RNA–Protein interactions for RNA: ENST00000466696.1

CHMP2B-202, Transcript of charged multivesicular body protein 2B, humanhuman

TSL 2

Gene CHMP2B, Length 664 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP2B-202ENST00000466696 C10orf128Q5T292 105 aa-0.18□□□□□ -2.44
CHMP2B-202ENST00000466696 SPAG11AQ6PDA7 123 aa-0.18□□□□□ -2.44
CHMP2B-202ENST00000466696 MAFIPQ8WZ33 124 aa-0.18□□□□□ -2.44
CHMP2B-202ENST00000466696 COPZ2Q9P299 210 aa-0.18□□□□□ -2.44
CHMP2B-202ENST00000466696 LRRC37A3O60309 1634 aa-0.18□□□□□ -2.44
CHMP2B-202ENST00000466696 KIF13AQ9H1H9 1805 aa-0.18□□□□□ -2.44
CHMP2B-202ENST00000466696 WNK1Q9H4A3 2382 aa-0.18□□□□□ -2.44
CHMP2B-202ENST00000466696 NRXN2Q9P2S2 1712 aa-0.18□□□□□ -2.44
CHMP2B-202ENST00000466696 SYNJ1O43426 1573 aa-0.19□□□□□ -2.44
CHMP2B-202ENST00000466696 TRAV13-2A0A0B4J235 113 aa-0.19□□□□□ -2.44
CHMP2B-202ENST00000466696 SPINK4O60575 86 aa-0.19□□□□□ -2.44
CHMP2B-202ENST00000466696 NBEAP1P0C6P0 100 aa-0.19□□□□□ -2.44
CHMP2B-202ENST00000466696 COX6B1P14854 86 aa-0.19□□□□□ -2.44
CHMP2B-202ENST00000466696 CCL18P55774 89 aa-0.19□□□□□ -2.44
CHMP2B-202ENST00000466696 CKS1BP61024 79 aa-0.19□□□□□ -2.44
CHMP2B-202ENST00000466696 COPZ1P61923 177 aa-0.19□□□□□ -2.44
CHMP2B-202ENST00000466696 SMCO1Q147U7 214 aa-0.19□□□□□ -2.44
CHMP2B-202ENST00000466696 Q6JHZ5 121 aa-0.19□□□□□ -2.44
CHMP2B-202ENST00000466696 TTC9CQ8N5M4 171 aa-0.19□□□□□ -2.44
CHMP2B-202ENST00000466696 PFDN5Q99471 154 aa-0.19□□□□□ -2.44
CHMP2B-202ENST00000466696 PDCD10Q9BUL8 212 aa-0.19□□□□□ -2.44
CHMP2B-202ENST00000466696 CCDC167Q9P0B6 97 aa-0.19□□□□□ -2.44
CHMP2B-202ENST00000466696 WDR7Q9Y4E6 1490 aa-0.19□□□□□ -2.44
CHMP2B-202ENST00000466696 DSTQ03001 7570 aaKnown RBP-0.19□□□□□ -2.44
CHMP2B-202ENST00000466696 PPRC1Q5VV67 1664 aaKnown RBP-0.19□□□□□ -2.44
CHMP2B-202ENST00000466696 LRP2P98164 4655 aa-0.19□□□□□ -2.44
CHMP2B-202ENST00000466696 ZMYM4Q5VZL5 1548 aa-0.19□□□□□ -2.44
CHMP2B-202ENST00000466696 SRRM2Q9UQ35 2752 aaKnown RBP-0.19□□□□□ -2.44
CHMP2B-202ENST00000466696 CHD8Q9HCK8 2581 aa-0.19□□□□□ -2.44
CHMP2B-202ENST00000466696 CASZ1Q86V15 1759 aa-0.19□□□□□ -2.44
CHMP2B-202ENST00000466696 CASKIN1Q8WXD9 1431 aa-0.2□□□□□ -2.44
CHMP2B-202ENST00000466696 CSPG4Q6UVK1 2322 aa-0.2□□□□□ -2.44
CHMP2B-202ENST00000466696 ZNF518AQ6AHZ1 1483 aa-0.2□□□□□ -2.44
CHMP2B-202ENST00000466696 SYS1-DBNDD2H3BUS1 97 aa-0.2□□□□□ -2.44
CHMP2B-202ENST00000466696 TPPP2P59282 170 aa-0.2□□□□□ -2.44
CHMP2B-202ENST00000466696 BAGE2Q86Y30 109 aa-0.2□□□□□ -2.44
CHMP2B-202ENST00000466696 LENEPQ9Y5L5 61 aa-0.2□□□□□ -2.44
CHMP2B-202ENST00000466696 PHIPQ8WWQ0 1821 aa-0.2□□□□□ -2.44
CHMP2B-202ENST00000466696 STAB2Q8WWQ8 2551 aa-0.2□□□□□ -2.44
CHMP2B-202ENST00000466696 DCHS2Q6V1P9 2916 aa-0.2□□□□□ -2.44
CHMP2B-202ENST00000466696 LPAP08519 4548 aa-0.21□□□□□ -2.44
CHMP2B-202ENST00000466696 BCL9LQ86UU0 1499 aa-0.21□□□□□ -2.44
CHMP2B-202ENST00000466696 IFT140Q96RY7 1462 aa-0.21□□□□□ -2.44
CHMP2B-202ENST00000466696 CSMD3Q7Z407 3707 aa-0.21□□□□□ -2.44
CHMP2B-202ENST00000466696 FAM25AB3EWG3 89 aa-0.21□□□□□ -2.44
CHMP2B-202ENST00000466696 FAM25CB3EWG5 89 aa-0.21□□□□□ -2.44
CHMP2B-202ENST00000466696 FAM25GB3EWG6 89 aa-0.21□□□□□ -2.44
CHMP2B-202ENST00000466696 SIX6O95475 246 aa-0.21□□□□□ -2.44
CHMP2B-202ENST00000466696 TSPAN19P0C672 248 aa-0.21□□□□□ -2.44
CHMP2B-202ENST00000466696 LINC00694P0DN24 101 aa-0.21□□□□□ -2.44
CHMP2B-202ENST00000466696 RBM3P98179 157 aaKnown RBP-0.21□□□□□ -2.44
CHMP2B-202ENST00000466696 DR1Q01658 176 aa-0.21□□□□□ -2.44
CHMP2B-202ENST00000466696 C12orf73Q69YU5 71 aa-0.21□□□□□ -2.44
CHMP2B-202ENST00000466696 AKAP14Q86UN6 197 aa-0.21□□□□□ -2.44
CHMP2B-202ENST00000466696 TMEM191AQ9H0A3 160 aa-0.21□□□□□ -2.44
CHMP2B-202ENST00000466696 AGPAT4-IT1Q9H0P7 198 aa-0.21□□□□□ -2.44
CHMP2B-202ENST00000466696 FAIMQ9NVQ4 179 aa-0.21□□□□□ -2.44
CHMP2B-202ENST00000466696 ANKRD30AQ9BXX3 1397 aa-0.21□□□□□ -2.44
CHMP2B-202ENST00000466696 IFT172Q9UG01 1749 aa-0.21□□□□□ -2.44
CHMP2B-202ENST00000466696 SETXQ7Z333 2677 aaKnown RBP-0.21□□□□□ -2.44
CHMP2B-202ENST00000466696 CNOT1A5YKK6 2376 aaKnown RBP-0.21□□□□□ -2.44
CHMP2B-202ENST00000466696 FHAD1B1AJZ9 1412 aa-0.21□□□□□ -2.44
CHMP2B-202ENST00000466696 KMT2AQ03164 3969 aa-0.21□□□□□ -2.44
CHMP2B-202ENST00000466696 HUWE1Q7Z6Z7 4374 aaKnown RBP-0.22□□□□□ -2.44
CHMP2B-202ENST00000466696 POLA1P09884 1462 aaPredicted RBP-0.22□□□□□ -2.44
CHMP2B-202ENST00000466696 MRC1P22897 1456 aa-0.22□□□□□ -2.44
CHMP2B-202ENST00000466696 PKD1L1Q8TDX9 2849 aa-0.22□□□□□ -2.44
CHMP2B-202ENST00000466696 PLXNA2O75051 1894 aa-0.22□□□□□ -2.44
CHMP2B-202ENST00000466696 GOLGA4Q13439 2230 aaKnown RBP-0.22□□□□□ -2.44
CHMP2B-202ENST00000466696 NBEAL1Q6ZS30 2694 aa-0.22□□□□□ -2.44
CHMP2B-202ENST00000466696 CLPSL1A2RUU4 121 aa-0.22□□□□□ -2.44
CHMP2B-202ENST00000466696 HCG22E2RYF7 251 aa-0.22□□□□□ -2.44
CHMP2B-202ENST00000466696 F8VRH5 84 aa-0.22□□□□□ -2.44
CHMP2B-202ENST00000466696 UQCR11O14957 56 aa-0.22□□□□□ -2.44
CHMP2B-202ENST00000466696 PRM1P04553 51 aa-0.22□□□□□ -2.44
CHMP2B-202ENST00000466696 FDCSPQ8NFU4 85 aa-0.22□□□□□ -2.44
CHMP2B-202ENST00000466696 DYNLRB1Q9NP97 96 aa-0.22□□□□□ -2.44
CHMP2B-202ENST00000466696 FLNBO75369 2602 aaKnown RBP-0.22□□□□□ -2.45
CHMP2B-202ENST00000466696 PPIP5K1Q6PFW1 1433 aa-0.22□□□□□ -2.45
CHMP2B-202ENST00000466696 PLXNA1Q9UIW2 1896 aa-0.22□□□□□ -2.45
CHMP2B-202ENST00000466696 PXDNQ92626 1479 aa-0.22□□□□□ -2.45
CHMP2B-202ENST00000466696 MUC12Q9UKN1 5478 aa-0.23□□□□□ -2.45
CHMP2B-202ENST00000466696 MUC2Q02817 5179 aa-0.23□□□□□ -2.45
CHMP2B-202ENST00000466696 LRP6O75581 1613 aa-0.23□□□□□ -2.45
CHMP2B-202ENST00000466696 HECTD4Q9Y4D8 3996 aa-0.23□□□□□ -2.45
CHMP2B-202ENST00000466696 ATRQ13535 2644 aa-0.23□□□□□ -2.45
CHMP2B-202ENST00000466696 USF3Q68DE3 2245 aa-0.23□□□□□ -2.45
CHMP2B-202ENST00000466696 TENM2Q9NT68 2774 aa-0.23□□□□□ -2.45
CHMP2B-202ENST00000466696 LAMB1P07942 1786 aa-0.23□□□□□ -2.45
CHMP2B-202ENST00000466696 LOC285095A0A1B0GVY8 99 aa-0.23□□□□□ -2.45
CHMP2B-202ENST00000466696 COX8AP10176 69 aa-0.23□□□□□ -2.45
CHMP2B-202ENST00000466696 HIST1H1DP16402 221 aaKnown RBP-0.23□□□□□ -2.45
CHMP2B-202ENST00000466696 B2MP61769 119 aa-0.23□□□□□ -2.45
CHMP2B-202ENST00000466696 RPS25P62851 125 aaKnown RBP-0.23□□□□□ -2.45
CHMP2B-202ENST00000466696 UBA52P62987 128 aaKnown RBP-0.23□□□□□ -2.45
CHMP2B-202ENST00000466696 ALX1Q15699 326 aa-0.23□□□□□ -2.45
CHMP2B-202ENST00000466696 KRTAP19-7Q3SYF9 63 aa-0.23□□□□□ -2.45
CHMP2B-202ENST00000466696 SDF2Q99470 211 aa-0.23□□□□□ -2.45
CHMP2B-202ENST00000466696 MGST2Q99735 147 aa-0.23□□□□□ -2.45
CHMP2B-202ENST00000466696 PRG4Q92954 1404 aaPredicted RBP-0.23□□□□□ -2.45
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms