RNA–Protein interactions for RNA: ENST00000463011.5

GPNMB-205, Transcript of glycoprotein nmb, humanhuman

TSL 3

Gene GPNMB, Length 378 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPNMB-205ENST00000463011 VMO1Q7Z5L0 202 aa0.95□□□□□ -2.26
GPNMB-205ENST00000463011 PRR15LQ9BU68 103 aa0.95□□□□□ -2.26
GPNMB-205ENST00000463011 R4GMQ9 66 aa0.95□□□□□ -2.26
GPNMB-205ENST00000463011 V9GYH0 126 aa0.95□□□□□ -2.26
GPNMB-205ENST00000463011 MAP2P11137 1827 aaKnown RBP0.94□□□□□ -2.26
GPNMB-205ENST00000463011 TMEM218A2RU14 115 aa0.94□□□□□ -2.26
GPNMB-205ENST00000463011 DCDP81605 110 aaKnown RBP0.94□□□□□ -2.26
GPNMB-205ENST00000463011 Q6ZRX8 168 aa0.94□□□□□ -2.26
GPNMB-205ENST00000463011 MGST2Q99735 147 aa0.94□□□□□ -2.26
GPNMB-205ENST00000463011 FAM103A1Q9BTL3 118 aaKnown RBP0.94□□□□□ -2.26
GPNMB-205ENST00000463011 NDUFA4L2Q9NRX3 87 aa0.94□□□□□ -2.26
GPNMB-205ENST00000463011 SCAPERQ9BY12 1400 aa0.94□□□□□ -2.26
GPNMB-205ENST00000463011 SSC5DA1L4H1 1573 aa0.93□□□□□ -2.26
GPNMB-205ENST00000463011 GNG11P61952 73 aa0.93□□□□□ -2.26
GPNMB-205ENST00000463011 DYNLRB1Q9NP97 96 aa0.93□□□□□ -2.26
GPNMB-205ENST00000463011 PARP14Q460N5 1801 aa0.93□□□□□ -2.26
GPNMB-205ENST00000463011 ZMYM4Q5VZL5 1548 aa0.93□□□□□ -2.26
GPNMB-205ENST00000463011 ZFYVE16Q7Z3T8 1539 aa0.93□□□□□ -2.26
GPNMB-205ENST00000463011 SIPA1L3O60292 1781 aaPredicted RBP0.93□□□□□ -2.26
GPNMB-205ENST00000463011 SHROOM2Q13796 1616 aa0.93□□□□□ -2.26
GPNMB-205ENST00000463011 GOLGA3Q08378 1498 aa0.92□□□□□ -2.26
GPNMB-205ENST00000463011 PATJQ8NI35 1801 aa0.92□□□□□ -2.26
GPNMB-205ENST00000463011 KMT2BQ9UMN6 2715 aaPredicted RBP0.92□□□□□ -2.26
GPNMB-205ENST00000463011 CTXND1A0A1B0GTU2 59 aa0.92□□□□□ -2.26
GPNMB-205ENST00000463011 M0R135 149 aa0.92□□□□□ -2.26
GPNMB-205ENST00000463011 GCHFRP30047 84 aa0.92□□□□□ -2.26
GPNMB-205ENST00000463011 SNCAP37840 140 aa0.92□□□□□ -2.26
GPNMB-205ENST00000463011 CRCT1Q9UGL9 99 aa0.92□□□□□ -2.26
GPNMB-205ENST00000463011 DOCK1Q14185 1865 aa0.92□□□□□ -2.26
GPNMB-205ENST00000463011 TANC1Q9C0D5 1861 aa0.92□□□□□ -2.26
GPNMB-205ENST00000463011 ARHGAP5Q13017 1502 aa0.91□□□□□ -2.26
GPNMB-205ENST00000463011 TRAV30A0A087WSZ9 112 aa0.91□□□□□ -2.26
GPNMB-205ENST00000463011 CFAP126Q5VTH2 177 aa0.91□□□□□ -2.26
GPNMB-205ENST00000463011 FAM213BQ8TBF2 198 aa0.91□□□□□ -2.26
GPNMB-205ENST00000463011 C10orf95Q9H7T3 257 aa0.91□□□□□ -2.26
GPNMB-205ENST00000463011 CNTLNQ9NXG0 1405 aa0.9□□□□□ -2.26
GPNMB-205ENST00000463011 CC2D2AQ9P2K1 1620 aa0.9□□□□□ -2.26
GPNMB-205ENST00000463011 PRDM2Q13029 1718 aa0.9□□□□□ -2.27
GPNMB-205ENST00000463011 TMEM262E9PQX1 116 aa0.9□□□□□ -2.27
GPNMB-205ENST00000463011 HMGN4O00479 90 aa0.9□□□□□ -2.27
GPNMB-205ENST00000463011 S100A10P60903 97 aa0.9□□□□□ -2.27
GPNMB-205ENST00000463011 KIAA0100Q14667 2235 aaKnown RBP0.9□□□□□ -2.27
GPNMB-205ENST00000463011 ZDBF2Q9HCK1 2354 aa0.9□□□□□ -2.27
GPNMB-205ENST00000463011 SPHKAPQ2M3C7 1700 aa0.89□□□□□ -2.27
GPNMB-205ENST00000463011 IFT172Q9UG01 1749 aa0.89□□□□□ -2.27
GPNMB-205ENST00000463011 G3V318 75 aa0.89□□□□□ -2.27
GPNMB-205ENST00000463011 CHKB-CPT1BH3BT56 60 aa0.89□□□□□ -2.27
GPNMB-205ENST00000463011 H3BQ15 152 aa0.88□□□□□ -2.27
GPNMB-205ENST00000463011 SPINK7P58062 85 aa0.88□□□□□ -2.27
GPNMB-205ENST00000463011 Q5VV11 94 aa0.88□□□□□ -2.27
GPNMB-205ENST00000463011 NPVFQ9HCQ7 196 aa0.88□□□□□ -2.27
GPNMB-205ENST00000463011 MANBALQ9NQG1 85 aa0.88□□□□□ -2.27
GPNMB-205ENST00000463011 UQCR10Q9UDW1 63 aa0.88□□□□□ -2.27
GPNMB-205ENST00000463011 ABCA1O95477 2261 aa0.87□□□□□ -2.27
GPNMB-205ENST00000463011 NAP1L6A6NFF2 107 aa0.87□□□□□ -2.27
GPNMB-205ENST00000463011 F8VRH5 84 aa0.87□□□□□ -2.27
GPNMB-205ENST00000463011 NMBP08949 121 aa0.87□□□□□ -2.27
GPNMB-205ENST00000463011 Q0VG73 95 aa0.87□□□□□ -2.27
GPNMB-205ENST00000463011 SPATA8Q6RVD6 105 aa0.87□□□□□ -2.27
GPNMB-205ENST00000463011 AMELXQ99217 191 aa0.87□□□□□ -2.27
GPNMB-205ENST00000463011 LAMC3Q9Y6N6 1575 aa0.87□□□□□ -2.27
GPNMB-205ENST00000463011 MRC2Q9UBG0 1479 aa0.86□□□□□ -2.27
GPNMB-205ENST00000463011 LOC285095A0A1B0GVY8 99 aa0.86□□□□□ -2.27
GPNMB-205ENST00000463011 IGLC7A0M8Q6 106 aa0.86□□□□□ -2.27
GPNMB-205ENST00000463011 CRYM-AS1A6NIL9 109 aa0.86□□□□□ -2.27
GPNMB-205ENST00000463011 NCMAPQ5T1S8 102 aa0.86□□□□□ -2.27
GPNMB-205ENST00000463011 BAGE2Q86Y30 109 aa0.86□□□□□ -2.27
GPNMB-205ENST00000463011 ACBD7Q8N6N7 88 aa0.86□□□□□ -2.27
GPNMB-205ENST00000463011 SMIM4Q8WVI0 70 aa0.86□□□□□ -2.27
GPNMB-205ENST00000463011 PROK2Q9HC23 129 aa0.86□□□□□ -2.27
GPNMB-205ENST00000463011 AHNAK2Q8IVF2 5795 aa0.86□□□□□ -2.27
GPNMB-205ENST00000463011 TRAV22A0A0B4J277 110 aa0.85□□□□□ -2.27
GPNMB-205ENST00000463011 hADV29S1A0JD25 119 aa0.85□□□□□ -2.27
GPNMB-205ENST00000463011 ABCC5O15440 1437 aa0.85□□□□□ -2.27
GPNMB-205ENST00000463011 TMEM170BQ5T4T1 132 aa0.85□□□□□ -2.27
GPNMB-205ENST00000463011 FAM167A-AS1Q96KT0 104 aa0.85□□□□□ -2.27
GPNMB-205ENST00000463011 MED13LQ71F56 2210 aa0.85□□□□□ -2.27
GPNMB-205ENST00000463011 MYH8P13535 1937 aa0.84□□□□□ -2.27
GPNMB-205ENST00000463011 UQCR11O14957 56 aa0.84□□□□□ -2.27
GPNMB-205ENST00000463011 MPC2O95563 127 aa0.84□□□□□ -2.27
GPNMB-205ENST00000463011 SFTA2Q6UW10 78 aa0.84□□□□□ -2.27
GPNMB-205ENST00000463011 CDC42SE2Q9NRR3 84 aa0.84□□□□□ -2.27
GPNMB-205ENST00000463011 SHANK2Q9UPX8 1470 aa0.84□□□□□ -2.28
GPNMB-205ENST00000463011 DOCK2Q92608 1830 aa0.84□□□□□ -2.28
GPNMB-205ENST00000463011 TET3O43151 1660 aa0.84□□□□□ -2.28
GPNMB-205ENST00000463011 KNTC1P50748 2209 aa0.84□□□□□ -2.28
GPNMB-205ENST00000463011 ZNF609O15014 1411 aa0.83□□□□□ -2.28
GPNMB-205ENST00000463011 F5P12259 2224 aa0.83□□□□□ -2.28
GPNMB-205ENST00000463011 M0R143 59 aa0.83□□□□□ -2.28
GPNMB-205ENST00000463011 GNGT2O14610 69 aa0.83□□□□□ -2.28
GPNMB-205ENST00000463011 SFT2D2O95562 160 aa0.83□□□□□ -2.28
GPNMB-205ENST00000463011 APOC3P02656 99 aa0.83□□□□□ -2.28
GPNMB-205ENST00000463011 S100A8P05109 93 aa0.83□□□□□ -2.28
GPNMB-205ENST00000463011 KRTDAPP60985 99 aa0.83□□□□□ -2.28
GPNMB-205ENST00000463011 UBE2D3P61077 147 aa0.83□□□□□ -2.28
GPNMB-205ENST00000463011 UBE2D2P62837 147 aa0.83□□□□□ -2.28
GPNMB-205ENST00000463011 COX17Q14061 63 aa0.83□□□□□ -2.28
GPNMB-205ENST00000463011 UBE2DNLQ8IWF7 75 aa0.83□□□□□ -2.28
GPNMB-205ENST00000463011 PRO1854Q9UHT4 67 aa0.83□□□□□ -2.28
GPNMB-205ENST00000463011 LINC01558Q9Y6Z2 57 aa0.83□□□□□ -2.28
Retrieved 100 of 20,778 RNA–protein pairs in 54 ms