RNA–Protein interactions for RNA: ENST00000490163.5

UBXN4-208, Transcript of UBX domain protein 4, humanhuman

TSL 2

Gene UBXN4, Length 3,394 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN4-208ENST00000490163 DAD1P61803 113 aa1.87□□□□□ -2.11
UBXN4-208ENST00000490163 PLGLAQ15195 96 aa1.87□□□□□ -2.11
UBXN4-208ENST00000490163 C2orf83Q53S99 150 aa1.87□□□□□ -2.11
UBXN4-208ENST00000490163 FAM27BQ5VT28 67 aa1.87□□□□□ -2.11
UBXN4-208ENST00000490163 LYZL1Q6UWQ5 148 aa1.87□□□□□ -2.11
UBXN4-208ENST00000490163 C14orf178Q8N769 122 aaPredicted RBP1.87□□□□□ -2.11
UBXN4-208ENST00000490163 FXYD5Q96DB9 178 aa1.87□□□□□ -2.11
UBXN4-208ENST00000490163 SCGB3A1Q96QR1 104 aa1.87□□□□□ -2.11
UBXN4-208ENST00000490163 FREM1Q5H8C1 2179 aa1.87□□□□□ -2.11
UBXN4-208ENST00000490163 TRAV12-1A0A0B4J245 112 aa1.87□□□□□ -2.11
UBXN4-208ENST00000490163 LY6LH3BQJ8 138 aa1.87□□□□□ -2.11
UBXN4-208ENST00000490163 COL8A2P25067 703 aa1.87□□□□□ -2.11
UBXN4-208ENST00000490163 LINC00305Q7Z4B0 112 aa1.87□□□□□ -2.11
UBXN4-208ENST00000490163 Q8IYB0 196 aa1.87□□□□□ -2.11
UBXN4-208ENST00000490163 RNF182Q8N6D2 247 aa1.87□□□□□ -2.11
UBXN4-208ENST00000490163 LINC01600Q96MT4 127 aa1.87□□□□□ -2.11
UBXN4-208ENST00000490163 TNCP24821 2201 aa1.87□□□□□ -2.11
UBXN4-208ENST00000490163 SDK2Q58EX2 2172 aa1.86□□□□□ -2.11
UBXN4-208ENST00000490163 TRAV8-3A0A0A6YYJ7 113 aa1.86□□□□□ -2.11
UBXN4-208ENST00000490163 A0A0J9YXY3 114 aa1.86□□□□□ -2.11
UBXN4-208ENST00000490163 A0A0J9YY99 117 aa1.86□□□□□ -2.11
UBXN4-208ENST00000490163 INAFM2P0DMQ5 153 aa1.86□□□□□ -2.11
UBXN4-208ENST00000490163 ERHP84090 104 aaKnown RBP1.86□□□□□ -2.11
UBXN4-208ENST00000490163 RBMY1FQ15415 496 aaKnown RBP1.86□□□□□ -2.11
UBXN4-208ENST00000490163 C20orf203Q8NBC4 194 aa1.86□□□□□ -2.11
UBXN4-208ENST00000490163 SND1-IT1Q9HBX3 110 aa1.86□□□□□ -2.11
UBXN4-208ENST00000490163 TRAV3A0A0B4J244 114 aa1.86□□□□□ -2.11
UBXN4-208ENST00000490163 TRBV30A0A0K0K1B3 111 aa1.86□□□□□ -2.11
UBXN4-208ENST00000490163 PCNX2A6NKB5 2137 aa1.86□□□□□ -2.11
UBXN4-208ENST00000490163 IQCF6A8MYZ5 107 aa1.86□□□□□ -2.11
UBXN4-208ENST00000490163 DNAL4O96015 105 aa1.86□□□□□ -2.11
UBXN4-208ENST00000490163 LHBP01229 141 aa1.86□□□□□ -2.11
UBXN4-208ENST00000490163 RNASE2P10153 161 aaKnown RBP1.86□□□□□ -2.11
UBXN4-208ENST00000490163 RBM3P98179 157 aaKnown RBP1.86□□□□□ -2.11
UBXN4-208ENST00000490163 RHOHQ15669 191 aa1.86□□□□□ -2.11
UBXN4-208ENST00000490163 ORMDL2Q53FV1 153 aa1.86□□□□□ -2.11
UBXN4-208ENST00000490163 DEFB121Q5J5C9 76 aa1.86□□□□□ -2.11
UBXN4-208ENST00000490163 FAM201AQ5SY85 155 aa1.86□□□□□ -2.11
UBXN4-208ENST00000490163 C5orf38Q86SI9 138 aa1.86□□□□□ -2.11
UBXN4-208ENST00000490163 CCL4L1Q8NHW4 92 aa1.86□□□□□ -2.11
UBXN4-208ENST00000490163 CAMK2N2Q96S95 79 aa1.86□□□□□ -2.11
UBXN4-208ENST00000490163 TM2D3Q9BRN9 247 aa1.86□□□□□ -2.11
UBXN4-208ENST00000490163 XIRP2A4UGR9 3374 aa1.86□□□□□ -2.11
UBXN4-208ENST00000490163 SVILO95425 2214 aa1.86□□□□□ -2.11
UBXN4-208ENST00000490163 BSNQ9UPA5 3926 aa1.86□□□□□ -2.11
UBXN4-208ENST00000490163 IGHV3-49A0A0A0MS15 119 aa1.85□□□□□ -2.11
UBXN4-208ENST00000490163 TRBV7-1A0A0A6YYK4 115 aa1.85□□□□□ -2.11
UBXN4-208ENST00000490163 TRGV5A0A0B4J1U4 118 aa1.85□□□□□ -2.11
UBXN4-208ENST00000490163 DEFB108AA8MXU0 73 aa1.85□□□□□ -2.11
UBXN4-208ENST00000490163 IGHV3-30P01768 117 aa1.85□□□□□ -2.11
UBXN4-208ENST00000490163 IGHV3-30-5P0DP03 117 aa1.85□□□□□ -2.11
UBXN4-208ENST00000490163 MRPS36P82909 103 aaKnown RBP1.85□□□□□ -2.11
UBXN4-208ENST00000490163 GUSBP11Q6P575 273 aa1.85□□□□□ -2.11
UBXN4-208ENST00000490163 ZFAND2AQ8N6M9 145 aa1.85□□□□□ -2.11
UBXN4-208ENST00000490163 CD177Q8N6Q3 437 aa1.85□□□□□ -2.11
UBXN4-208ENST00000490163 PROK2Q9HC23 129 aa1.85□□□□□ -2.11
UBXN4-208ENST00000490163 LAMTOR3Q9UHA4 124 aa1.85□□□□□ -2.11
UBXN4-208ENST00000490163 ICOSQ9Y6W8 199 aa1.85□□□□□ -2.11
UBXN4-208ENST00000490163 PLXNB1O43157 2135 aa1.85□□□□□ -2.11
UBXN4-208ENST00000490163 ABCA1O95477 2261 aa1.85□□□□□ -2.11
UBXN4-208ENST00000490163 IGKV1OR2-108A0A075B7D4 117 aa1.85□□□□□ -2.11
UBXN4-208ENST00000490163 IGLV3-32A0A0A0MS00 114 aa1.85□□□□□ -2.11
UBXN4-208ENST00000490163 TRBV6-1A0A0K0K1D8 114 aa1.85□□□□□ -2.11
UBXN4-208ENST00000490163 IGKV3-11P04433 115 aa1.85□□□□□ -2.11
UBXN4-208ENST00000490163 CGB3P0DN86 165 aa1.85□□□□□ -2.11
UBXN4-208ENST00000490163 CGB7P0DN87 165 aa1.85□□□□□ -2.11
UBXN4-208ENST00000490163 PRCDQ00LT1 54 aa1.85□□□□□ -2.11
UBXN4-208ENST00000490163 HIGD2BQ4VC39 106 aa1.85□□□□□ -2.11
UBXN4-208ENST00000490163 SDIM1Q6ZPB5 146 aa1.85□□□□□ -2.11
UBXN4-208ENST00000490163 FAM19A3Q7Z5A8 133 aa1.85□□□□□ -2.11
UBXN4-208ENST00000490163 C20orf197Q8N268 126 aa1.85□□□□□ -2.11
UBXN4-208ENST00000490163 DAND5Q8N907 189 aa1.85□□□□□ -2.11
UBXN4-208ENST00000490163 TRIOBPQ9H2D6 2365 aa1.85□□□□□ -2.11
UBXN4-208ENST00000490163 IGHV3-15A0A0B4J1V0 119 aa1.85□□□□□ -2.11
UBXN4-208ENST00000490163 TRAV12-3A0A0B4J271 114 aa1.85□□□□□ -2.11
UBXN4-208ENST00000490163 IGKV3D-7A0A0C4DH55 119 aa1.85□□□□□ -2.11
UBXN4-208ENST00000490163 SH2D1AO60880 128 aa1.85□□□□□ -2.11
UBXN4-208ENST00000490163 EIF4EBP1Q13541 118 aaPredicted RBP1.85□□□□□ -2.11
UBXN4-208ENST00000490163 CIRBPQ14011 172 aaKnown RBP1.85□□□□□ -2.11
UBXN4-208ENST00000490163 TMEM75Q8N9X5 138 aa1.85□□□□□ -2.11
UBXN4-208ENST00000490163 TMEM263Q8WUH6 116 aaKnown RBP1.85□□□□□ -2.11
UBXN4-208ENST00000490163 CYSTM1Q9H1C7 97 aa1.85□□□□□ -2.11
UBXN4-208ENST00000490163 TMEM14BQ9NUH8 114 aa1.85□□□□□ -2.11
UBXN4-208ENST00000490163 IGHV1-45A0A0A0MS14 117 aa1.84□□□□□ -2.11
UBXN4-208ENST00000490163 TRAV26-2A0A0B4J265 109 aa1.84□□□□□ -2.11
UBXN4-208ENST00000490163 LINC01546A6NGU7 62 aa1.84□□□□□ -2.11
UBXN4-208ENST00000490163 LST1O00453 97 aa1.84□□□□□ -2.11
UBXN4-208ENST00000490163 TIMM17BO60830 172 aa1.84□□□□□ -2.11
UBXN4-208ENST00000490163 HIST1H4AP62805 103 aaKnown RBP1.84□□□□□ -2.11
UBXN4-208ENST00000490163 Q6JHZ5 121 aa1.84□□□□□ -2.11
UBXN4-208ENST00000490163 DYNAPQ8N1N2 210 aa1.84□□□□□ -2.11
UBXN4-208ENST00000490163 CLEC2BQ92478 149 aa1.84□□□□□ -2.11
UBXN4-208ENST00000490163 SLC50A1Q9BRV3 221 aa1.84□□□□□ -2.11
UBXN4-208ENST00000490163 TRBV19A0A075B6N1 114 aa1.84□□□□□ -2.11
UBXN4-208ENST00000490163 ATP5EP56381 51 aaPredicted RBP1.84□□□□□ -2.11
UBXN4-208ENST00000490163 RPL39P5Q59GN2 51 aa1.84□□□□□ -2.11
UBXN4-208ENST00000490163 PATE2Q6UY27 113 aa1.84□□□□□ -2.11
UBXN4-208ENST00000490163 Q6ZTC4 211 aa1.84□□□□□ -2.11
UBXN4-208ENST00000490163 DAZ4Q86SG3 579 aaKnown RBP1.84□□□□□ -2.11
UBXN4-208ENST00000490163 MUSTN1Q8IVN3 82 aa1.84□□□□□ -2.11
Retrieved 100 of 20,778 RNA–protein pairs in 70 ms