RNA–Protein interactions for RNA: ENST00000466862.1

GTF3C3-209, Transcript of general transcription factor IIIC subunit 3, humanhuman

TSL 2

Gene GTF3C3, Length 447 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C3-209ENST00000466862 MAPKBP1O60336 1514 aa0.46□□□□□ -2.34
GTF3C3-209ENST00000466862 ZFYVE16Q7Z3T8 1539 aa0.46□□□□□ -2.34
GTF3C3-209ENST00000466862 MRC1P22897 1456 aa0.46□□□□□ -2.34
GTF3C3-209ENST00000466862 C10orf71Q711Q0 1435 aa0.46□□□□□ -2.34
GTF3C3-209ENST00000466862 ZDBF2Q9HCK1 2354 aa0.46□□□□□ -2.34
GTF3C3-209ENST00000466862 TANC1Q9C0D5 1861 aa0.46□□□□□ -2.34
GTF3C3-209ENST00000466862 SSC5DA1L4H1 1573 aa0.45□□□□□ -2.34
GTF3C3-209ENST00000466862 CDK13Q14004 1512 aaKnown RBP0.45□□□□□ -2.34
GTF3C3-209ENST00000466862 PRDM2Q13029 1718 aa0.45□□□□□ -2.34
GTF3C3-209ENST00000466862 SPHKAPQ2M3C7 1700 aa0.45□□□□□ -2.34
GTF3C3-209ENST00000466862 GVQW2A0A096LPI5 108 aaPredicted RBP0.45□□□□□ -2.34
GTF3C3-209ENST00000466862 SPINK8P0C7L1 97 aa0.45□□□□□ -2.34
GTF3C3-209ENST00000466862 SMIM6P0DI80 62 aa0.45□□□□□ -2.34
GTF3C3-209ENST00000466862 CCL18P55774 89 aa0.45□□□□□ -2.34
GTF3C3-209ENST00000466862 ATP5EP56381 51 aaPredicted RBP0.45□□□□□ -2.34
GTF3C3-209ENST00000466862 SMIM11BQ8TCY0 68 aa0.45□□□□□ -2.34
GTF3C3-209ENST00000466862 BPESC1Q9GZL8 116 aa0.45□□□□□ -2.34
GTF3C3-209ENST00000466862 LENEPQ9Y5L5 61 aa0.45□□□□□ -2.34
GTF3C3-209ENST00000466862 ABCA1O95477 2261 aa0.45□□□□□ -2.34
GTF3C3-209ENST00000466862 SCAPERQ9BY12 1400 aa0.45□□□□□ -2.34
GTF3C3-209ENST00000466862 KNTC1P50748 2209 aa0.45□□□□□ -2.34
GTF3C3-209ENST00000466862 IFT172Q9UG01 1749 aa0.44□□□□□ -2.34
GTF3C3-209ENST00000466862 ARHGAP5Q13017 1502 aa0.44□□□□□ -2.34
GTF3C3-209ENST00000466862 ZMYM4Q5VZL5 1548 aa0.44□□□□□ -2.34
GTF3C3-209ENST00000466862 MED13LQ71F56 2210 aa0.44□□□□□ -2.34
GTF3C3-209ENST00000466862 GOLGA3Q08378 1498 aa0.44□□□□□ -2.34
GTF3C3-209ENST00000466862 TRBV7-3A0A075B6L6 115 aa0.44□□□□□ -2.34
GTF3C3-209ENST00000466862 TMEM218A2RU14 115 aa0.44□□□□□ -2.34
GTF3C3-209ENST00000466862 TMEM14DPA8MWL7 114 aa0.44□□□□□ -2.34
GTF3C3-209ENST00000466862 SNCAP37840 140 aa0.44□□□□□ -2.34
GTF3C3-209ENST00000466862 SPAG11BQ08648 103 aa0.44□□□□□ -2.34
GTF3C3-209ENST00000466862 SPAG11AQ6PDA7 123 aa0.44□□□□□ -2.34
GTF3C3-209ENST00000466862 VMO1Q7Z5L0 202 aa0.44□□□□□ -2.34
GTF3C3-209ENST00000466862 BAGE3Q86Y29 109 aa0.44□□□□□ -2.34
GTF3C3-209ENST00000466862 FAM213BQ8TBF2 198 aa0.44□□□□□ -2.34
GTF3C3-209ENST00000466862 MYOZ3Q8TDC0 251 aa0.44□□□□□ -2.34
GTF3C3-209ENST00000466862 FAM103A1Q9BTL3 118 aaKnown RBP0.44□□□□□ -2.34
GTF3C3-209ENST00000466862 PRR15LQ9BU68 103 aa0.44□□□□□ -2.34
GTF3C3-209ENST00000466862 NDUFA4L2Q9NRX3 87 aa0.44□□□□□ -2.34
GTF3C3-209ENST00000466862 SCP2D1Q9UJQ7 156 aa0.44□□□□□ -2.34
GTF3C3-209ENST00000466862 R4GMQ9 66 aa0.44□□□□□ -2.34
GTF3C3-209ENST00000466862 V9GYH0 126 aa0.44□□□□□ -2.34
GTF3C3-209ENST00000466862 CNTLNQ9NXG0 1405 aa0.44□□□□□ -2.34
GTF3C3-209ENST00000466862 MYH8P13535 1937 aa0.44□□□□□ -2.34
GTF3C3-209ENST00000466862 ASH1LQ9NR48 2969 aaKnown RBP0.44□□□□□ -2.34
GTF3C3-209ENST00000466862 TET3O43151 1660 aa0.43□□□□□ -2.34
GTF3C3-209ENST00000466862 DOCK2Q92608 1830 aa0.43□□□□□ -2.34
GTF3C3-209ENST00000466862 ZNF469Q96JG9 3925 aaPredicted RBP0.43□□□□□ -2.34
GTF3C3-209ENST00000466862 TRAV30A0A087WSZ9 112 aa0.43□□□□□ -2.34
GTF3C3-209ENST00000466862 M0R135 149 aa0.43□□□□□ -2.34
GTF3C3-209ENST00000466862 SPINK7P58062 85 aa0.43□□□□□ -2.34
GTF3C3-209ENST00000466862 S100A10P60903 97 aa0.43□□□□□ -2.34
GTF3C3-209ENST00000466862 GNG11P61952 73 aa0.43□□□□□ -2.34
GTF3C3-209ENST00000466862 DCDP81605 110 aaKnown RBP0.43□□□□□ -2.34
GTF3C3-209ENST00000466862 SPATA8Q6RVD6 105 aa0.43□□□□□ -2.34
GTF3C3-209ENST00000466862 Q6ZRX8 168 aa0.43□□□□□ -2.34
GTF3C3-209ENST00000466862 MGST2Q99735 147 aa0.43□□□□□ -2.34
GTF3C3-209ENST00000466862 C10orf95Q9H7T3 257 aa0.43□□□□□ -2.34
GTF3C3-209ENST00000466862 DYNLRB1Q9NP97 96 aa0.43□□□□□ -2.34
GTF3C3-209ENST00000466862 F5P12259 2224 aa0.42□□□□□ -2.34
GTF3C3-209ENST00000466862 MRC2Q9UBG0 1479 aa0.42□□□□□ -2.34
GTF3C3-209ENST00000466862 SHANK2Q9UPX8 1470 aa0.42□□□□□ -2.34
GTF3C3-209ENST00000466862 CTXND1A0A1B0GTU2 59 aa0.42□□□□□ -2.34
GTF3C3-209ENST00000466862 TMEM262E9PQX1 116 aa0.42□□□□□ -2.34
GTF3C3-209ENST00000466862 G3V318 75 aa0.42□□□□□ -2.34
GTF3C3-209ENST00000466862 CHKB-CPT1BH3BT56 60 aa0.42□□□□□ -2.34
GTF3C3-209ENST00000466862 HMGN4O00479 90 aa0.42□□□□□ -2.34
GTF3C3-209ENST00000466862 GCHFRP30047 84 aa0.42□□□□□ -2.34
GTF3C3-209ENST00000466862 NCMAPQ5T1S8 102 aa0.42□□□□□ -2.34
GTF3C3-209ENST00000466862 CFAP126Q5VTH2 177 aa0.42□□□□□ -2.34
GTF3C3-209ENST00000466862 Q5VV11 94 aa0.42□□□□□ -2.34
GTF3C3-209ENST00000466862 TOPAZ1Q8N9V7 1692 aa0.42□□□□□ -2.34
GTF3C3-209ENST00000466862 ARHGEF5Q12774 1597 aa0.41□□□□□ -2.34
GTF3C3-209ENST00000466862 LAMC3Q9Y6N6 1575 aa0.41□□□□□ -2.34
GTF3C3-209ENST00000466862 PSME4Q14997 1843 aa0.41□□□□□ -2.34
GTF3C3-209ENST00000466862 ABCC5O15440 1437 aa0.41□□□□□ -2.34
GTF3C3-209ENST00000466862 KDM5AP29375 1690 aaKnown RBP0.41□□□□□ -2.34
GTF3C3-209ENST00000466862 MYOM1P52179 1685 aa0.41□□□□□ -2.34
GTF3C3-209ENST00000466862 Q0VG73 95 aa0.41□□□□□ -2.34
GTF3C3-209ENST00000466862 AMELXQ99217 191 aa0.41□□□□□ -2.34
GTF3C3-209ENST00000466862 MANBALQ9NQG1 85 aa0.41□□□□□ -2.34
GTF3C3-209ENST00000466862 TOP2BQ02880 1626 aa0.41□□□□□ -2.34
GTF3C3-209ENST00000466862 ABCA3Q99758 1704 aa0.41□□□□□ -2.34
GTF3C3-209ENST00000466862 ZNF236Q9UL36 1845 aa0.41□□□□□ -2.34
GTF3C3-209ENST00000466862 KIF21AQ7Z4S6 1674 aa0.4□□□□□ -2.34
GTF3C3-209ENST00000466862 VPS8Q8N3P4 1428 aa0.4□□□□□ -2.34
GTF3C3-209ENST00000466862 TRAV22A0A0B4J277 110 aa0.4□□□□□ -2.35
GTF3C3-209ENST00000466862 hADV29S1A0JD25 119 aa0.4□□□□□ -2.35
GTF3C3-209ENST00000466862 IGLC7A0M8Q6 106 aa0.4□□□□□ -2.35
GTF3C3-209ENST00000466862 NAP1L6A6NFF2 107 aa0.4□□□□□ -2.35
GTF3C3-209ENST00000466862 CRYM-AS1A6NIL9 109 aa0.4□□□□□ -2.35
GTF3C3-209ENST00000466862 F8VRH5 84 aa0.4□□□□□ -2.35
GTF3C3-209ENST00000466862 H3BQ15 152 aa0.4□□□□□ -2.35
GTF3C3-209ENST00000466862 MPC2O95563 127 aa0.4□□□□□ -2.35
GTF3C3-209ENST00000466862 NMBP08949 121 aa0.4□□□□□ -2.35
GTF3C3-209ENST00000466862 SFTA2Q6UW10 78 aa0.4□□□□□ -2.35
GTF3C3-209ENST00000466862 ACBD7Q8N6N7 88 aa0.4□□□□□ -2.35
GTF3C3-209ENST00000466862 FAM167A-AS1Q96KT0 104 aa0.4□□□□□ -2.35
GTF3C3-209ENST00000466862 PROK2Q9HC23 129 aa0.4□□□□□ -2.35
GTF3C3-209ENST00000466862 NPVFQ9HCQ7 196 aa0.4□□□□□ -2.35
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms