RNA–Protein interactions for RNA: ENST00000484581.6

VPS13A-211, Transcript of vacuolar protein sorting 13 homolog A, humanhuman

TSL 2 BASIC

Gene VPS13A, Length 1,155 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13A-211ENST00000484581 PPP1R17O96001 155 aa1.06□□□□□ -2.24
VPS13A-211ENST00000484581 Q5VV11 94 aa1.06□□□□□ -2.24
VPS13A-211ENST00000484581 BAGE3Q86Y29 109 aa1.06□□□□□ -2.24
VPS13A-211ENST00000484581 C10orf95Q9H7T3 257 aa1.06□□□□□ -2.24
VPS13A-211ENST00000484581 LENEPQ9Y5L5 61 aa1.06□□□□□ -2.24
VPS13A-211ENST00000484581 NAV3Q8IVL0 2385 aa1.06□□□□□ -2.24
VPS13A-211ENST00000484581 TMEM14DPA8MWL7 114 aa1.05□□□□□ -2.24
VPS13A-211ENST00000484581 CCL18P55774 89 aa1.05□□□□□ -2.24
VPS13A-211ENST00000484581 ATP5EP56381 51 aaPredicted RBP1.05□□□□□ -2.24
VPS13A-211ENST00000484581 DCDP81605 110 aaKnown RBP1.05□□□□□ -2.24
VPS13A-211ENST00000484581 PRR15LQ9BU68 103 aa1.05□□□□□ -2.24
VPS13A-211ENST00000484581 R4GMQ9 66 aa1.05□□□□□ -2.24
VPS13A-211ENST00000484581 MYO7AQ13402 2215 aa1.05□□□□□ -2.24
VPS13A-211ENST00000484581 SMARCA2P51531 1590 aa1.04□□□□□ -2.24
VPS13A-211ENST00000484581 NRKQ7Z2Y5 1582 aa1.04□□□□□ -2.24
VPS13A-211ENST00000484581 PRDM2Q13029 1718 aa1.04□□□□□ -2.24
VPS13A-211ENST00000484581 TRBV7-3A0A075B6L6 115 aa1.04□□□□□ -2.24
VPS13A-211ENST00000484581 HSD52Q0P140 79 aa1.04□□□□□ -2.24
VPS13A-211ENST00000484581 Q6ZRX8 168 aa1.04□□□□□ -2.24
VPS13A-211ENST00000484581 MYOZ3Q8TDC0 251 aa1.04□□□□□ -2.24
VPS13A-211ENST00000484581 TCHHQ07283 1943 aa1.04□□□□□ -2.24
VPS13A-211ENST00000484581 PSME4Q14997 1843 aa1.03□□□□□ -2.24
VPS13A-211ENST00000484581 MGST2Q99735 147 aa1.03□□□□□ -2.24
VPS13A-211ENST00000484581 FAM103A1Q9BTL3 118 aaKnown RBP1.03□□□□□ -2.24
VPS13A-211ENST00000484581 LINC00474Q9P2X8 69 aa1.03□□□□□ -2.24
VPS13A-211ENST00000484581 SSC5DA1L4H1 1573 aa1.03□□□□□ -2.24
VPS13A-211ENST00000484581 CADP27708 2225 aa1.03□□□□□ -2.25
VPS13A-211ENST00000484581 TRAV1-2A0A0B4J238 106 aa1.02□□□□□ -2.25
VPS13A-211ENST00000484581 SPINK8P0C7L1 97 aa1.02□□□□□ -2.25
VPS13A-211ENST00000484581 RBP2P50120 134 aa1.02□□□□□ -2.25
VPS13A-211ENST00000484581 SPAG11BQ08648 103 aa1.02□□□□□ -2.25
VPS13A-211ENST00000484581 ZMYM4Q5VZL5 1548 aa1.02□□□□□ -2.25
VPS13A-211ENST00000484581 SPAG11AQ6PDA7 123 aa1.02□□□□□ -2.25
VPS13A-211ENST00000484581 C10orf71Q711Q0 1435 aa1.02□□□□□ -2.25
VPS13A-211ENST00000484581 TSLPQ969D9 159 aa1.02□□□□□ -2.25
VPS13A-211ENST00000484581 H3BQ15 152 aa1.01□□□□□ -2.25
VPS13A-211ENST00000484581 FBN2P35556 2912 aa1.01□□□□□ -2.25
VPS13A-211ENST00000484581 TMEM218A2RU14 115 aa1□□□□□ -2.25
VPS13A-211ENST00000484581 SPINK7P58062 85 aa1□□□□□ -2.25
VPS13A-211ENST00000484581 S100A10P60903 97 aa1□□□□□ -2.25
VPS13A-211ENST00000484581 PROK2Q9HC23 129 aa1□□□□□ -2.25
VPS13A-211ENST00000484581 DYNLRB1Q9NP97 96 aa1□□□□□ -2.25
VPS13A-211ENST00000484581 NDUFA4L2Q9NRX3 87 aa1□□□□□ -2.25
VPS13A-211ENST00000484581 JMJD1CQ15652 2540 aa0.99□□□□□ -2.25
VPS13A-211ENST00000484581 MRC1P22897 1456 aa0.99□□□□□ -2.25
VPS13A-211ENST00000484581 CCNB3Q8WWL7 1395 aa0.99□□□□□ -2.25
VPS13A-211ENST00000484581 IFT172Q9UG01 1749 aa0.99□□□□□ -2.25
VPS13A-211ENST00000484581 TMEM262E9PQX1 116 aa0.99□□□□□ -2.25
VPS13A-211ENST00000484581 M0R135 149 aa0.99□□□□□ -2.25
VPS13A-211ENST00000484581 S100A8P05109 93 aa0.99□□□□□ -2.25
VPS13A-211ENST00000484581 GCHFRP30047 84 aa0.99□□□□□ -2.25
VPS13A-211ENST00000484581 SPATA8Q6RVD6 105 aa0.99□□□□□ -2.25
VPS13A-211ENST00000484581 SHROOM2Q13796 1616 aa0.99□□□□□ -2.25
VPS13A-211ENST00000484581 GPR98Q8WXG9 6306 aa0.98□□□□□ -2.25
VPS13A-211ENST00000484581 TRAV30A0A087WSZ9 112 aa0.98□□□□□ -2.25
VPS13A-211ENST00000484581 NCMAPQ5T1S8 102 aa0.98□□□□□ -2.25
VPS13A-211ENST00000484581 ZFYVE16Q7Z3T8 1539 aa0.98□□□□□ -2.25
VPS13A-211ENST00000484581 GOLGA3Q08378 1498 aa0.98□□□□□ -2.25
VPS13A-211ENST00000484581 SCAPERQ9BY12 1400 aa0.98□□□□□ -2.25
VPS13A-211ENST00000484581 CNTLNQ9NXG0 1405 aa0.98□□□□□ -2.25
VPS13A-211ENST00000484581 LOC285095A0A1B0GVY8 99 aa0.97□□□□□ -2.25
VPS13A-211ENST00000484581 M0R143 59 aa0.97□□□□□ -2.25
VPS13A-211ENST00000484581 SNCAP37840 140 aa0.97□□□□□ -2.25
VPS13A-211ENST00000484581 GNG11P61952 73 aa0.97□□□□□ -2.25
VPS13A-211ENST00000484581 V9GYH0 126 aa0.97□□□□□ -2.25
VPS13A-211ENST00000484581 SPHKAPQ2M3C7 1700 aa0.97□□□□□ -2.25
VPS13A-211ENST00000484581 MRC2Q9UBG0 1479 aa0.97□□□□□ -2.25
VPS13A-211ENST00000484581 LAMC3Q9Y6N6 1575 aa0.96□□□□□ -2.26
VPS13A-211ENST00000484581 G3V318 75 aa0.96□□□□□ -2.26
VPS13A-211ENST00000484581 KRTAP19-3Q7Z4W3 81 aa0.96□□□□□ -2.26
VPS13A-211ENST00000484581 SMIM4Q8WVI0 70 aa0.96□□□□□ -2.26
VPS13A-211ENST00000484581 Q9H521 79 aa0.96□□□□□ -2.26
VPS13A-211ENST00000484581 CTXND1A0A1B0GTU2 59 aa0.95□□□□□ -2.26
VPS13A-211ENST00000484581 PIN1P1O15428 100 aa0.95□□□□□ -2.26
VPS13A-211ENST00000484581 PKIAP61925 76 aa0.95□□□□□ -2.26
VPS13A-211ENST00000484581 CFAP126Q5VTH2 177 aa0.95□□□□□ -2.26
VPS13A-211ENST00000484581 ACBD7Q8N6N7 88 aa0.95□□□□□ -2.26
VPS13A-211ENST00000484581 AMELXQ99217 191 aa0.95□□□□□ -2.26
VPS13A-211ENST00000484581 AP4S1Q9Y587 144 aa0.95□□□□□ -2.26
VPS13A-211ENST00000484581 NOTCH1P46531 2555 aa0.94□□□□□ -2.26
VPS13A-211ENST00000484581 HMGN4O00479 90 aa0.94□□□□□ -2.26
VPS13A-211ENST00000484581 GNG2P59768 71 aa0.94□□□□□ -2.26
VPS13A-211ENST00000484581 COL5A1-AS1Q5SY13 56 aa0.94□□□□□ -2.26
VPS13A-211ENST00000484581 FAM167A-AS1Q96KT0 104 aa0.94□□□□□ -2.26
VPS13A-211ENST00000484581 ARHGAP5Q13017 1502 aa0.94□□□□□ -2.26
VPS13A-211ENST00000484581 IGLC7A0M8Q6 106 aa0.93□□□□□ -2.26
VPS13A-211ENST00000484581 NAP1L6A6NFF2 107 aa0.93□□□□□ -2.26
VPS13A-211ENST00000484581 F8VRH5 84 aa0.93□□□□□ -2.26
VPS13A-211ENST00000484581 CHKB-CPT1BH3BT56 60 aa0.93□□□□□ -2.26
VPS13A-211ENST00000484581 NMBP08949 121 aa0.93□□□□□ -2.26
VPS13A-211ENST00000484581 UBA52P62987 128 aaKnown RBP0.93□□□□□ -2.26
VPS13A-211ENST00000484581 BAGE2Q86Y30 109 aa0.93□□□□□ -2.26
VPS13A-211ENST00000484581 PLAC8Q9NZF1 115 aa0.93□□□□□ -2.26
VPS13A-211ENST00000484581 UQCR10Q9UDW1 63 aa0.93□□□□□ -2.26
VPS13A-211ENST00000484581 ZNF236Q9UL36 1845 aa0.92□□□□□ -2.26
VPS13A-211ENST00000484581 CRYM-AS1A6NIL9 109 aa0.92□□□□□ -2.26
VPS13A-211ENST00000484581 GNGT2O14610 69 aa0.92□□□□□ -2.26
VPS13A-211ENST00000484581 UQCR11O14957 56 aa0.92□□□□□ -2.26
VPS13A-211ENST00000484581 MPC2O95563 127 aa0.92□□□□□ -2.26
VPS13A-211ENST00000484581 TMEM170BQ5T4T1 132 aa0.92□□□□□ -2.26
Retrieved 100 of 20,778 RNA–protein pairs in 49.6 ms