RNA–Protein interactions for RNA: ENST00000538654.5

SNHG1-209, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 2

Gene SNHG1, Length 2,768 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-209ENST00000538654 CD28P10747 220 aa6.66□□□□□ -1.34
SNHG1-209ENST00000538654 CXCL5P42830 114 aa6.66□□□□□ -1.34
SNHG1-209ENST00000538654 FAM19A5Q7Z5A7 132 aaPredicted RBP6.66□□□□□ -1.34
SNHG1-209ENST00000538654 C5orf56Q8N8D9 126 aa6.66□□□□□ -1.34
SNHG1-209ENST00000538654 TRAV8-3A0A0A6YYJ7 113 aa6.65□□□□□ -1.34
SNHG1-209ENST00000538654 DEFB1P60022 68 aa6.65□□□□□ -1.34
SNHG1-209ENST00000538654 ADAMTSL4-AS1Q5T5F5 129 aa6.65□□□□□ -1.34
SNHG1-209ENST00000538654 UNQ9165/PRO28630Q6UXU0 137 aa6.65□□□□□ -1.34
SNHG1-209ENST00000538654 LINC00526Q96FQ7 95 aa6.65□□□□□ -1.34
SNHG1-209ENST00000538654 VSIG2Q96IQ7 327 aa6.65□□□□□ -1.34
SNHG1-209ENST00000538654 IGHV3-16A0A0C4DH30 117 aa6.65□□□□□ -1.35
SNHG1-209ENST00000538654 LY6HO94772 140 aa6.65□□□□□ -1.35
SNHG1-209ENST00000538654 HILS1P60008 231 aa6.65□□□□□ -1.35
SNHG1-209ENST00000538654 CD164Q04900 197 aa6.65□□□□□ -1.35
SNHG1-209ENST00000538654 LINC01560Q8TB33 94 aa6.65□□□□□ -1.35
SNHG1-209ENST00000538654 COPS9Q8WXC6 57 aa6.65□□□□□ -1.35
SNHG1-209ENST00000538654 ABCA4P78363 2273 aa6.65□□□□□ -1.35
SNHG1-209ENST00000538654 PRRC2AP48634 2157 aaKnown RBP6.64□□□□□ -1.35
SNHG1-209ENST00000538654 ADARB2-AS1A8MUL3 147 aa6.64□□□□□ -1.35
SNHG1-209ENST00000538654 CIRBPQ14011 172 aaKnown RBP6.64□□□□□ -1.35
SNHG1-209ENST00000538654 USMG5Q96IX5 58 aa6.64□□□□□ -1.35
SNHG1-209ENST00000538654 TRAV12-3A0A0B4J271 114 aa6.64□□□□□ -1.35
SNHG1-209ENST00000538654 A0A1B0GX51 115 aa6.64□□□□□ -1.35
SNHG1-209ENST00000538654 SAA4P35542 130 aa6.64□□□□□ -1.35
SNHG1-209ENST00000538654 DCANP1Q8TF63 244 aa6.64□□□□□ -1.35
SNHG1-209ENST00000538654 ZNF580Q9UK33 172 aa6.64□□□□□ -1.35
SNHG1-209ENST00000538654 MOB4Q9Y3A3 225 aa6.64□□□□□ -1.35
SNHG1-209ENST00000538654 H3BUA1 57 aa6.63□□□□□ -1.35
SNHG1-209ENST00000538654 J3KT08 172 aa6.63□□□□□ -1.35
SNHG1-209ENST00000538654 LOC400499M0QZD8 3231 aa6.63□□□□□ -1.35
SNHG1-209ENST00000538654 TRIOBPQ9H2D6 2365 aa6.63□□□□□ -1.35
SNHG1-209ENST00000538654 LINC00694P0DN24 101 aa6.63□□□□□ -1.35
SNHG1-209ENST00000538654 ZFP36P26651 326 aaKnown RBP6.63□□□□□ -1.35
SNHG1-209ENST00000538654 RHPN1-AS1Q9BWJ2 59 aa6.63□□□□□ -1.35
SNHG1-209ENST00000538654 EDA2RQ9HAV5 297 aa6.63□□□□□ -1.35
SNHG1-209ENST00000538654 PCNX1Q96RV3 2341 aa6.63□□□□□ -1.35
SNHG1-209ENST00000538654 COX7A2LO14548 114 aa6.63□□□□□ -1.35
SNHG1-209ENST00000538654 NPFFO15130 113 aa6.63□□□□□ -1.35
SNHG1-209ENST00000538654 SDIM1Q6ZPB5 146 aa6.63□□□□□ -1.35
SNHG1-209ENST00000538654 FBXL19-AS1Q494R0 122 aa6.62□□□□□ -1.35
SNHG1-209ENST00000538654 DAND5Q8N907 189 aa6.62□□□□□ -1.35
SNHG1-209ENST00000538654 CEP250Q9BV73 2442 aa6.62□□□□□ -1.35
SNHG1-209ENST00000538654 TRACP01848 142 aa6.62□□□□□ -1.35
SNHG1-209ENST00000538654 INAFM2P0DMQ5 153 aa6.62□□□□□ -1.35
SNHG1-209ENST00000538654 HERVK_113P63121 156 aa6.62□□□□□ -1.35
SNHG1-209ENST00000538654 C3orf56Q8N813 242 aa6.62□□□□□ -1.35
SNHG1-209ENST00000538654 DAZ1Q9NQZ3 744 aaKnown RBP6.62□□□□□ -1.35
SNHG1-209ENST00000538654 LINC00527Q9UJ94 153 aa6.62□□□□□ -1.35
SNHG1-209ENST00000538654 IGKV3-7A0A075B6H7 116 aa6.61□□□□□ -1.35
SNHG1-209ENST00000538654 LOC107984640A0A0U1RRK4 108 aa6.61□□□□□ -1.35
SNHG1-209ENST00000538654 NDUFA1O15239 70 aa6.61□□□□□ -1.35
SNHG1-209ENST00000538654 TRBV12-3P01733 135 aa6.61□□□□□ -1.35
SNHG1-209ENST00000538654 COX7CP15954 63 aa6.61□□□□□ -1.35
SNHG1-209ENST00000538654 APOC4P55056 127 aa6.61□□□□□ -1.35
SNHG1-209ENST00000538654 RPS28P62857 69 aaKnown RBP6.61□□□□□ -1.35
SNHG1-209ENST00000538654 DMXL2Q8TDJ6 3036 aa6.61□□□□□ -1.35
SNHG1-209ENST00000538654 CNOT1A5YKK6 2376 aaKnown RBP6.61□□□□□ -1.35
SNHG1-209ENST00000538654 IGHV1OR15-1A0A075B7D0 117 aa6.61□□□□□ -1.35
SNHG1-209ENST00000538654 NPC2P61916 151 aa6.61□□□□□ -1.35
SNHG1-209ENST00000538654 C11orf71Q6IPW1 123 aa6.61□□□□□ -1.35
SNHG1-209ENST00000538654 Q6ZSV7 163 aa6.61□□□□□ -1.35
SNHG1-209ENST00000538654 C5orf38Q86SI9 138 aa6.61□□□□□ -1.35
SNHG1-209ENST00000538654 SPENQ96T58 3664 aaKnown RBP6.61□□□□□ -1.35
SNHG1-209ENST00000538654 WDFY4Q6ZS81 3184 aa6.61□□□□□ -1.35
SNHG1-209ENST00000538654 ATOX1O00244 68 aa6.6□□□□□ -1.35
SNHG1-209ENST00000538654 FAM222AQ5U5X8 452 aa6.6□□□□□ -1.35
SNHG1-209ENST00000538654 CEMP1Q6PRD7 247 aaPredicted RBP6.6□□□□□ -1.35
SNHG1-209ENST00000538654 HRCT1Q6UXD1 115 aa6.6□□□□□ -1.35
SNHG1-209ENST00000538654 SMCR5Q8TEV8 140 aa6.6□□□□□ -1.35
SNHG1-209ENST00000538654 CRYGAP11844 174 aa6.59□□□□□ -1.35
SNHG1-209ENST00000538654 TMEM219Q86XT9 240 aa6.59□□□□□ -1.35
SNHG1-209ENST00000538654 KRTAP3-3Q9BYR6 98 aa6.59□□□□□ -1.35
SNHG1-209ENST00000538654 KRTAP3-2Q9BYR7 98 aa6.59□□□□□ -1.35
SNHG1-209ENST00000538654 DAZ2Q13117 558 aaKnown RBP6.59□□□□□ -1.35
SNHG1-209ENST00000538654 GAGE2AQ6NT46 116 aa6.59□□□□□ -1.35
SNHG1-209ENST00000538654 DAZ4Q86SG3 579 aaKnown RBP6.59□□□□□ -1.35
SNHG1-209ENST00000538654 FAM104AQ969W3 186 aa6.59□□□□□ -1.35
SNHG1-209ENST00000538654 DAZ3Q9NR90 486 aaKnown RBP6.59□□□□□ -1.35
SNHG1-209ENST00000538654 PIEZO2Q9H5I5 2752 aa6.59□□□□□ -1.35
SNHG1-209ENST00000538654 SMG1Q96Q15 3661 aaKnown RBP6.58□□□□□ -1.36
SNHG1-209ENST00000538654 PLA2G1BP04054 148 aaKnown RBP6.58□□□□□ -1.36
SNHG1-209ENST00000538654 LINC00308Q8TCZ7 52 aa6.58□□□□□ -1.36
SNHG1-209ENST00000538654 APC2O95996 2303 aa6.58□□□□□ -1.36
SNHG1-209ENST00000538654 TACC2O95359 2948 aa6.58□□□□□ -1.36
SNHG1-209ENST00000538654 DCHS1Q96JQ0 3298 aa6.58□□□□□ -1.36
SNHG1-209ENST00000538654 BAALC-AS2P0C853 105 aa6.58□□□□□ -1.36
SNHG1-209ENST00000538654 SNRPD3P62318 126 aaKnown RBP6.58□□□□□ -1.36
SNHG1-209ENST00000538654 ZFHX4Q86UP3 3567 aa6.58□□□□□ -1.36
SNHG1-209ENST00000538654 UBE2D4Q9Y2X8 147 aa6.57□□□□□ -1.36
SNHG1-209ENST00000538654 IGLV5-45A0A087WSX0 123 aa6.57□□□□□ -1.36
SNHG1-209ENST00000538654 IGHV3-11P01762 117 aa6.57□□□□□ -1.36
SNHG1-209ENST00000538654 HIST1H4AP62805 103 aaKnown RBP6.57□□□□□ -1.36
SNHG1-209ENST00000538654 PRORYQ9H606 182 aa6.57□□□□□ -1.36
SNHG1-209ENST00000538654 OVOL2Q9BRP0 275 aa6.57□□□□□ -1.36
SNHG1-209ENST00000538654 TRAV12-2A0A075B6T6 113 aa6.56□□□□□ -1.36
SNHG1-209ENST00000538654 A0A0U1RQV1 116 aa6.56□□□□□ -1.36
SNHG1-209ENST00000538654 BEAN1Q3B7T3 259 aa6.56□□□□□ -1.36
SNHG1-209ENST00000538654 MAP1BP46821 2468 aaKnown RBP6.55□□□□□ -1.36
SNHG1-209ENST00000538654 IGHG2P01859 326 aa6.55□□□□□ -1.36
SNHG1-209ENST00000538654 RNASE13Q5GAN3 156 aaKnown RBP6.55□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 98.1 ms