RNA–Protein interactions for RNA: ENST00000477264.1

CLSTN1-205, Transcript of calsyntenin 1, humanhuman

TSL 2

Gene CLSTN1, Length 2,169 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN1-205ENST00000477264 A0A0J9YXV3 536 aa11.3□□□□□ -0.6
CLSTN1-205ENST00000477264 M0QY20 66 aa11.3□□□□□ -0.6
CLSTN1-205ENST00000477264 MRPS36P82909 103 aaKnown RBP11.3□□□□□ -0.6
CLSTN1-205ENST00000477264 CHCHD5Q9BSY4 110 aa11.3□□□□□ -0.6
CLSTN1-205ENST00000477264 VPS13CQ709C8 3753 aa11.3□□□□□ -0.6
CLSTN1-205ENST00000477264 FBN2P35556 2912 aa11.3□□□□□ -0.6
CLSTN1-205ENST00000477264 I3L3M4 83 aa11.3□□□□□ -0.6
CLSTN1-205ENST00000477264 DEFB113Q30KQ7 82 aa11.3□□□□□ -0.6
CLSTN1-205ENST00000477264 TMEM61Q8N0U2 210 aa11.3□□□□□ -0.6
CLSTN1-205ENST00000477264 DNAJC30Q96LL9 226 aa11.3□□□□□ -0.6
CLSTN1-205ENST00000477264 MED13LQ71F56 2210 aa11.29□□□□□ -0.6
CLSTN1-205ENST00000477264 IGHV3-64A0A075B6Q5 118 aa11.29□□□□□ -0.6
CLSTN1-205ENST00000477264 IGHV1-58A0A0C4DH39 117 aa11.29□□□□□ -0.6
CLSTN1-205ENST00000477264 BRI3O95415 125 aa11.29□□□□□ -0.6
CLSTN1-205ENST00000477264 C19orf54Q5BKX5 351 aa11.29□□□□□ -0.6
CLSTN1-205ENST00000477264 JPT2Q9H910 190 aa11.29□□□□□ -0.6
CLSTN1-205ENST00000477264 LRRC75A-AS1Q8N1F1 130 aa11.28□□□□□ -0.6
CLSTN1-205ENST00000477264 NDUFA12Q9UI09 145 aa11.28□□□□□ -0.6
CLSTN1-205ENST00000477264 TRAV41A0A0B4J266 112 aa11.28□□□□□ -0.6
CLSTN1-205ENST00000477264 FAM236AA0A1B0GUQ0 79 aa11.28□□□□□ -0.6
CLSTN1-205ENST00000477264 FAM236BA0A1B0GV22 79 aa11.28□□□□□ -0.6
CLSTN1-205ENST00000477264 UQCRQO14949 82 aa11.28□□□□□ -0.6
CLSTN1-205ENST00000477264 LINC00643Q86TS7 51 aa11.28□□□□□ -0.6
CLSTN1-205ENST00000477264 C3orf22Q8N5N4 141 aa11.28□□□□□ -0.6
CLSTN1-205ENST00000477264 C5orf56Q8N8D9 126 aa11.28□□□□□ -0.6
CLSTN1-205ENST00000477264 PRSS2P07478 247 aa11.27□□□□□ -0.6
CLSTN1-205ENST00000477264 MSMBP08118 114 aa11.27□□□□□ -0.6
CLSTN1-205ENST00000477264 DUX3Q96PT4 197 aa11.27□□□□□ -0.6
CLSTN1-205ENST00000477264 OPRPNQ99935 248 aaPredicted RBP11.27□□□□□ -0.6
CLSTN1-205ENST00000477264 CSMD2Q7Z408 3487 aa11.27□□□□□ -0.6
CLSTN1-205ENST00000477264 HELZ2Q9BYK8 2649 aaKnown RBP11.27□□□□□ -0.6
CLSTN1-205ENST00000477264 PTPN13Q12923 2485 aa11.27□□□□□ -0.61
CLSTN1-205ENST00000477264 B4DSR2 109 aa11.27□□□□□ -0.61
CLSTN1-205ENST00000477264 CLEC2BQ92478 149 aa11.27□□□□□ -0.61
CLSTN1-205ENST00000477264 EDA2RQ9HAV5 297 aa11.27□□□□□ -0.61
CLSTN1-205ENST00000477264 ID1P41134 155 aa11.26□□□□□ -0.61
CLSTN1-205ENST00000477264 CXCL5P42830 114 aa11.26□□□□□ -0.61
CLSTN1-205ENST00000477264 PRRC2AP48634 2157 aaKnown RBP11.26□□□□□ -0.61
CLSTN1-205ENST00000477264 C9orf153Q5TBE3 101 aa11.26□□□□□ -0.61
CLSTN1-205ENST00000477264 IGHV3-16A0A0C4DH30 117 aa11.26□□□□□ -0.61
CLSTN1-205ENST00000477264 F6UB75 175 aa11.26□□□□□ -0.61
CLSTN1-205ENST00000477264 H3BUA1 57 aa11.26□□□□□ -0.61
CLSTN1-205ENST00000477264 CD28P10747 220 aa11.26□□□□□ -0.61
CLSTN1-205ENST00000477264 FAM74A4Q5TZK3 123 aa11.26□□□□□ -0.61
CLSTN1-205ENST00000477264 HIST2H2BCQ6DN03 193 aa11.26□□□□□ -0.61
CLSTN1-205ENST00000477264 ABCA2Q9BZC7 2435 aa11.25□□□□□ -0.61
CLSTN1-205ENST00000477264 NDUFA7O95182 113 aa11.25□□□□□ -0.61
CLSTN1-205ENST00000477264 UNQ9165/PRO28630Q6UXU0 137 aa11.25□□□□□ -0.61
CLSTN1-205ENST00000477264 MOB4Q9Y3A3 225 aa11.25□□□□□ -0.61
CLSTN1-205ENST00000477264 POLQO75417 2590 aa11.25□□□□□ -0.61
CLSTN1-205ENST00000477264 ABCA12Q86UK0 2595 aa11.24□□□□□ -0.61
CLSTN1-205ENST00000477264 TINCRA0A1B0GVN0 87 aa11.24□□□□□ -0.61
CLSTN1-205ENST00000477264 VSIG2Q96IQ7 327 aa11.24□□□□□ -0.61
CLSTN1-205ENST00000477264 USMG5Q96IX5 58 aa11.24□□□□□ -0.61
CLSTN1-205ENST00000477264 SPXQ9BT56 116 aa11.24□□□□□ -0.61
CLSTN1-205ENST00000477264 MAP1AP78559 2803 aaPredicted RBP11.24□□□□□ -0.61
CLSTN1-205ENST00000477264 SAA4P35542 130 aa11.24□□□□□ -0.61
CLSTN1-205ENST00000477264 DEFB1P60022 68 aa11.24□□□□□ -0.61
CLSTN1-205ENST00000477264 RPL11P62913 178 aaKnown RBP11.24□□□□□ -0.61
CLSTN1-205ENST00000477264 DEFB104AQ8WTQ1 72 aa11.24□□□□□ -0.61
CLSTN1-205ENST00000477264 LINC00526Q96FQ7 95 aa11.24□□□□□ -0.61
CLSTN1-205ENST00000477264 A0A1B0GX51 115 aa11.23□□□□□ -0.61
CLSTN1-205ENST00000477264 ADAMTSL4-AS1Q5T5F5 129 aa11.23□□□□□ -0.61
CLSTN1-205ENST00000477264 DCANP1Q8TF63 244 aa11.23□□□□□ -0.61
CLSTN1-205ENST00000477264 COPS9Q8WXC6 57 aa11.23□□□□□ -0.61
CLSTN1-205ENST00000477264 ZNF580Q9UK33 172 aa11.23□□□□□ -0.61
CLSTN1-205ENST00000477264 NPFFO15130 113 aa11.23□□□□□ -0.61
CLSTN1-205ENST00000477264 SDIM1Q6ZPB5 146 aa11.23□□□□□ -0.61
CLSTN1-205ENST00000477264 LINC01356Q8N9X3 169 aa11.23□□□□□ -0.61
CLSTN1-205ENST00000477264 TRAV8-3A0A0A6YYJ7 113 aa11.22□□□□□ -0.61
CLSTN1-205ENST00000477264 APCP25054 2843 aa11.22□□□□□ -0.61
CLSTN1-205ENST00000477264 COX7A2LO14548 114 aa11.21□□□□□ -0.61
CLSTN1-205ENST00000477264 PPDPFQ9H3Y8 114 aa11.21□□□□□ -0.61
CLSTN1-205ENST00000477264 NAV2Q8IVL1 2488 aa11.21□□□□□ -0.61
CLSTN1-205ENST00000477264 ADARB2-AS1A8MUL3 147 aa11.21□□□□□ -0.62
CLSTN1-205ENST00000477264 J3KT08 172 aa11.21□□□□□ -0.62
CLSTN1-205ENST00000477264 RHPN1-AS1Q9BWJ2 59 aa11.21□□□□□ -0.62
CLSTN1-205ENST00000477264 PEMTQ9UBM1 199 aa11.21□□□□□ -0.62
CLSTN1-205ENST00000477264 A0A096LNT2 108 aa11.2□□□□□ -0.62
CLSTN1-205ENST00000477264 TRAV12-3A0A0B4J271 114 aa11.2□□□□□ -0.62
CLSTN1-205ENST00000477264 Q96MF0 132 aa11.2□□□□□ -0.62
CLSTN1-205ENST00000477264 NBPF19A0A087WUL8 3843 aa11.2□□□□□ -0.62
CLSTN1-205ENST00000477264 TRACP01848 142 aa11.2□□□□□ -0.62
CLSTN1-205ENST00000477264 DAND5Q8N907 189 aa11.2□□□□□ -0.62
CLSTN1-205ENST00000477264 MAPK1IP1LQ8NDC0 245 aa11.2□□□□□ -0.62
CLSTN1-205ENST00000477264 DAZ1Q9NQZ3 744 aaKnown RBP11.2□□□□□ -0.62
CLSTN1-205ENST00000477264 GCN1Q92616 2671 aaKnown RBP11.2□□□□□ -0.62
CLSTN1-205ENST00000477264 IGHV3OR16-10A0A075B7F0 116 aa11.19□□□□□ -0.62
CLSTN1-205ENST00000477264 NDUFA1O15239 70 aa11.19□□□□□ -0.62
CLSTN1-205ENST00000477264 CIRBPQ14011 172 aaKnown RBP11.19□□□□□ -0.62
CLSTN1-205ENST00000477264 FAM222AQ5U5X8 452 aa11.19□□□□□ -0.62
CLSTN1-205ENST00000477264 TRBV12-3P01733 135 aa11.18□□□□□ -0.62
CLSTN1-205ENST00000477264 C5orf38Q86SI9 138 aa11.18□□□□□ -0.62
CLSTN1-205ENST00000477264 SVEP1Q4LDE5 3571 aa11.18□□□□□ -0.62
CLSTN1-205ENST00000477264 IGHV1OR15-1A0A075B7D0 117 aa11.18□□□□□ -0.62
CLSTN1-205ENST00000477264 K7EMT4 169 aa11.18□□□□□ -0.62
CLSTN1-205ENST00000477264 INAFM2P0DMQ5 153 aa11.18□□□□□ -0.62
CLSTN1-205ENST00000477264 C5orf47Q569G3 176 aa11.18□□□□□ -0.62
CLSTN1-205ENST00000477264 BRD3OSQ6XYD6 125 aa11.18□□□□□ -0.62
CLSTN1-205ENST00000477264 CSDC2Q9Y534 153 aaKnown RBP11.18□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 100.6 ms