RNA–Protein interactions for RNA: ENST00000489712.6

NF1-213, Transcript of neurofibromin 1, humanhuman

TSL 4

Gene NF1, Length 543 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NF1-213ENST00000489712 ROS1P08922 2347 aa0.7□□□□□ -2.3
NF1-213ENST00000489712 KIAA0100Q14667 2235 aaKnown RBP0.69□□□□□ -2.3
NF1-213ENST00000489712 PXDNQ92626 1479 aa0.69□□□□□ -2.3
NF1-213ENST00000489712 TRBV7-3A0A075B6L6 115 aa0.69□□□□□ -2.3
NF1-213ENST00000489712 A0A087WTM6 91 aa0.69□□□□□ -2.3
NF1-213ENST00000489712 TRGV1A0A0A0MS02 117 aa0.69□□□□□ -2.3
NF1-213ENST00000489712 TRAV1-2A0A0B4J238 106 aa0.69□□□□□ -2.3
NF1-213ENST00000489712 CLPSL1A2RUU4 121 aa0.69□□□□□ -2.3
NF1-213ENST00000489712 NAP1L6A6NFF2 107 aa0.69□□□□□ -2.3
NF1-213ENST00000489712 TMEM14DPA8MWL7 114 aa0.69□□□□□ -2.3
NF1-213ENST00000489712 TMEM262E9PQX1 116 aa0.69□□□□□ -2.3
NF1-213ENST00000489712 S100A8P05109 93 aa0.69□□□□□ -2.3
NF1-213ENST00000489712 GCHFRP30047 84 aa0.69□□□□□ -2.3
NF1-213ENST00000489712 SNCAP37840 140 aa0.69□□□□□ -2.3
NF1-213ENST00000489712 VMO1Q7Z5L0 202 aa0.69□□□□□ -2.3
NF1-213ENST00000489712 SMIM4Q8WVI0 70 aa0.69□□□□□ -2.3
NF1-213ENST00000489712 WFDC6Q9BQY6 131 aa0.69□□□□□ -2.3
NF1-213ENST00000489712 V9GYH0 126 aa0.69□□□□□ -2.3
NF1-213ENST00000489712 C10orf71Q711Q0 1435 aa0.69□□□□□ -2.3
NF1-213ENST00000489712 TCHHQ07283 1943 aa0.69□□□□□ -2.3
NF1-213ENST00000489712 CDK13Q14004 1512 aaKnown RBP0.69□□□□□ -2.3
NF1-213ENST00000489712 HELZ2Q9BYK8 2649 aaKnown RBP0.68□□□□□ -2.3
NF1-213ENST00000489712 LOC285556D6RIA3 1793 aa0.68□□□□□ -2.3
NF1-213ENST00000489712 CTXND1A0A1B0GTU2 59 aa0.68□□□□□ -2.3
NF1-213ENST00000489712 APOC3P02656 99 aa0.68□□□□□ -2.3
NF1-213ENST00000489712 S100A10P60903 97 aa0.68□□□□□ -2.3
NF1-213ENST00000489712 Q96NJ1 140 aa0.68□□□□□ -2.3
NF1-213ENST00000489712 SCAPERQ9BY12 1400 aa0.68□□□□□ -2.3
NF1-213ENST00000489712 ABCA4P78363 2273 aa0.68□□□□□ -2.3
NF1-213ENST00000489712 MAP2P11137 1827 aaKnown RBP0.68□□□□□ -2.3
NF1-213ENST00000489712 MRC2Q9UBG0 1479 aa0.67□□□□□ -2.3
NF1-213ENST00000489712 DOCK1Q14185 1865 aa0.67□□□□□ -2.3
NF1-213ENST00000489712 CNTLNQ9NXG0 1405 aa0.67□□□□□ -2.3
NF1-213ENST00000489712 GVQW2A0A096LPI5 108 aaPredicted RBP0.67□□□□□ -2.3
NF1-213ENST00000489712 M0R143 59 aa0.67□□□□□ -2.3
NF1-213ENST00000489712 LINC00032P0C843 101 aa0.67□□□□□ -2.3
NF1-213ENST00000489712 CCL18P55774 89 aa0.67□□□□□ -2.3
NF1-213ENST00000489712 TMEM170BQ5T4T1 132 aa0.67□□□□□ -2.3
NF1-213ENST00000489712 Q5VV11 94 aa0.67□□□□□ -2.3
NF1-213ENST00000489712 Q6ZRX8 168 aa0.67□□□□□ -2.3
NF1-213ENST00000489712 TSLPQ969D9 159 aa0.67□□□□□ -2.3
NF1-213ENST00000489712 NPVFQ9HCQ7 196 aa0.67□□□□□ -2.3
NF1-213ENST00000489712 MANBALQ9NQG1 85 aa0.67□□□□□ -2.3
NF1-213ENST00000489712 ROBO1Q9Y6N7 1651 aa0.67□□□□□ -2.3
NF1-213ENST00000489712 ARHGAP5Q13017 1502 aa0.67□□□□□ -2.3
NF1-213ENST00000489712 SIPA1L3O60292 1781 aaPredicted RBP0.66□□□□□ -2.3
NF1-213ENST00000489712 ZFYVE16Q7Z3T8 1539 aa0.66□□□□□ -2.3
NF1-213ENST00000489712 CRYM-AS1A6NIL9 109 aa0.66□□□□□ -2.3
NF1-213ENST00000489712 CHKB-CPT1BH3BT56 60 aa0.66□□□□□ -2.3
NF1-213ENST00000489712 M0R135 149 aa0.66□□□□□ -2.3
NF1-213ENST00000489712 PIN1P1O15428 100 aa0.66□□□□□ -2.3
NF1-213ENST00000489712 COX6CP09669 75 aa0.66□□□□□ -2.3
NF1-213ENST00000489712 COX17Q14061 63 aa0.66□□□□□ -2.3
NF1-213ENST00000489712 CFAP126Q5VTH2 177 aa0.66□□□□□ -2.3
NF1-213ENST00000489712 NDUFA4L2Q9NRX3 87 aa0.66□□□□□ -2.3
NF1-213ENST00000489712 TANC1Q9C0D5 1861 aa0.66□□□□□ -2.3
NF1-213ENST00000489712 PRDM2Q13029 1718 aa0.66□□□□□ -2.3
NF1-213ENST00000489712 MRC1P22897 1456 aa0.66□□□□□ -2.3
NF1-213ENST00000489712 MUC5BQ9HC84 5762 aaPredicted RBP0.66□□□□□ -2.3
NF1-213ENST00000489712 SPHKAPQ2M3C7 1700 aa0.65□□□□□ -2.31
NF1-213ENST00000489712 F8VRH5 84 aa0.65□□□□□ -2.31
NF1-213ENST00000489712 HMGN4O00479 90 aa0.65□□□□□ -2.31
NF1-213ENST00000489712 UQCR11O14957 56 aa0.65□□□□□ -2.31
NF1-213ENST00000489712 TRAPPC2P0DI81 140 aa0.65□□□□□ -2.31
NF1-213ENST00000489712 TRAPPC2BP0DI82 140 aa0.65□□□□□ -2.31
NF1-213ENST00000489712 S100A3P33764 101 aa0.65□□□□□ -2.31
NF1-213ENST00000489712 BAGE2Q86Y30 109 aa0.65□□□□□ -2.31
NF1-213ENST00000489712 FAM167A-AS1Q96KT0 104 aa0.65□□□□□ -2.31
NF1-213ENST00000489712 AMELXQ99217 191 aa0.65□□□□□ -2.31
NF1-213ENST00000489712 C10orf95Q9H7T3 257 aa0.65□□□□□ -2.31
NF1-213ENST00000489712 PROK2Q9HC23 129 aa0.65□□□□□ -2.31
NF1-213ENST00000489712 FAIMQ9NVQ4 179 aa0.65□□□□□ -2.31
NF1-213ENST00000489712 LINC00474Q9P2X8 69 aa0.65□□□□□ -2.31
NF1-213ENST00000489712 PRO1854Q9UHT4 67 aa0.65□□□□□ -2.31
NF1-213ENST00000489712 VPS8Q8N3P4 1428 aa0.64□□□□□ -2.31
NF1-213ENST00000489712 PI4KAP42356 2102 aa0.64□□□□□ -2.31
NF1-213ENST00000489712 A0A0D9SG42 100 aa0.64□□□□□ -2.31
NF1-213ENST00000489712 GNGT2O14610 69 aa0.64□□□□□ -2.31
NF1-213ENST00000489712 SPINK7P58062 85 aa0.64□□□□□ -2.31
NF1-213ENST00000489712 PKIAP61925 76 aa0.64□□□□□ -2.31
NF1-213ENST00000489712 Q0VG73 95 aa0.64□□□□□ -2.31
NF1-213ENST00000489712 COL5A1-AS1Q5SY13 56 aa0.64□□□□□ -2.31
NF1-213ENST00000489712 NCMAPQ5T1S8 102 aa0.64□□□□□ -2.31
NF1-213ENST00000489712 UBE2DNLQ8IWF7 75 aa0.64□□□□□ -2.31
NF1-213ENST00000489712 DPY30Q9C005 99 aa0.64□□□□□ -2.31
NF1-213ENST00000489712 CCNB3Q8WWL7 1395 aa0.64□□□□□ -2.31
NF1-213ENST00000489712 LAMC3Q9Y6N6 1575 aa0.64□□□□□ -2.31
NF1-213ENST00000489712 PSME4Q14997 1843 aa0.64□□□□□ -2.31
NF1-213ENST00000489712 IFT172Q9UG01 1749 aa0.64□□□□□ -2.31
NF1-213ENST00000489712 ZDBF2Q9HCK1 2354 aa0.63□□□□□ -2.31
NF1-213ENST00000489712 IGLC7A0M8Q6 106 aa0.63□□□□□ -2.31
NF1-213ENST00000489712 NDUFC1O43677 76 aa0.63□□□□□ -2.31
NF1-213ENST00000489712 SFT2D2O95562 160 aa0.63□□□□□ -2.31
NF1-213ENST00000489712 SEC11AP67812 179 aa0.63□□□□□ -2.31
NF1-213ENST00000489712 FAM213BQ8TBF2 198 aa0.63□□□□□ -2.31
NF1-213ENST00000489712 CC2D2AQ9P2K1 1620 aa0.63□□□□□ -2.31
NF1-213ENST00000489712 ZNF609O15014 1411 aa0.63□□□□□ -2.31
NF1-213ENST00000489712 MED13LQ71F56 2210 aa0.62□□□□□ -2.31
NF1-213ENST00000489712 GOLGA3Q08378 1498 aa0.62□□□□□ -2.31
NF1-213ENST00000489712 FYCO1Q9BQS8 1478 aa0.62□□□□□ -2.31
Retrieved 100 of 20,778 RNA–protein pairs in 93.6 ms