554533 UBE2L6O14933 153 aa3.56□□□□□ -1.84
CASC1-207ENST00000554533 IGHV3-30P01768 117 aa3.56□□□□□ -1.84
CASC1-207ENST00000554533 IGHV3-30-5P0DP03 117 aa3.56□□□□□ -1.84
CASC1-207ENST00000554533 DYNAPQ8N1N2 210 aa3.56□□□□□ -1.84
CASC1-207ENST00000554533 FAM216BQ8N7L0 139 aa3.56□□□□□ -1.84
CASC1-207ENST00000554533 FDCSPQ8NFU4 85 aa3.56□□□□□ -1.84
CASC1-207ENST00000554533 TMEM263Q8WUH6 116 aaKnown RBP3.56□□□□□ -1.84
CASC1-207ENST00000554533 IMMP1LQ96LU5 166 aa3.56□□□□□ -1.84
CASC1-207ENST00000554533 TIMM21Q9BVV7 248 aa3.56□□□□□ -1.84
CASC1-207ENST00000554533 KRTAP4-2Q9BYR5 136 aa3.56□□□□□ -1.84
CASC1-207ENST00000554533 TMEM167BQ9NRX6 74 aa3.56□□□□□ -1.84
CASC1-207ENST00000554533 PRRC2AP48634 2157 aaKnown RBP3.56□□□□□ -1.84
CASC1-207ENST00000554533 IGLV3-21P80748 117 aaPredicted RBP3.55□□□□□ -1.84
CASC1-207ENST00000554533 LINC00322Q6ZN03 302 aaPredicted RBP3.55□□□□□ -1.84
CASC1-207ENST00000554533 MIR17HGQ75NE6 70 aa3.55□□□□□ -1.84
CASC1-207ENST00000554533 SPTSSAQ969W0 71 aa3.55□□□□□ -1.84
CASC1-207ENST00000554533 DEFB126Q9BYW3 111 aa3.55□□□□□ -1.84
CASC1-207ENST00000554533 GFRA4Q9GZZ7 299 aa3.55□□□□□ -1.84
CASC1-207ENST00000554533 DHRS4-AS1Q9P1J3 65 aa3.55□□□□□ -1.84
CASC1-207ENST00000554533 CFAP46Q8IYW2 2715 aa3.55□□□□□ -1.84
CASC1-207ENST00000554533 SPENQ96T58 3664 aaKnown RBP3.55□□□□□ -1.84
CASC1-207ENST00000554533 IGKV1-9A0A0C4DH69 117 aa3.55□□□□□ -1.84
CASC1-207ENST00000554533 TRBV30A0A0K0K1B3 111 aa3.55□□□□□ -1.84
CASC1-207ENST00000554533 A8MU10 97 aa3.55□□□□□ -1.84
CASC1-207ENST00000554533 IGKV3-20P01619 116 aa3.55□□□□□ -1.84
CASC1-207ENST00000554533 CSNK1G2-AS1Q8NCQ2 148 aa3.55□□□□□ -1.84
CASC1-207ENST00000554533 RMI2Q96E14 147 aa3.55□□□□□ -1.84
CASC1-207ENST00000554533 UBE2D4Q9Y2X8 147 aa3.55□□□□□ -1.84
CASC1-207ENST00000554533 ZNF407Q9C0G0 2248 aa3.55□□□□□ -1.84
CASC1-207ENST00000554533 PIGBOS1A0A0B4J2F0 54 aa3.54□□□□□ -1.84
CASC1-207ENST00000554533 A0A0J9YY99 117 aa3.54□□□□□ -1.84
CASC1-207ENST00000554533 IGHV3-13P01766 116 aa3.54□□□□□ -1.84
CASC1-207ENST00000554533 FUSP35637 526 aaKnown RBP eCLIP3.54□□□□□ -1.84
CASC1-207ENST00000554533 ATP5EP56381 51 aaPredicted RBP3.54□□□□□ -1.84
CASC1-207ENST00000554533 KLKP1Q107X0 134 aa3.54□□□□□ -1.84
CASC1-207ENST00000554533 NNATQ16517 81 aa3.54□□□□□ -1.84
CASC1-207ENST00000554533 Q6JHZ5 121 aa3.54□□□□□ -1.84
CASC1-207ENST00000554533 LCA10Q71F78 164 aa3.54□□□□□ -1.84
CASC1-207ENST00000554533 VSIG2Q96IQ7 327 aa3.54□□□□□ -1.84
CASC1-207ENST00000554533 KRTAP4-5Q9BYR2 181 aa3.54□□□□□ -1.84
CASC1-207ENST00000554533 SNURFQ9Y675 71 aa3.54□□□□□ -1.84
CASC1-207ENST00000554533 TRAV8-3A0A0A6YYJ7 113 aa3.54□□□□□ -1.84
CASC1-207ENST00000554533 IGLV1-36A0A0B4J1U3 117 aa3.54□□□□□ -1.84
CASC1-207ENST00000554533 TRAV13-2A0A0B4J235 113 aa3.54□□□□□ -1.84
CASC1-207ENST00000554533 A0A1B0GUT8 65 aa3.54□□□□□ -1.84
CASC1-207ENST00000554533 TMEM223A0PJW6 202 aa3.54□□□□□ -1.84
CASC1-207ENST00000554533 NDUFAF8A1L188 74 aa3.54□□□□□ -1.84
CASC1-207ENST00000554533 ARMS2P0C7Q2 107 aa3.54□□□□□ -1.84
CASC1-207ENST00000554533 PLNP26678 52 aa3.54□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 46.5 ms