RNA–Protein interactions for RNA: ENST00000493199.1

NEK4-205, Transcript of NIMA related kinase 4, humanhuman

TSL 3

Gene NEK4, Length 355 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK4-205ENST00000493199 NEXN-AS1Q8NBZ9 246 aa3.76□□□□□ -1.81
NEK4-205ENST00000493199 CHCHD5Q9BSY4 110 aa3.76□□□□□ -1.81
NEK4-205ENST00000493199 TMEM243Q9BU79 118 aa3.76□□□□□ -1.81
NEK4-205ENST00000493199 SMIM2Q9BVW6 85 aa3.76□□□□□ -1.81
NEK4-205ENST00000493199 HSPB8Q9UJY1 196 aa3.76□□□□□ -1.81
NEK4-205ENST00000493199 CELA1Q9UNI1 258 aa3.76□□□□□ -1.81
NEK4-205ENST00000493199 TRBV6-8A0A0A6YYG3 113 aa3.75□□□□□ -1.81
NEK4-205ENST00000493199 TRAV26-2A0A0B4J265 109 aa3.75□□□□□ -1.81
NEK4-205ENST00000493199 HBDP02042 147 aa3.75□□□□□ -1.81
NEK4-205ENST00000493199 POLR2KP53803 58 aaKnown RBP3.75□□□□□ -1.81
NEK4-205ENST00000493199 LINC00315P59091 139 aa3.75□□□□□ -1.81
NEK4-205ENST00000493199 UBE2D3P61077 147 aa3.75□□□□□ -1.81
NEK4-205ENST00000493199 UBE2D2P62837 147 aa3.75□□□□□ -1.81
NEK4-205ENST00000493199 TTC32Q5I0X7 151 aa3.75□□□□□ -1.81
NEK4-205ENST00000493199 LELP1Q5T871 98 aa3.75□□□□□ -1.81
NEK4-205ENST00000493199 RNASEKQ6P5S7 137 aaKnown RBP3.75□□□□□ -1.81
NEK4-205ENST00000493199 NIT1Q86X76 327 aa3.75□□□□□ -1.81
NEK4-205ENST00000493199 ZNF575Q86XF7 245 aa3.75□□□□□ -1.81
NEK4-205ENST00000493199 RMI2Q96E14 147 aa3.75□□□□□ -1.81
NEK4-205ENST00000493199 RNF185Q96GF1 192 aa3.75□□□□□ -1.81
NEK4-205ENST00000493199 TMEM141Q96I45 108 aa3.75□□□□□ -1.81
NEK4-205ENST00000493199 PACRGQ96M98 296 aaPredicted RBP3.75□□□□□ -1.81
NEK4-205ENST00000493199 YPEL4Q96NS1 127 aa3.75□□□□□ -1.81
NEK4-205ENST00000493199 COX11Q9Y6N1 276 aa3.75□□□□□ -1.81
NEK4-205ENST00000493199 C20orf202A1L168 122 aa3.74□□□□□ -1.81
NEK4-205ENST00000493199 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP3.74□□□□□ -1.81
NEK4-205ENST00000493199 LEPROTL1O95214 131 aa3.74□□□□□ -1.81
NEK4-205ENST00000493199 NPYP01303 97 aa3.74□□□□□ -1.81
NEK4-205ENST00000493199 CRPP02741 224 aa3.74□□□□□ -1.81
NEK4-205ENST00000493199 HOXA5P20719 270 aa3.74□□□□□ -1.81
NEK4-205ENST00000493199 NDUFA6P56556 154 aa3.74□□□□□ -1.81
NEK4-205ENST00000493199 IQCJQ1A5X6 159 aa3.74□□□□□ -1.81
NEK4-205ENST00000493199 OR5A1Q8NGJ0 315 aa3.74□□□□□ -1.81
NEK4-205ENST00000493199 C18orf32Q8TCD1 76 aa3.74□□□□□ -1.81
NEK4-205ENST00000493199 C2orf88Q9BSF0 95 aa3.74□□□□□ -1.81
NEK4-205ENST00000493199 MAP1LC3CQ9BXW4 147 aa3.74□□□□□ -1.81
NEK4-205ENST00000493199 COL7A1Q02388 2944 aa3.74□□□□□ -1.81
NEK4-205ENST00000493199 A0A096LPF7 62 aa3.73□□□□□ -1.81
NEK4-205ENST00000493199 IGHV3-38A0A0C4DH36 116 aa3.73□□□□□ -1.81
NEK4-205ENST00000493199 A0A1B0GUV1 79 aa3.73□□□□□ -1.81
NEK4-205ENST00000493199 SMKR1H3BMG3 65 aa3.73□□□□□ -1.81
NEK4-205ENST00000493199 SIVA1O15304 175 aa3.73□□□□□ -1.81
NEK4-205ENST00000493199 HIST1H2BKO60814 126 aa3.73□□□□□ -1.81
NEK4-205ENST00000493199 HIST1H2BJP06899 126 aa3.73□□□□□ -1.81
NEK4-205ENST00000493199 PRSS1P07477 247 aa3.73□□□□□ -1.81
NEK4-205ENST00000493199 HIST1H2BOP23527 126 aa3.73□□□□□ -1.81
NEK4-205ENST00000493199 HIST1H2BBP33778 126 aa3.73□□□□□ -1.81
NEK4-205ENST00000493199 HIST1H2BDP58876 126 aa3.73□□□□□ -1.81
NEK4-205ENST00000493199 HIST1H2BCP62807 126 aa3.73□□□□□ -1.81
NEK4-205ENST00000493199 HIST2H2BEQ16778 126 aa3.73□□□□□ -1.81
NEK4-205ENST00000493199 HIST2H2BFQ5QNW6 126 aaPredicted RBP3.73□□□□□ -1.81
NEK4-205ENST00000493199 LYPD5Q6UWN5 251 aa3.73□□□□□ -1.81
NEK4-205ENST00000493199 C2orf66Q6UXQ4 117 aa3.73□□□□□ -1.81
NEK4-205ENST00000493199 ERASQ7Z444 233 aa3.73□□□□□ -1.81
NEK4-205ENST00000493199 NRACQ8N912 160 aa3.73□□□□□ -1.81
NEK4-205ENST00000493199 HIST1H2BHQ93079 126 aa3.73□□□□□ -1.81
NEK4-205ENST00000493199 RPL39LQ96EH5 51 aaKnown RBP3.73□□□□□ -1.81
NEK4-205ENST00000493199 VSIG2Q96IQ7 327 aa3.73□□□□□ -1.81
NEK4-205ENST00000493199 SCGB3A1Q96QR1 104 aa3.73□□□□□ -1.81
NEK4-205ENST00000493199 HIST1H2BNQ99877 126 aa3.73□□□□□ -1.81
NEK4-205ENST00000493199 HIST1H2BMQ99879 126 aa3.73□□□□□ -1.81
NEK4-205ENST00000493199 TIMM21Q9BVV7 248 aa3.73□□□□□ -1.81
NEK4-205ENST00000493199 VCX2Q9H322 139 aa3.73□□□□□ -1.81
NEK4-205ENST00000493199 SPANXA1Q9NS26 97 aa3.73□□□□□ -1.81
NEK4-205ENST00000493199 CSDC2Q9Y534 153 aaKnown RBP3.73□□□□□ -1.81
NEK4-205ENST00000493199 MUC4Q99102 2169 aa3.73□□□□□ -1.81
NEK4-205ENST00000493199 TRAV8-3A0A0A6YYJ7 113 aa3.72□□□□□ -1.81
NEK4-205ENST00000493199 TRAV8-4A0A0B4J246 113 aa3.72□□□□□ -1.81
NEK4-205ENST00000493199 SS18Q15532 418 aa3.72□□□□□ -1.81
NEK4-205ENST00000493199 TEX43Q6ZNM6 134 aa3.72□□□□□ -1.81
NEK4-205ENST00000493199 NFE4Q86UQ8 179 aa3.72□□□□□ -1.81
NEK4-205ENST00000493199 C20orf203Q8NBC4 194 aa3.72□□□□□ -1.81
NEK4-205ENST00000493199 TIMM17AQ99595 171 aa3.72□□□□□ -1.81
NEK4-205ENST00000493199 TM2D2Q9BX73 214 aa3.72□□□□□ -1.81
NEK4-205ENST00000493199 MRPS16Q9Y3D3 137 aaKnown RBP3.72□□□□□ -1.81
NEK4-205ENST00000493199 PYGO1Q9Y3Y4 419 aa3.72□□□□□ -1.81
NEK4-205ENST00000493199 SERF1AO75920 110 aa3.71□□□□□ -1.82
NEK4-205ENST00000493199 ANGP03950 147 aaKnown RBP3.71□□□□□ -1.82
NEK4-205ENST00000493199 ESDP10768 282 aa3.71□□□□□ -1.82
NEK4-205ENST00000493199 COA6Q5JTJ3 125 aaKnown RBP3.71□□□□□ -1.82
NEK4-205ENST00000493199 LCE2CQ5TA81 110 aa3.71□□□□□ -1.82
NEK4-205ENST00000493199 LGALS9CQ6DKI2 356 aa3.71□□□□□ -1.82
NEK4-205ENST00000493199 Q6ZSN1 163 aa3.71□□□□□ -1.82
NEK4-205ENST00000493199 MRPL52Q86TS9 123 aaKnown RBP3.71□□□□□ -1.82
NEK4-205ENST00000493199 TOMM6Q96B49 74 aa3.71□□□□□ -1.82
NEK4-205ENST00000493199 UPK3BQ9BT76 320 aa3.71□□□□□ -1.82
NEK4-205ENST00000493199 Q9H8V8 135 aa3.71□□□□□ -1.82
NEK4-205ENST00000493199 LOC100131303A0A0U1RQF7 123 aa3.7□□□□□ -1.82
NEK4-205ENST00000493199 LINC01546A6NGU7 62 aa3.7□□□□□ -1.82
NEK4-205ENST00000493199 HSBP1L1C9JCN9 74 aa3.7□□□□□ -1.82
NEK4-205ENST00000493199 H3BRM9 83 aa3.7□□□□□ -1.82
NEK4-205ENST00000493199 APOMO95445 188 aa3.7□□□□□ -1.82
NEK4-205ENST00000493199 TSHBP01222 138 aa3.7□□□□□ -1.82
NEK4-205ENST00000493199 FGF6P10767 208 aa3.7□□□□□ -1.82
NEK4-205ENST00000493199 GCSHP23434 173 aa3.7□□□□□ -1.82
NEK4-205ENST00000493199 SNRPEP62304 92 aaKnown RBP3.7□□□□□ -1.82
NEK4-205ENST00000493199 MRPS36P82909 103 aaKnown RBP3.7□□□□□ -1.82
NEK4-205ENST00000493199 PMVKQ15126 192 aa3.7□□□□□ -1.82
NEK4-205ENST00000493199 MIAQ16674 131 aa3.7□□□□□ -1.82
NEK4-205ENST00000493199 ZFAND6Q6FIF0 208 aa3.7□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms