RNA–Protein interactions for RNA: ENST00000525214.1

COPB1-203, Transcript of coatomer protein complex subunit beta 1, humanhuman

TSL 2

Gene COPB1, Length 566 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPB1-203ENST00000525214 LENEPQ9Y5L5 61 aa0.72□□□□□ -2.29
COPB1-203ENST00000525214 DOCK2Q92608 1830 aa0.72□□□□□ -2.29
COPB1-203ENST00000525214 ZFYVE16Q7Z3T8 1539 aa0.72□□□□□ -2.29
COPB1-203ENST00000525214 ARAP2Q8WZ64 1704 aa0.72□□□□□ -2.29
COPB1-203ENST00000525214 C10orf71Q711Q0 1435 aa0.72□□□□□ -2.29
COPB1-203ENST00000525214 ASH1LQ9NR48 2969 aaKnown RBP0.72□□□□□ -2.29
COPB1-203ENST00000525214 TCHHQ07283 1943 aa0.72□□□□□ -2.29
COPB1-203ENST00000525214 MAP2P11137 1827 aaKnown RBP0.71□□□□□ -2.3
COPB1-203ENST00000525214 LAMA4Q16363 1823 aa0.71□□□□□ -2.3
COPB1-203ENST00000525214 A0A087WTM6 91 aa0.71□□□□□ -2.3
COPB1-203ENST00000525214 CLPSL1A2RUU4 121 aa0.71□□□□□ -2.3
COPB1-203ENST00000525214 TMEM262E9PQX1 116 aa0.71□□□□□ -2.3
COPB1-203ENST00000525214 F2Z2F3 143 aa0.71□□□□□ -2.3
COPB1-203ENST00000525214 SPINT3P49223 89 aa0.71□□□□□ -2.3
COPB1-203ENST00000525214 SPINK9Q5DT21 86 aa0.71□□□□□ -2.3
COPB1-203ENST00000525214 NCMAPQ5T1S8 102 aa0.71□□□□□ -2.3
COPB1-203ENST00000525214 BPESC1Q9GZL8 116 aa0.71□□□□□ -2.3
COPB1-203ENST00000525214 LINC00474Q9P2X8 69 aa0.71□□□□□ -2.3
COPB1-203ENST00000525214 R4GMQ9 66 aa0.71□□□□□ -2.3
COPB1-203ENST00000525214 TNS1Q9HBL0 1735 aaKnown RBP0.71□□□□□ -2.3
COPB1-203ENST00000525214 ROBO1Q9Y6N7 1651 aa0.71□□□□□ -2.3
COPB1-203ENST00000525214 CNTLNQ9NXG0 1405 aa0.71□□□□□ -2.3
COPB1-203ENST00000525214 PSME4Q14997 1843 aa0.71□□□□□ -2.3
COPB1-203ENST00000525214 CCNB3Q8WWL7 1395 aa0.7□□□□□ -2.3
COPB1-203ENST00000525214 ARHGAP5Q13017 1502 aa0.7□□□□□ -2.3
COPB1-203ENST00000525214 M0R143 59 aa0.7□□□□□ -2.3
COPB1-203ENST00000525214 SNCAP37840 140 aa0.7□□□□□ -2.3
COPB1-203ENST00000525214 S100A10P60903 97 aa0.7□□□□□ -2.3
COPB1-203ENST00000525214 MGST2Q99735 147 aa0.7□□□□□ -2.3
COPB1-203ENST00000525214 WFDC6Q9BQY6 131 aa0.7□□□□□ -2.3
COPB1-203ENST00000525214 CDK13Q14004 1512 aaKnown RBP0.69□□□□□ -2.3
COPB1-203ENST00000525214 GOLGA4Q13439 2230 aaKnown RBP0.69□□□□□ -2.3
COPB1-203ENST00000525214 TRBV7-3A0A075B6L6 115 aa0.69□□□□□ -2.3
COPB1-203ENST00000525214 LOC285095A0A1B0GVY8 99 aa0.69□□□□□ -2.3
COPB1-203ENST00000525214 NAP1L6A6NFF2 107 aa0.69□□□□□ -2.3
COPB1-203ENST00000525214 LY6G6CO95867 125 aa0.69□□□□□ -2.3
COPB1-203ENST00000525214 PPP1R17O96001 155 aa0.69□□□□□ -2.3
COPB1-203ENST00000525214 ACYP2P14621 99 aa0.69□□□□□ -2.3
COPB1-203ENST00000525214 ZNF137PP52743 207 aa0.69□□□□□ -2.3
COPB1-203ENST00000525214 KRTDAPP60985 99 aa0.69□□□□□ -2.3
COPB1-203ENST00000525214 Q5VV11 94 aa0.69□□□□□ -2.3
COPB1-203ENST00000525214 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa0.69□□□□□ -2.3
COPB1-203ENST00000525214 BAGE3Q86Y29 109 aa0.69□□□□□ -2.3
COPB1-203ENST00000525214 SMIM11BQ8TCY0 68 aa0.69□□□□□ -2.3
COPB1-203ENST00000525214 TSLPQ969D9 159 aa0.69□□□□□ -2.3
COPB1-203ENST00000525214 Q96NJ1 140 aa0.69□□□□□ -2.3
COPB1-203ENST00000525214 DYNLRB1Q9NP97 96 aa0.69□□□□□ -2.3
COPB1-203ENST00000525214 AP4S1Q9Y587 144 aa0.69□□□□□ -2.3
COPB1-203ENST00000525214 SIPA1L3O60292 1781 aaPredicted RBP0.69□□□□□ -2.3
COPB1-203ENST00000525214 SPHKAPQ2M3C7 1700 aa0.69□□□□□ -2.3
COPB1-203ENST00000525214 CACNA1CQ13936 2221 aa0.68□□□□□ -2.3
COPB1-203ENST00000525214 F8P00451 2351 aa0.68□□□□□ -2.3
COPB1-203ENST00000525214 TMEM14DPA8MWL7 114 aa0.68□□□□□ -2.3
COPB1-203ENST00000525214 CCL18P55774 89 aa0.68□□□□□ -2.3
COPB1-203ENST00000525214 GNG11P61952 73 aa0.68□□□□□ -2.3
COPB1-203ENST00000525214 SPAG11BQ08648 103 aa0.68□□□□□ -2.3
COPB1-203ENST00000525214 SPAG11AQ6PDA7 123 aa0.68□□□□□ -2.3
COPB1-203ENST00000525214 VMO1Q7Z5L0 202 aa0.68□□□□□ -2.3
COPB1-203ENST00000525214 AMELXQ99217 191 aa0.68□□□□□ -2.3
COPB1-203ENST00000525214 SCAPERQ9BY12 1400 aa0.68□□□□□ -2.3
COPB1-203ENST00000525214 PLCE1Q9P212 2302 aa0.68□□□□□ -2.3
COPB1-203ENST00000525214 UQCR10Q9UDW1 63 aa0.68□□□□□ -2.3
COPB1-203ENST00000525214 SHROOM2Q13796 1616 aa0.67□□□□□ -2.3
COPB1-203ENST00000525214 TANC1Q9C0D5 1861 aa0.67□□□□□ -2.3
COPB1-203ENST00000525214 TRGV1A0A0A0MS02 117 aa0.67□□□□□ -2.3
COPB1-203ENST00000525214 TRAV1-2A0A0B4J238 106 aa0.67□□□□□ -2.3
COPB1-203ENST00000525214 MPC2O95563 127 aa0.67□□□□□ -2.3
COPB1-203ENST00000525214 LINC00032P0C843 101 aa0.67□□□□□ -2.3
COPB1-203ENST00000525214 PKIAP61925 76 aa0.67□□□□□ -2.3
COPB1-203ENST00000525214 C6orf52Q5T4I8 152 aa0.67□□□□□ -2.3
COPB1-203ENST00000525214 SMIM4Q8WVI0 70 aa0.67□□□□□ -2.3
COPB1-203ENST00000525214 FAM167A-AS1Q96KT0 104 aa0.67□□□□□ -2.3
COPB1-203ENST00000525214 PRR15LQ9BU68 103 aa0.67□□□□□ -2.3
COPB1-203ENST00000525214 V9GYH0 126 aa0.67□□□□□ -2.3
COPB1-203ENST00000525214 LOC285556D6RIA3 1793 aa0.67□□□□□ -2.3
COPB1-203ENST00000525214 MYO7BQ6PIF6 2116 aa0.67□□□□□ -2.3
COPB1-203ENST00000525214 MRC1P22897 1456 aa0.67□□□□□ -2.3
COPB1-203ENST00000525214 GVQW2A0A096LPI5 108 aaPredicted RBP0.66□□□□□ -2.3
COPB1-203ENST00000525214 NDUFA4L2Q9NRX3 87 aa0.66□□□□□ -2.3
COPB1-203ENST00000525214 DNAJC13O75165 2243 aa0.66□□□□□ -2.3
COPB1-203ENST00000525214 PRDM2Q13029 1718 aa0.66□□□□□ -2.3
COPB1-203ENST00000525214 FYCO1Q9BQS8 1478 aa0.66□□□□□ -2.3
COPB1-203ENST00000525214 SMARCA2P51531 1590 aa0.66□□□□□ -2.3
COPB1-203ENST00000525214 CACNA1HO95180 2353 aa0.65□□□□□ -2.3
COPB1-203ENST00000525214 hADV29S1A0JD25 119 aa0.65□□□□□ -2.31
COPB1-203ENST00000525214 CHKB-CPT1BH3BT56 60 aa0.65□□□□□ -2.31
COPB1-203ENST00000525214 M0R135 149 aa0.65□□□□□ -2.31
COPB1-203ENST00000525214 GNGT2O14610 69 aa0.65□□□□□ -2.31
COPB1-203ENST00000525214 UQCR11O14957 56 aa0.65□□□□□ -2.31
COPB1-203ENST00000525214 PIN1P1O15428 100 aa0.65□□□□□ -2.31
COPB1-203ENST00000525214 NDUFC1O43677 76 aa0.65□□□□□ -2.31
COPB1-203ENST00000525214 APOC3P02656 99 aa0.65□□□□□ -2.31
COPB1-203ENST00000525214 MT-ATP8P03928 68 aa0.65□□□□□ -2.31
COPB1-203ENST00000525214 COX6CP09669 75 aa0.65□□□□□ -2.31
COPB1-203ENST00000525214 GCHFRP30047 84 aa0.65□□□□□ -2.31
COPB1-203ENST00000525214 COX17Q14061 63 aa0.65□□□□□ -2.31
COPB1-203ENST00000525214 COL5A1-AS1Q5SY13 56 aa0.65□□□□□ -2.31
COPB1-203ENST00000525214 TMEM170BQ5T4T1 132 aa0.65□□□□□ -2.31
COPB1-203ENST00000525214 Q6ZRX8 168 aa0.65□□□□□ -2.31
COPB1-203ENST00000525214 FAM213BQ8TBF2 198 aa0.65□□□□□ -2.31
Retrieved 100 of 20,778 RNA–protein pairs in 197.9 ms