RNA–Protein interactions for RNA: ENST00000493919.5

BRCA1-222, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 2

Gene BRCA1, Length 1,948 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-222ENST00000493919 EEF1AKMT3Q96AZ1 226 aa8.69□□□□□ -1.02
BRCA1-222ENST00000493919 TRRAPQ9Y4A5 3859 aa8.69□□□□□ -1.02
BRCA1-222ENST00000493919 MRPS12O15235 138 aaKnown RBP8.68□□□□□ -1.02
BRCA1-222ENST00000493919 ATP6V0E1O15342 81 aa8.68□□□□□ -1.02
BRCA1-222ENST00000493919 IGLV2-23P01705 113 aa8.68□□□□□ -1.02
BRCA1-222ENST00000493919 SAA1P0DJI8 122 aaPredicted RBP8.68□□□□□ -1.02
BRCA1-222ENST00000493919 C10orf99Q6UWK7 81 aa8.68□□□□□ -1.02
BRCA1-222ENST00000493919 TM2D3Q9BRN9 247 aa8.68□□□□□ -1.02
BRCA1-222ENST00000493919 PAXXQ9BUH6 204 aa8.68□□□□□ -1.02
BRCA1-222ENST00000493919 IGHV7-81A0A0B4J1V7 117 aa8.68□□□□□ -1.02
BRCA1-222ENST00000493919 SRRM4A7MD48 611 aaKnown RBP8.68□□□□□ -1.02
BRCA1-222ENST00000493919 NDPQ00604 133 aa8.68□□□□□ -1.02
BRCA1-222ENST00000493919 ATXN8Q156A1 80 aa8.68□□□□□ -1.02
BRCA1-222ENST00000493919 ECSCRQ19T08 205 aa8.68□□□□□ -1.02
BRCA1-222ENST00000493919 HBDP02042 147 aa8.67□□□□□ -1.02
BRCA1-222ENST00000493919 BRWD1-AS2P59051 145 aa8.67□□□□□ -1.02
BRCA1-222ENST00000493919 OR8A1Q8NGG7 326 aa8.67□□□□□ -1.02
BRCA1-222ENST00000493919 PLXNB1O43157 2135 aa8.66□□□□□ -1.02
BRCA1-222ENST00000493919 CD28P10747 220 aa8.66□□□□□ -1.02
BRCA1-222ENST00000493919 SNRPD3P62318 126 aaKnown RBP8.66□□□□□ -1.02
BRCA1-222ENST00000493919 TMEM243Q9BU79 118 aa8.66□□□□□ -1.02
BRCA1-222ENST00000493919 FXYD3Q14802 87 aa8.66□□□□□ -1.02
BRCA1-222ENST00000493919 METTL26Q96S19 204 aa8.66□□□□□ -1.02
BRCA1-222ENST00000493919 LSM4Q9Y4Z0 139 aaKnown RBP8.66□□□□□ -1.02
BRCA1-222ENST00000493919 VWFP04275 2813 aa8.65□□□□□ -1.02
BRCA1-222ENST00000493919 TET2Q6N021 2002 aaPredicted RBP8.65□□□□□ -1.02
BRCA1-222ENST00000493919 TRAV41A0A0B4J266 112 aa8.65□□□□□ -1.02
BRCA1-222ENST00000493919 G3V318 75 aa8.65□□□□□ -1.02
BRCA1-222ENST00000493919 NSUN5P1Q3KNT7 163 aa8.65□□□□□ -1.02
BRCA1-222ENST00000493919 TEX49A0A1B0GTD5 131 aa8.64□□□□□ -1.03
BRCA1-222ENST00000493919 APELAP0DMC3 54 aa8.64□□□□□ -1.03
BRCA1-222ENST00000493919 FCER1GP30273 86 aa8.64□□□□□ -1.03
BRCA1-222ENST00000493919 C10orf55Q5SWW7 151 aa8.64□□□□□ -1.03
BRCA1-222ENST00000493919 KTN1-AS1Q86SY8 53 aa8.64□□□□□ -1.03
BRCA1-222ENST00000493919 NPCDR1Q9BY65 106 aa8.64□□□□□ -1.03
BRCA1-222ENST00000493919 ZNF492Q9P255 531 aa8.64□□□□□ -1.03
BRCA1-222ENST00000493919 IGKV2D-26A0A0A0MRZ7 120 aa8.64□□□□□ -1.03
BRCA1-222ENST00000493919 TWIST1Q15672 202 aa8.64□□□□□ -1.03
BRCA1-222ENST00000493919 PVRIGQ6DKI7 326 aa8.64□□□□□ -1.03
BRCA1-222ENST00000493919 PKD1L1Q8TDX9 2849 aa8.64□□□□□ -1.03
BRCA1-222ENST00000493919 LYRM9A8MSI8 78 aa8.63□□□□□ -1.03
BRCA1-222ENST00000493919 SMKR1H3BMG3 65 aa8.63□□□□□ -1.03
BRCA1-222ENST00000493919 LGALS3P17931 250 aaKnown RBP8.63□□□□□ -1.03
BRCA1-222ENST00000493919 H3BP45 60 aa8.62□□□□□ -1.03
BRCA1-222ENST00000493919 MRGPRG-AS1Q2M3A8 158 aa8.62□□□□□ -1.03
BRCA1-222ENST00000493919 NDUFA11Q86Y39 141 aa8.62□□□□□ -1.03
BRCA1-222ENST00000493919 PRSS3P2Q8NHM4 247 aa8.62□□□□□ -1.03
BRCA1-222ENST00000493919 GFRA4Q9GZZ7 299 aa8.62□□□□□ -1.03
BRCA1-222ENST00000493919 TRAV3A0A0B4J244 114 aa8.62□□□□□ -1.03
BRCA1-222ENST00000493919 A0A0B4J2C4 111 aa8.62□□□□□ -1.03
BRCA1-222ENST00000493919 IGLV2-8P01709 118 aa8.62□□□□□ -1.03
BRCA1-222ENST00000493919 EGR2P11161 476 aaPredicted RBP8.62□□□□□ -1.03
BRCA1-222ENST00000493919 TMEM167AQ8TBQ9 72 aa8.62□□□□□ -1.03
BRCA1-222ENST00000493919 TNCP24821 2201 aa8.62□□□□□ -1.03
BRCA1-222ENST00000493919 CMYA5Q8N3K9 4069 aa8.61□□□□□ -1.03
BRCA1-222ENST00000493919 C8orf87E5RJ46 101 aa8.61□□□□□ -1.03
BRCA1-222ENST00000493919 ARL14EPLP0DKL9 152 aa8.61□□□□□ -1.03
BRCA1-222ENST00000493919 ZNF355PQ9NSJ1 428 aa8.61□□□□□ -1.03
BRCA1-222ENST00000493919 ZNF580Q9UK33 172 aa8.61□□□□□ -1.03
BRCA1-222ENST00000493919 TIMM17BO60830 172 aa8.6□□□□□ -1.03
BRCA1-222ENST00000493919 IGKV1-39P01597 117 aa8.6□□□□□ -1.03
BRCA1-222ENST00000493919 IGKV1D-39P04432 117 aa8.6□□□□□ -1.03
BRCA1-222ENST00000493919 RPL27AP46776 148 aaKnown RBP8.6□□□□□ -1.03
BRCA1-222ENST00000493919 CRIP2P52943 208 aaPredicted RBP8.6□□□□□ -1.03
BRCA1-222ENST00000493919 MIC13Q5XKP0 118 aa8.6□□□□□ -1.03
BRCA1-222ENST00000493919 KLHL30-AS1Q8NEE0 82 aa8.6□□□□□ -1.03
BRCA1-222ENST00000493919 HIGD1CA8MV81 97 aa8.6□□□□□ -1.03
BRCA1-222ENST00000493919 NDUFS5O43920 106 aa8.6□□□□□ -1.03
BRCA1-222ENST00000493919 SUB1P53999 127 aaKnown RBP eCLIP8.6□□□□□ -1.03
BRCA1-222ENST00000493919 KLK15Q9H2R5 256 aa8.6□□□□□ -1.03
BRCA1-222ENST00000493919 A0A096LNJ9 63 aa8.59□□□□□ -1.03
BRCA1-222ENST00000493919 K7EMI3 77 aa8.59□□□□□ -1.03
BRCA1-222ENST00000493919 FHL2Q14192 279 aa8.59□□□□□ -1.03
BRCA1-222ENST00000493919 C19orf54Q5BKX5 351 aa8.59□□□□□ -1.03
BRCA1-222ENST00000493919 SCGB1D4Q6XE38 83 aa8.59□□□□□ -1.03
BRCA1-222ENST00000493919 C18orf65Q6ZTR6 163 aa8.59□□□□□ -1.03
BRCA1-222ENST00000493919 TMEM167BQ9NRX6 74 aa8.59□□□□□ -1.03
BRCA1-222ENST00000493919 WDR83OSQ9Y284 106 aa8.59□□□□□ -1.03
BRCA1-222ENST00000493919 TRBV7-1A0A0A6YYK4 115 aa8.58□□□□□ -1.04
BRCA1-222ENST00000493919 ADARB2-AS1A8MUL3 147 aa8.58□□□□□ -1.04
BRCA1-222ENST00000493919 E7EUB6 86 aa8.58□□□□□ -1.04
BRCA1-222ENST00000493919 IGLV1-40P01703 118 aa8.58□□□□□ -1.04
BRCA1-222ENST00000493919 C2orf82Q6UX34 121 aa8.58□□□□□ -1.04
BRCA1-222ENST00000493919 WNK1Q9H4A3 2382 aa8.58□□□□□ -1.04
BRCA1-222ENST00000493919 IGKV1-5P01602 117 aa8.58□□□□□ -1.04
BRCA1-222ENST00000493919 DEFB136Q30KP8 78 aa8.58□□□□□ -1.04
BRCA1-222ENST00000493919 DCANP1Q8TF63 244 aa8.58□□□□□ -1.04
BRCA1-222ENST00000493919 SLC50A1Q9BRV3 221 aa8.58□□□□□ -1.04
BRCA1-222ENST00000493919 WI2-2373I1.2A0A1W2PRP0 233 aa8.57□□□□□ -1.04
BRCA1-222ENST00000493919 TRGV3P03979 118 aa8.57□□□□□ -1.04
BRCA1-222ENST00000493919 RNASE2P10153 161 aaKnown RBP8.57□□□□□ -1.04
BRCA1-222ENST00000493919 DAD1P61803 113 aa8.57□□□□□ -1.04
BRCA1-222ENST00000493919 C11orf68Q9H3H3 251 aaKnown RBP8.57□□□□□ -1.04
BRCA1-222ENST00000493919 PRO1854Q9UHT4 67 aa8.57□□□□□ -1.04
BRCA1-222ENST00000493919 MGAM2Q2M2H8 2515 aa8.57□□□□□ -1.04
BRCA1-222ENST00000493919 NBEAL1Q6ZS30 2694 aa8.57□□□□□ -1.04
BRCA1-222ENST00000493919 A0A0G2JRQ6 117 aa8.56□□□□□ -1.04
BRCA1-222ENST00000493919 IGHV3-11P01762 117 aa8.56□□□□□ -1.04
BRCA1-222ENST00000493919 SS18Q15532 418 aa8.56□□□□□ -1.04
BRCA1-222ENST00000493919 DKK2Q9UBU2 259 aa8.56□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 49.7 ms