RNA–Protein interactions for RNA: ENST00000554533.5

CASC1-207, Transcript of cancer susceptibility 1, humanhuman

TSL 2

Gene CASC1, Length 2,208 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC1-207ENST00000554533 CHIC1Q5VXU3 224 aa17.64■□□□□ 0.41
CASC1-207ENST00000554533 AEBP2Q6ZN18 517 aaPredicted RBP17.55■□□□□ 0.4
CASC1-207ENST00000554533 PHF23Q9BUL5 403 aaPredicted RBP15.65■□□□□ 0.1
CASC1-207ENST00000554533 SENP3Q9H4L4 574 aaPredicted RBP14.68□□□□□ -0.06
CASC1-207ENST00000554533 PLPPR3Q6T4P5 718 aa14.54□□□□□ -0.08
CASC1-207ENST00000554533 ADRA2BP18089 450 aa13.72□□□□□ -0.21
CASC1-207ENST00000554533 FOXD1Q16676 465 aa13.63□□□□□ -0.23
CASC1-207ENST00000554533 PPP6R1Q9UPN7 881 aa13.62□□□□□ -0.23
CASC1-207ENST00000554533 KCNA4P22459 653 aa13.35□□□□□ -0.27
CASC1-207ENST00000554533 EHMT2Q96KQ7 1210 aa13.13□□□□□ -0.31
CASC1-207ENST00000554533 PIAS4Q8N2W9 510 aaPredicted RBP12.97□□□□□ -0.33
CASC1-207ENST00000554533 PPP4R3CPQ6ZMV5 832 aa12.93□□□□□ -0.34
CASC1-207ENST00000554533 SLC4A1APQ9BWU0 796 aaKnown RBP12.76□□□□□ -0.37
CASC1-207ENST00000554533 CSRNP3Q8WYN3 585 aa12.7□□□□□ -0.38
CASC1-207ENST00000554533 NCBP3Q53F19 620 aaKnown RBP12.68□□□□□ -0.38
CASC1-207ENST00000554533 NPM3O75607 178 aaKnown RBP12.6□□□□□ -0.39
CASC1-207ENST00000554533 CNKSR2Q8WXI2 1034 aa12.4□□□□□ -0.42
CASC1-207ENST00000554533 ZBTB22O15209 634 aa12.34□□□□□ -0.43
CASC1-207ENST00000554533 SCAF1Q9H7N4 1312 aaKnown RBP12.31□□□□□ -0.44
CASC1-207ENST00000554533 MSH5O43196 834 aa12.24□□□□□ -0.45
CASC1-207ENST00000554533 MAPK8IP2Q13387 824 aaPredicted RBP12.2□□□□□ -0.46
CASC1-207ENST00000554533 DNAJC5BQ9UF47 199 aa12.08□□□□□ -0.48
CASC1-207ENST00000554533 FOXD4L1Q9NU39 408 aa12.05□□□□□ -0.48
CASC1-207ENST00000554533 RNF216Q9NWF9 866 aaPredicted RBP12.01□□□□□ -0.49
CASC1-207ENST00000554533 DMRT2Q9Y5R5 561 aa11.84□□□□□ -0.51
CASC1-207ENST00000554533 HOXD11P31277 338 aaPredicted RBP11.83□□□□□ -0.52
CASC1-207ENST00000554533 SLC4A2P04920 1241 aa11.78□□□□□ -0.52
CASC1-207ENST00000554533 MYCNP04198 464 aaPredicted RBP11.58□□□□□ -0.56
CASC1-207ENST00000554533 ATXN8OSP0DMR3 200 aa11.54□□□□□ -0.56
CASC1-207ENST00000554533 RTN4Q9NQC3 1192 aaKnown RBP11.48□□□□□ -0.57
CASC1-207ENST00000554533 FKBP8Q14318 412 aa11.42□□□□□ -0.58
CASC1-207ENST00000554533 AMER1Q5JTC6 1135 aaPredicted RBP11.39□□□□□ -0.59
CASC1-207ENST00000554533 ATF5Q9Y2D1 282 aaPredicted RBP11.33□□□□□ -0.6
CASC1-207ENST00000554533 DCAF8L1A6NGE4 600 aa11.29□□□□□ -0.6
CASC1-207ENST00000554533 SLC24A1O60721 1099 aa11.28□□□□□ -0.6
CASC1-207ENST00000554533 GRWD1Q9BQ67 446 aaKnown RBP eCLIP11.25□□□□□ -0.61
CASC1-207ENST00000554533 U3KPZ7 1027 aaPredicted RBP11.2□□□□□ -0.62
CASC1-207ENST00000554533 SAMD1Q6SPF0 538 aaPredicted RBP11.15□□□□□ -0.62
CASC1-207ENST00000554533 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP11.13□□□□□ -0.63
CASC1-207ENST00000554533 HNRNPUL2Q1KMD3 747 aaKnown RBP11.13□□□□□ -0.63
CASC1-207ENST00000554533 ZNF219Q9P2Y4 722 aaPredicted RBP11□□□□□ -0.65
CASC1-207ENST00000554533 MKRN4PQ13434 485 aaPredicted RBP10.85□□□□□ -0.67
CASC1-207ENST00000554533 APLP2Q06481 763 aa10.84□□□□□ -0.67
CASC1-207ENST00000554533 SPDYE4A6NLX3 237 aa10.82□□□□□ -0.68
CASC1-207ENST00000554533 FBXO3Q9UK99 471 aa10.76□□□□□ -0.69
CASC1-207ENST00000554533 PROM2Q8N271 834 aa10.76□□□□□ -0.69
CASC1-207ENST00000554533 SPINK5Q9NQ38 1064 aaPredicted RBP10.73□□□□□ -0.69
CASC1-207ENST00000554533 TRHP20396 242 aaPredicted RBP10.7□□□□□ -0.7
CASC1-207ENST00000554533 VASPP50552 380 aaPredicted RBP10.68□□□□□ -0.7
CASC1-207ENST00000554533 FBLN2P98095 1184 aa10.67□□□□□ -0.7
CASC1-207ENST00000554533 POLA2Q14181 598 aa10.66□□□□□ -0.7
CASC1-207ENST00000554533 IFNLR1Q8IU57 520 aaPredicted RBP10.61□□□□□ -0.71
CASC1-207ENST00000554533 RNF39Q9H2S5 420 aa10.61□□□□□ -0.71
CASC1-207ENST00000554533 CAPN15O75808 1086 aa10.6□□□□□ -0.71
CASC1-207ENST00000554533 PLCB2Q00722 1185 aa10.54□□□□□ -0.72
CASC1-207ENST00000554533 ABCB7O75027 752 aa10.49□□□□□ -0.73
CASC1-207ENST00000554533 PKD2Q13563 968 aa10.49□□□□□ -0.73
CASC1-207ENST00000554533 C1QBPQ07021 282 aaKnown RBP10.46□□□□□ -0.74
CASC1-207ENST00000554533 DCAF8L2P0C7V8 631 aa10.45□□□□□ -0.74
CASC1-207ENST00000554533 ZBTB12Q9Y330 459 aaPredicted RBP10.44□□□□□ -0.74
CASC1-207ENST00000554533 HAP1P54257 671 aaPredicted RBP10.39□□□□□ -0.75
CASC1-207ENST00000554533 SPOCK2Q92563 424 aa10.33□□□□□ -0.76
CASC1-207ENST00000554533 ZNF692Q9BU19 519 aaPredicted RBP10.32□□□□□ -0.76
CASC1-207ENST00000554533 KLHL34Q8N239 644 aa10.31□□□□□ -0.76
CASC1-207ENST00000554533 DSG3P32926 999 aa10.31□□□□□ -0.76
CASC1-207ENST00000554533 OSCARQ8IYS5 282 aa10.31□□□□□ -0.76
CASC1-207ENST00000554533 SSUH2Q9Y2M2 353 aa10.28□□□□□ -0.76
CASC1-207ENST00000554533 ECM2O94769 699 aaPredicted RBP10.26□□□□□ -0.77
CASC1-207ENST00000554533 STAG3Q9UJ98 1225 aa10.26□□□□□ -0.77
CASC1-207ENST00000554533 SPDYE2BA6NHP3 402 aa10.25□□□□□ -0.77
CASC1-207ENST00000554533 NPM1P06748 294 aaKnown RBP eCLIP10.25□□□□□ -0.77
CASC1-207ENST00000554533 SPDYE6P0CI01 402 aa10.25□□□□□ -0.77
CASC1-207ENST00000554533 SPDYE2Q495Y8 402 aa10.25□□□□□ -0.77
CASC1-207ENST00000554533 PABPN1Q86U42 306 aaKnown RBP eCLIP10.23□□□□□ -0.77
CASC1-207ENST00000554533 PLCD3Q8N3E9 789 aa10.22□□□□□ -0.77
CASC1-207ENST00000554533 VSIG10Q8N0Z9 540 aa10.21□□□□□ -0.78
CASC1-207ENST00000554533 BBXQ8WY36 941 aaPredicted RBP10.21□□□□□ -0.78
CASC1-207ENST00000554533 RGL2O15211 777 aa10.2□□□□□ -0.78
CASC1-207ENST00000554533 POTEDQ86YR6 584 aa10.19□□□□□ -0.78
CASC1-207ENST00000554533 MIER1Q8N108 512 aa10.17□□□□□ -0.78
CASC1-207ENST00000554533 BCANQ96GW7 911 aa10.17□□□□□ -0.78
CASC1-207ENST00000554533 ZBTB4Q9P1Z0 1013 aaPredicted RBP10.16□□□□□ -0.78
CASC1-207ENST00000554533 PAXIP1Q6ZW49 1069 aaPredicted RBP10.15□□□□□ -0.78
CASC1-207ENST00000554533 KDM2AQ9Y2K7 1162 aa10.15□□□□□ -0.78
CASC1-207ENST00000554533 CFAP44Q96MT7 982 aa10.13□□□□□ -0.79
CASC1-207ENST00000554533 PRKCSHP14314 528 aaPredicted RBP10.11□□□□□ -0.79
CASC1-207ENST00000554533 CIZ1Q9ULV3 898 aaPredicted RBP10.07□□□□□ -0.8
CASC1-207ENST00000554533 TAOK2Q9UL54 1235 aa10.07□□□□□ -0.8
CASC1-207ENST00000554533 TSHZ2Q9NRE2 1034 aa10.03□□□□□ -0.8
CASC1-207ENST00000554533 CHGAP10645 457 aaKnown RBP10.03□□□□□ -0.8
CASC1-207ENST00000554533 SPRYD3Q8NCJ5 442 aa10.03□□□□□ -0.8
CASC1-207ENST00000554533 ZBTB47Q9UFB7 747 aaPredicted RBP10.01□□□□□ -0.81
CASC1-207ENST00000554533 PLEKHG5O94827 1062 aa10□□□□□ -0.81
CASC1-207ENST00000554533 RNF25Q96BH1 459 aaPredicted RBP9.95□□□□□ -0.82
CASC1-207ENST00000554533 TRIM41Q8WV44 630 aa9.94□□□□□ -0.82
CASC1-207ENST00000554533 TPRNQ4KMQ1 711 aa9.93□□□□□ -0.82
CASC1-207ENST00000554533 HS6ST3Q8IZP7 471 aa9.93□□□□□ -0.82
CASC1-207ENST00000554533 NUBP1P53384 320 aa9.91□□□□□ -0.82
CASC1-207ENST00000554533 GSE1Q14687 1217 aa9.87□□□□□ -0.83
CASC1-207ENST00000554533 DNAJC5Q9H3Z4 198 aa9.87□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 10.9 ms