RNA–Protein interactions for RNA: ENST00000474871.5

NPHP3-206, Transcript of nephrocystin 3, humanhuman

TSL 2

Gene NPHP3, Length 4,493 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP3-206ENST00000474871 H7C423 109 aa3.55□□□□□ -1.84
NPHP3-206ENST00000474871 KIAA0087Q14695 138 aa3.55□□□□□ -1.84
NPHP3-206ENST00000474871 BRD3OSQ6XYD6 125 aa3.55□□□□□ -1.84
NPHP3-206ENST00000474871 LINC00643Q86TS7 51 aa3.55□□□□□ -1.84
NPHP3-206ENST00000474871 TOMM7Q9P0U1 55 aa3.55□□□□□ -1.84
NPHP3-206ENST00000474871 FRYQ5TBA9 3013 aa3.55□□□□□ -1.84
NPHP3-206ENST00000474871 ARFGEF3Q5TH69 2177 aa3.55□□□□□ -1.84
NPHP3-206ENST00000474871 CFAP47Q6ZTR5 3102 aa3.55□□□□□ -1.84
NPHP3-206ENST00000474871 A0A1B0GUT8 65 aa3.54□□□□□ -1.84
NPHP3-206ENST00000474871 RBMY1FQ15415 496 aaKnown RBP3.54□□□□□ -1.84
NPHP3-206ENST00000474871 ZNF818PQ6ZRF7 136 aa3.54□□□□□ -1.84
NPHP3-206ENST00000474871 DOCK10Q96BY6 2186 aa3.54□□□□□ -1.84
NPHP3-206ENST00000474871 IGKV1-27A0A075B6S5 117 aa3.54□□□□□ -1.84
NPHP3-206ENST00000474871 TRBV27A0A0K0K1C4 114 aa3.54□□□□□ -1.84
NPHP3-206ENST00000474871 F8WEM9 126 aa3.54□□□□□ -1.84
NPHP3-206ENST00000474871 H0Y9J4 135 aa3.54□□□□□ -1.84
NPHP3-206ENST00000474871 H3BUA1 57 aa3.54□□□□□ -1.84
NPHP3-206ENST00000474871 HBBP68871 147 aa3.54□□□□□ -1.84
NPHP3-206ENST00000474871 DAZAP2Q15038 168 aaPredicted RBP3.54□□□□□ -1.84
NPHP3-206ENST00000474871 PATE2Q6UY27 113 aa3.54□□□□□ -1.84
NPHP3-206ENST00000474871 KRTAP17-1Q9BYP8 105 aa3.54□□□□□ -1.84
NPHP3-206ENST00000474871 BUB1B-PAK6H3BSN5 160 aa3.54□□□□□ -1.84
NPHP3-206ENST00000474871 PEX7O00628 323 aa3.54□□□□□ -1.84
NPHP3-206ENST00000474871 XCL1P47992 114 aa3.54□□□□□ -1.84
NPHP3-206ENST00000474871 DIRC1Q969H9 104 aa3.54□□□□□ -1.84
NPHP3-206ENST00000474871 NPCDR1Q9BY65 106 aa3.54□□□□□ -1.84
NPHP3-206ENST00000474871 XCL2Q9UBD3 114 aa3.54□□□□□ -1.84
NPHP3-206ENST00000474871 DKK2Q9UBU2 259 aa3.54□□□□□ -1.84
NPHP3-206ENST00000474871 SCO2A0A1W2PP80 73 aa3.53□□□□□ -1.84
NPHP3-206ENST00000474871 PMS2P5A8MQ11 134 aa3.53□□□□□ -1.84
NPHP3-206ENST00000474871 TMEM256-PLSCR3K7ERE1 68 aa3.53□□□□□ -1.84
NPHP3-206ENST00000474871 IGHV3-23P01764 117 aa3.53□□□□□ -1.84
NPHP3-206ENST00000474871 ARL14EPLP0DKL9 152 aa3.53□□□□□ -1.84
NPHP3-206ENST00000474871 BRWD1-AS2P59051 145 aa3.53□□□□□ -1.84
NPHP3-206ENST00000474871 TRGV1A0A0A0MS02 117 aa3.53□□□□□ -1.84
NPHP3-206ENST00000474871 C17orf98A8MV24 154 aa3.53□□□□□ -1.84
NPHP3-206ENST00000474871 ZNHIT1O43257 154 aa3.53□□□□□ -1.84
NPHP3-206ENST00000474871 CFC1BP0CG36 223 aa3.53□□□□□ -1.84
NPHP3-206ENST00000474871 CFC1P0CG37 223 aa3.53□□□□□ -1.84
NPHP3-206ENST00000474871 OSTCQ9NRP0 149 aa3.53□□□□□ -1.84
NPHP3-206ENST00000474871 MRPL35Q9NZE8 188 aaKnown RBP3.53□□□□□ -1.84
NPHP3-206ENST00000474871 LAMTOR3Q9UHA4 124 aa3.53□□□□□ -1.84
NPHP3-206ENST00000474871 IGHV3-66A0A0C4DH42 116 aa3.53□□□□□ -1.84
NPHP3-206ENST00000474871 LOC389332A0A1B0GUA5 103 aa3.53□□□□□ -1.84
NPHP3-206ENST00000474871 ZNF138P52744 262 aa3.53□□□□□ -1.84
NPHP3-206ENST00000474871 Q6ZTC4 211 aa3.53□□□□□ -1.84
NPHP3-206ENST00000474871 OPRPNQ99935 248 aaPredicted RBP3.53□□□□□ -1.84
NPHP3-206ENST00000474871 MED13LQ71F56 2210 aa3.53□□□□□ -1.84
NPHP3-206ENST00000474871 LOC400499M0QZD8 3231 aa3.53□□□□□ -1.85
NPHP3-206ENST00000474871 CSPG4Q6UVK1 2322 aa3.52□□□□□ -1.85
NPHP3-206ENST00000474871 TRBV10-2A0A0K0K1G8 114 aa3.52□□□□□ -1.85
NPHP3-206ENST00000474871 PLA2G2AP14555 144 aa3.52□□□□□ -1.85
NPHP3-206ENST00000474871 PIK3CD-AS1Q5SR53 167 aa3.52□□□□□ -1.85
NPHP3-206ENST00000474871 MORN5Q5VZ52 161 aa3.52□□□□□ -1.85
NPHP3-206ENST00000474871 LYPD1Q8N2G4 141 aa3.52□□□□□ -1.85
NPHP3-206ENST00000474871 SCGB3A1Q96QR1 104 aa3.52□□□□□ -1.85
NPHP3-206ENST00000474871 RHPN1-AS1Q9BWJ2 59 aa3.52□□□□□ -1.85
NPHP3-206ENST00000474871 ORMDL3Q8N138 153 aa3.52□□□□□ -1.85
NPHP3-206ENST00000474871 MPLKIPQ8TAP9 179 aa3.52□□□□□ -1.85
NPHP3-206ENST00000474871 ZNF706Q9Y5V0 76 aaPredicted RBP3.52□□□□□ -1.85
NPHP3-206ENST00000474871 CHD8Q9HCK8 2581 aa3.52□□□□□ -1.85
NPHP3-206ENST00000474871 LOC107984156A0A0G2JMH3 177 aa3.52□□□□□ -1.85
NPHP3-206ENST00000474871 C16orf90A8MZG2 172 aa3.52□□□□□ -1.85
NPHP3-206ENST00000474871 CGB7P0DN87 165 aa3.52□□□□□ -1.85
NPHP3-206ENST00000474871 LMO4P61968 165 aa3.52□□□□□ -1.85
NPHP3-206ENST00000474871 LCA10Q71F78 164 aa3.52□□□□□ -1.85
NPHP3-206ENST00000474871 ARL17AQ8IVW1 177 aa3.52□□□□□ -1.85
NPHP3-206ENST00000474871 IFI27L1Q96BM0 104 aa3.52□□□□□ -1.85
NPHP3-206ENST00000474871 FGF23Q9GZV9 251 aaPredicted RBP3.52□□□□□ -1.85
NPHP3-206ENST00000474871 ZNF292O60281 2723 aa3.52□□□□□ -1.85
NPHP3-206ENST00000474871 IGKV1-12A0A0C4DH73 117 aa3.52□□□□□ -1.85
NPHP3-206ENST00000474871 NDUFS5O43920 106 aa3.52□□□□□ -1.85
NPHP3-206ENST00000474871 IGKV1D-12P01611 117 aa3.52□□□□□ -1.85
NPHP3-206ENST00000474871 CGB3P0DN86 165 aa3.52□□□□□ -1.85
NPHP3-206ENST00000474871 H3BMM0 161 aa3.51□□□□□ -1.85
NPHP3-206ENST00000474871 RNASE1P07998 156 aaKnown RBP3.51□□□□□ -1.85
NPHP3-206ENST00000474871 SYNJ2BPP57105 145 aa3.51□□□□□ -1.85
NPHP3-206ENST00000474871 UBE2WQ96B02 151 aa3.51□□□□□ -1.85
NPHP3-206ENST00000474871 TRBV6-6A0A0A6YYG2 114 aa3.51□□□□□ -1.85
NPHP3-206ENST00000474871 IGHV3-48P01763 117 aa3.51□□□□□ -1.85
NPHP3-206ENST00000474871 TFF1P04155 84 aa3.51□□□□□ -1.85
NPHP3-206ENST00000474871 IGKV1-16P04430 117 aa3.51□□□□□ -1.85
NPHP3-206ENST00000474871 PLNP26678 52 aa3.51□□□□□ -1.85
NPHP3-206ENST00000474871 CCL18P55774 89 aa3.51□□□□□ -1.85
NPHP3-206ENST00000474871 GAFA1Q96PS6 74 aa3.51□□□□□ -1.85
NPHP3-206ENST00000474871 HIST1H4GQ99525 98 aa3.51□□□□□ -1.85
NPHP3-206ENST00000474871 RPP21Q9H633 154 aaKnown RBP3.51□□□□□ -1.85
NPHP3-206ENST00000474871 UBE2D4Q9Y2X8 147 aa3.51□□□□□ -1.85
NPHP3-206ENST00000474871 S4R3C0 116 aa3.51□□□□□ -1.85
NPHP3-206ENST00000474871 ANKHD1Q8IWZ3 2542 aaKnown RBP3.51□□□□□ -1.85
NPHP3-206ENST00000474871 RNASE2P10153 161 aaKnown RBP3.51□□□□□ -1.85
NPHP3-206ENST00000474871 DEFB131AP59861 70 aa3.51□□□□□ -1.85
NPHP3-206ENST00000474871 SYCNQ0VAF6 134 aa3.51□□□□□ -1.85
NPHP3-206ENST00000474871 PDE6HQ13956 83 aa3.51□□□□□ -1.85
NPHP3-206ENST00000474871 KLK15Q9H2R5 256 aa3.51□□□□□ -1.85
NPHP3-206ENST00000474871 KAAG1Q9UBP8 84 aa3.51□□□□□ -1.85
NPHP3-206ENST00000474871 U3KQK5 164 aa3.51□□□□□ -1.85
NPHP3-206ENST00000474871 TRAV16A0A0A6YYK6 109 aaPredicted RBP3.5□□□□□ -1.85
NPHP3-206ENST00000474871 SLC25A29Q8N8R3 303 aa3.5□□□□□ -1.85
NPHP3-206ENST00000474871 MUC4Q99102 2169 aa3.5□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 69.9 ms